Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_0774

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_0773 and EX28DRAFT_0774 are separated by 61 nucleotidesEX28DRAFT_0774 and EX28DRAFT_0775 are separated by 102 nucleotides EX28DRAFT_0773: EX28DRAFT_0773 - TonB-dependent siderophore receptor, at 769,874 to 771,976 _0773 EX28DRAFT_0774: EX28DRAFT_0774 - Neutral trehalase, at 772,038 to 773,723 _0774 EX28DRAFT_0775: EX28DRAFT_0775 - AraC-type DNA-binding domain-containing proteins, at 773,826 to 774,782 _0775 Position (kb) 772 773 774Strain fitness (log2 ratio) -2 -1 0 1 2 3at 771.048 kb on - strand, within EX28DRAFT_0773at 771.125 kb on + strand, within EX28DRAFT_0773at 771.126 kb on - strand, within EX28DRAFT_0773at 771.126 kb on - strand, within EX28DRAFT_0773at 771.126 kb on - strand, within EX28DRAFT_0773at 771.142 kb on - strand, within EX28DRAFT_0773at 771.209 kb on + strand, within EX28DRAFT_0773at 771.227 kb on - strand, within EX28DRAFT_0773at 771.407 kb on + strand, within EX28DRAFT_0773at 771.500 kb on + strand, within EX28DRAFT_0773at 771.587 kb on + strand, within EX28DRAFT_0773at 771.587 kb on + strand, within EX28DRAFT_0773at 771.588 kb on - strand, within EX28DRAFT_0773at 771.588 kb on - strand, within EX28DRAFT_0773at 771.588 kb on - strand, within EX28DRAFT_0773at 771.589 kb on + strand, within EX28DRAFT_0773at 771.589 kb on + strand, within EX28DRAFT_0773at 771.589 kb on + strand, within EX28DRAFT_0773at 771.590 kb on - strand, within EX28DRAFT_0773at 771.590 kb on - strand, within EX28DRAFT_0773at 771.590 kb on - strand, within EX28DRAFT_0773at 771.590 kb on - strand, within EX28DRAFT_0773at 771.593 kb on + strand, within EX28DRAFT_0773at 771.593 kb on + strand, within EX28DRAFT_0773at 771.594 kb on - strand, within EX28DRAFT_0773at 771.594 kb on - strand, within EX28DRAFT_0773at 771.626 kb on + strand, within EX28DRAFT_0773at 771.626 kb on + strand, within EX28DRAFT_0773at 771.626 kb on + strand, within EX28DRAFT_0773at 771.627 kb on - strand, within EX28DRAFT_0773at 771.683 kb on + strand, within EX28DRAFT_0773at 771.694 kb on + strand, within EX28DRAFT_0773at 771.800 kb on + strandat 771.890 kb on - strandat 771.909 kb on - strandat 771.948 kb on - strandat 771.967 kb on + strandat 771.974 kb on + strandat 771.975 kb on - strandat 772.040 kb on - strandat 772.231 kb on + strand, within EX28DRAFT_0774at 772.262 kb on - strand, within EX28DRAFT_0774at 772.262 kb on - strand, within EX28DRAFT_0774at 772.262 kb on - strand, within EX28DRAFT_0774at 772.265 kb on + strand, within EX28DRAFT_0774at 772.265 kb on + strand, within EX28DRAFT_0774at 772.265 kb on + strand, within EX28DRAFT_0774at 772.495 kb on + strand, within EX28DRAFT_0774at 772.533 kb on + strand, within EX28DRAFT_0774at 772.555 kb on + strand, within EX28DRAFT_0774at 772.556 kb on - strand, within EX28DRAFT_0774at 772.578 kb on - strand, within EX28DRAFT_0774at 772.784 kb on + strand, within EX28DRAFT_0774at 772.785 kb on - strand, within EX28DRAFT_0774at 772.785 kb on - strand, within EX28DRAFT_0774at 772.853 kb on + strand, within EX28DRAFT_0774at 772.854 kb on - strand, within EX28DRAFT_0774at 773.011 kb on + strand, within EX28DRAFT_0774at 773.011 kb on + strand, within EX28DRAFT_0774at 773.012 kb on - strand, within EX28DRAFT_0774at 773.012 kb on - strand, within EX28DRAFT_0774at 773.116 kb on + strand, within EX28DRAFT_0774at 773.117 kb on - strand, within EX28DRAFT_0774at 773.119 kb on + strand, within EX28DRAFT_0774at 773.120 kb on - strand, within EX28DRAFT_0774at 773.164 kb on + strand, within EX28DRAFT_0774at 773.175 kb on - strand, within EX28DRAFT_0774at 773.236 kb on + strand, within EX28DRAFT_0774at 773.237 kb on - strand, within EX28DRAFT_0774at 773.249 kb on - strand, within EX28DRAFT_0774at 773.251 kb on + strand, within EX28DRAFT_0774at 773.251 kb on + strand, within EX28DRAFT_0774at 773.285 kb on - strand, within EX28DRAFT_0774at 773.405 kb on - strand, within EX28DRAFT_0774at 773.676 kb on + strandat 773.708 kb on + strandat 773.792 kb on + strandat 773.814 kb on - strandat 773.892 kb on - strandat 774.133 kb on + strand, within EX28DRAFT_0775at 774.133 kb on + strand, within EX28DRAFT_0775at 774.516 kb on - strand, within EX28DRAFT_0775at 774.518 kb on + strand, within EX28DRAFT_0775at 774.518 kb on + strand, within EX28DRAFT_0775at 774.518 kb on + strand, within EX28DRAFT_0775at 774.519 kb on - strand, within EX28DRAFT_0775at 774.567 kb on - strand, within EX28DRAFT_0775

