Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0747 and EX28DRAFT_0748 are separated by 52 nucleotides EX28DRAFT_0748 and EX28DRAFT_0749 are separated by 6 nucleotides EX28DRAFT_0749 and EX28DRAFT_0750 are separated by 133 nucleotides EX28DRAFT_0750 and EX28DRAFT_0751 are separated by 66 nucleotides EX28DRAFT_0751 and EX28DRAFT_0752 are separated by 37 nucleotides
EX28DRAFT_0747: EX28DRAFT_0747 - aminodeoxychorismate synthase, component I, bacterial clade, at 745,438 to 746,772
_0747
EX28DRAFT_0748: EX28DRAFT_0748 - Uncharacterized protein conserved in bacteria, at 746,825 to 747,016
_0748
EX28DRAFT_0749: EX28DRAFT_0749 - Putative translation initiation inhibitor, yjgF family, at 747,023 to 747,367
_0749
EX28DRAFT_0750: EX28DRAFT_0750 - Rad3-related DNA helicases, at 747,501 to 749,411
_0750
EX28DRAFT_0751: EX28DRAFT_0751 - tRNA threonylcarbamoyl adenosine modification protein YeaZ, at 749,478 to 750,173
_0751
EX28DRAFT_0752: EX28DRAFT_0752 - outer membrane lipoprotein, Slp family, at 750,211 to 750,792
_0752
Position (kb) 747
748
749
750 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 746.636 kb on + strand, within EX28DRAFT_0747 at 746.676 kb on - strand at 746.736 kb on + strand at 746.736 kb on + strand at 746.737 kb on - strand at 746.739 kb on + strand at 746.739 kb on + strand at 746.739 kb on + strand at 746.740 kb on - strand at 746.772 kb on + strand at 746.773 kb on - strand at 746.773 kb on - strand at 746.773 kb on - strand at 746.773 kb on - strand at 746.773 kb on - strand at 746.773 kb on - strand at 746.838 kb on + strand at 746.839 kb on - strand at 747.014 kb on + strand at 747.015 kb on - strand at 747.055 kb on + strand at 747.055 kb on + strand at 747.056 kb on - strand at 747.323 kb on + strand, within EX28DRAFT_0749 at 747.323 kb on + strand, within EX28DRAFT_0749 at 747.367 kb on + strand at 747.413 kb on + strand at 747.414 kb on - strand at 747.532 kb on + strand at 747.657 kb on + strand at 747.664 kb on - strand at 747.664 kb on - strand at 747.702 kb on - strand, within EX28DRAFT_0750 at 747.739 kb on - strand, within EX28DRAFT_0750 at 747.812 kb on + strand, within EX28DRAFT_0750 at 747.812 kb on + strand, within EX28DRAFT_0750 at 747.812 kb on + strand, within EX28DRAFT_0750 at 747.816 kb on + strand, within EX28DRAFT_0750 at 747.817 kb on - strand, within EX28DRAFT_0750 at 747.817 kb on - strand, within EX28DRAFT_0750 at 748.026 kb on + strand, within EX28DRAFT_0750 at 748.027 kb on - strand, within EX28DRAFT_0750 at 748.027 kb on - strand, within EX28DRAFT_0750 at 748.029 kb on - strand, within EX28DRAFT_0750 at 748.293 kb on - strand, within EX28DRAFT_0750 at 748.455 kb on + strand, within EX28DRAFT_0750 at 748.581 kb on + strand, within EX28DRAFT_0750 at 748.581 kb on + strand, within EX28DRAFT_0750 at 748.969 kb on + strand, within EX28DRAFT_0750 at 749.114 kb on + strand, within EX28DRAFT_0750 at 749.126 kb on + strand, within EX28DRAFT_0750 at 749.127 kb on - strand, within EX28DRAFT_0750 at 749.225 kb on + strand at 749.368 kb on + strand at 749.368 kb on + strand at 749.410 kb on - strand at 749.410 kb on - strand at 750.230 kb on + strand at 750.230 kb on + strand at 750.230 kb on + strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.231 kb on - strand at 750.234 kb on - strand at 750.300 kb on + strand, within EX28DRAFT_0752
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 746,636 + EX28DRAFT_0747 0.90 +0.0 746,676 - -0.1 746,736 + +0.3 746,736 + -0.4 746,737 - -0.4 746,739 + +1.0 746,739 + -0.0 746,739 + +0.3 746,740 - -0.3 746,772 + -0.7 746,773 - +1.0 746,773 - -3.3 746,773 - -0.5 746,773 - +1.1 746,773 - -0.2 746,773 - +1.0 746,838 + +0.5 746,839 - -0.2 747,014 + +0.5 747,015 - -0.1 747,055 + -0.7 747,055 + -1.1 747,056 - +0.9 747,323 + EX28DRAFT_0749 0.87 -0.2 747,323 + EX28DRAFT_0749 0.87 +0.2 747,367 + +1.4 747,413 + +0.0 747,414 - +0.1 747,532 + +0.2 747,657 + +0.2 747,664 - +0.4 747,664 - +0.1 747,702 - EX28DRAFT_0750 0.11 +0.8 747,739 - EX28DRAFT_0750 0.12 +0.3 747,812 + EX28DRAFT_0750 0.16 +0.1 747,812 + EX28DRAFT_0750 0.16 +0.2 747,812 + EX28DRAFT_0750 0.16 -1.9 747,816 + EX28DRAFT_0750 0.16 +0.8 747,817 - EX28DRAFT_0750 0.17 -0.0 747,817 - EX28DRAFT_0750 0.17 +0.6 748,026 + EX28DRAFT_0750 0.27 +1.6 748,027 - EX28DRAFT_0750 0.28 -0.6 748,027 - EX28DRAFT_0750 0.28 +0.3 748,029 - EX28DRAFT_0750 0.28 -0.0 748,293 - EX28DRAFT_0750 0.41 -1.7 748,455 + EX28DRAFT_0750 0.50 +0.1 748,581 + EX28DRAFT_0750 0.57 -0.3 748,581 + EX28DRAFT_0750 0.57 +0.1 748,969 + EX28DRAFT_0750 0.77 +1.0 749,114 + EX28DRAFT_0750 0.84 +0.0 749,126 + EX28DRAFT_0750 0.85 +1.0 749,127 - EX28DRAFT_0750 0.85 +0.6 749,225 + +1.2 749,368 + -0.1 749,368 + +2.0 749,410 - -0.0 749,410 - -0.6 750,230 + -1.2 750,230 + +0.5 750,230 + +0.2 750,231 - +1.3 750,231 - -0.4 750,231 - +0.2 750,231 - +0.0 750,234 - -0.2 750,300 + EX28DRAFT_0752 0.15 +0.6
Or see this region's nucleotide sequence