Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0737 and EX28DRAFT_0738 overlap by 4 nucleotides EX28DRAFT_0738 and EX28DRAFT_0739 are separated by 398 nucleotides EX28DRAFT_0739 and EX28DRAFT_0740 are separated by 54 nucleotides EX28DRAFT_0740 and EX28DRAFT_0741 are separated by 12 nucleotides
EX28DRAFT_0737: EX28DRAFT_0737 - Methyltransferase domain, at 734,579 to 735,394
_0737
EX28DRAFT_0738: EX28DRAFT_0738 - Predicted membrane protein, at 735,391 to 735,957
_0738
EX28DRAFT_0739: EX28DRAFT_0739 - Predicted membrane protein, at 736,356 to 736,814
_0739
EX28DRAFT_0740: EX28DRAFT_0740 - PTS system, mannose/fructose/sorbose family, IID component, at 736,869 to 737,720
_0740
EX28DRAFT_0741: EX28DRAFT_0741 - PTS system, mannose/fructose/sorbose family, IIC component, at 737,733 to 738,533
_0741
Position (kb) 736
737 Strain fitness (log2 ratio) -2
-1
0
1 at 735.497 kb on - strand, within EX28DRAFT_0738 at 735.734 kb on - strand, within EX28DRAFT_0738 at 735.864 kb on + strand, within EX28DRAFT_0738 at 735.984 kb on + strand at 735.985 kb on - strand at 736.022 kb on + strand at 736.026 kb on + strand at 736.027 kb on - strand at 736.027 kb on - strand at 736.053 kb on + strand at 736.054 kb on - strand at 736.054 kb on - strand at 736.169 kb on - strand at 736.532 kb on + strand, within EX28DRAFT_0739 at 736.593 kb on + strand, within EX28DRAFT_0739 at 736.593 kb on + strand, within EX28DRAFT_0739 at 736.611 kb on + strand, within EX28DRAFT_0739 at 736.639 kb on + strand, within EX28DRAFT_0739 at 736.649 kb on + strand, within EX28DRAFT_0739 at 736.753 kb on + strand, within EX28DRAFT_0739 at 736.794 kb on + strand at 736.858 kb on - strand at 736.870 kb on + strand at 736.870 kb on + strand at 736.871 kb on - strand at 737.231 kb on - strand, within EX28DRAFT_0740 at 737.231 kb on - strand, within EX28DRAFT_0740 at 737.491 kb on + strand, within EX28DRAFT_0740 at 737.491 kb on + strand, within EX28DRAFT_0740 at 737.492 kb on - strand, within EX28DRAFT_0740 at 737.492 kb on - strand, within EX28DRAFT_0740 at 737.612 kb on + strand, within EX28DRAFT_0740 at 737.646 kb on - strand at 737.646 kb on - strand at 737.712 kb on - strand at 737.801 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 735,497 - EX28DRAFT_0738 0.19 -0.9 735,734 - EX28DRAFT_0738 0.60 -1.1 735,864 + EX28DRAFT_0738 0.83 -1.6 735,984 + -2.0 735,985 - -1.8 736,022 + -1.2 736,026 + -1.5 736,027 - +0.8 736,027 - -0.6 736,053 + -0.8 736,054 - -0.8 736,054 - -1.4 736,169 - -2.0 736,532 + EX28DRAFT_0739 0.38 -0.4 736,593 + EX28DRAFT_0739 0.52 -0.9 736,593 + EX28DRAFT_0739 0.52 +0.5 736,611 + EX28DRAFT_0739 0.56 -0.1 736,639 + EX28DRAFT_0739 0.62 +1.2 736,649 + EX28DRAFT_0739 0.64 +0.1 736,753 + EX28DRAFT_0739 0.86 -1.5 736,794 + -0.4 736,858 - -0.2 736,870 + -0.5 736,870 + +0.6 736,871 - +1.4 737,231 - EX28DRAFT_0740 0.42 +1.3 737,231 - EX28DRAFT_0740 0.42 +0.2 737,491 + EX28DRAFT_0740 0.73 -0.6 737,491 + EX28DRAFT_0740 0.73 +0.7 737,492 - EX28DRAFT_0740 0.73 -0.4 737,492 - EX28DRAFT_0740 0.73 +0.2 737,612 + EX28DRAFT_0740 0.87 +0.3 737,646 - +0.9 737,646 - +0.5 737,712 - -0.1 737,801 - +0.2
Or see this region's nucleotide sequence