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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771,048 - EX28DRAFT_0773 0.56 -0.1
771,125 + EX28DRAFT_0773 0.59 +0.6
771,126 - EX28DRAFT_0773 0.60 +0.2
771,126 - EX28DRAFT_0773 0.60 -0.2
771,126 - EX28DRAFT_0773 0.60 -1.0
771,142 - EX28DRAFT_0773 0.60 -0.5
771,209 + EX28DRAFT_0773 0.63 -1.7
771,227 - EX28DRAFT_0773 0.64 +0.0
771,407 + EX28DRAFT_0773 0.73 +0.3
771,500 + EX28DRAFT_0773 0.77 -0.4
771,587 + EX28DRAFT_0773 0.81 +0.0
771,587 + EX28DRAFT_0773 0.81 +0.3
771,588 - EX28DRAFT_0773 0.82 +0.4
771,588 - EX28DRAFT_0773 0.82 -0.1
771,588 - EX28DRAFT_0773 0.82 -0.7
771,589 + EX28DRAFT_0773 0.82 +0.2
771,589 + EX28DRAFT_0773 0.82 -2.1
771,589 + EX28DRAFT_0773 0.82 +0.3
771,590 - EX28DRAFT_0773 0.82 -1.4
771,590 - EX28DRAFT_0773 0.82 -0.5
771,590 - EX28DRAFT_0773 0.82 -0.4
771,590 - EX28DRAFT_0773 0.82 -0.1
771,593 + EX28DRAFT_0773 0.82 +0.2
771,593 + EX28DRAFT_0773 0.82 -2.0
771,594 - EX28DRAFT_0773 0.82 -0.1
771,594 - EX28DRAFT_0773 0.82 +0.0
771,626 + EX28DRAFT_0773 0.83 +0.3
771,626 + EX28DRAFT_0773 0.83 -2.6
771,626 + EX28DRAFT_0773 0.83 +0.4
771,627 - EX28DRAFT_0773 0.83 +0.1
771,683 + EX28DRAFT_0773 0.86 -0.0
771,694 + EX28DRAFT_0773 0.87 -0.6
771,800 + +1.0
771,890 - -0.4
771,909 - -0.2
771,948 - +0.3
771,967 + -0.4
771,974 + +0.4
771,975 - -0.1
772,040 - +0.5
772,231 + EX28DRAFT_0774 0.11 -0.2
772,262 - EX28DRAFT_0774 0.13 -0.0
772,262 - EX28DRAFT_0774 0.13 +3.0
772,262 - EX28DRAFT_0774 0.13 -0.8
772,265 + EX28DRAFT_0774 0.13 -0.3
772,265 + EX28DRAFT_0774 0.13 +0.1
772,265 + EX28DRAFT_0774 0.13 +0.9
772,495 + EX28DRAFT_0774 0.27 -0.1
772,533 + EX28DRAFT_0774 0.29 +0.1
772,555 + EX28DRAFT_0774 0.31 +0.5
772,556 - EX28DRAFT_0774 0.31 +1.5
772,578 - EX28DRAFT_0774 0.32 +0.1
772,784 + EX28DRAFT_0774 0.44 -0.5
772,785 - EX28DRAFT_0774 0.44 -0.9
772,785 - EX28DRAFT_0774 0.44 -0.3
772,853 + EX28DRAFT_0774 0.48 -0.7
772,854 - EX28DRAFT_0774 0.48 -0.8
773,011 + EX28DRAFT_0774 0.58 -0.5
773,011 + EX28DRAFT_0774 0.58 -0.0
773,012 - EX28DRAFT_0774 0.58 -0.2
773,012 - EX28DRAFT_0774 0.58 -1.0
773,116 + EX28DRAFT_0774 0.64 -2.3
773,117 - EX28DRAFT_0774 0.64 +0.2
773,119 + EX28DRAFT_0774 0.64 -0.3
773,120 - EX28DRAFT_0774 0.64 -0.1
773,164 + EX28DRAFT_0774 0.67 +0.2
773,175 - EX28DRAFT_0774 0.67 +0.6
773,236 + EX28DRAFT_0774 0.71 -1.4
773,237 - EX28DRAFT_0774 0.71 +0.4
773,249 - EX28DRAFT_0774 0.72 +0.0
773,251 + EX28DRAFT_0774 0.72 +0.2
773,251 + EX28DRAFT_0774 0.72 +0.0
773,285 - EX28DRAFT_0774 0.74 +0.4
773,405 - EX28DRAFT_0774 0.81 -2.1
773,676 + +0.9
773,708 + -0.3
773,792 + +0.3
773,814 - +0.7
773,892 - -0.0
774,133 + EX28DRAFT_0775 0.32 +0.5
774,133 + EX28DRAFT_0775 0.32 +0.5
774,516 - EX28DRAFT_0775 0.72 -0.2
774,518 + EX28DRAFT_0775 0.72 +0.2
774,518 + EX28DRAFT_0775 0.72 +0.5
774,518 + EX28DRAFT_0775 0.72 -0.0
774,519 - EX28DRAFT_0775 0.72 -0.5
774,567 - EX28DRAFT_0775 0.77 -0.8

Or see this region's nucleotide sequence