Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0696 and EX28DRAFT_0697 are separated by 59 nucleotides EX28DRAFT_0697 and EX28DRAFT_0698 overlap by 4 nucleotides EX28DRAFT_0698 and EX28DRAFT_0699 are separated by 62 nucleotides
EX28DRAFT_0696: EX28DRAFT_0696 - Holliday junction DNA helicase subunit RuvB, at 692,986 to 693,996
_0696
EX28DRAFT_0697: EX28DRAFT_0697 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 694,056 to 694,841
_0697
EX28DRAFT_0698: EX28DRAFT_0698 - ABC-type Mn/Zn transport systems, ATPase component, at 694,838 to 695,593
_0698
EX28DRAFT_0699: EX28DRAFT_0699 - ABC-type Zn2+ transport system, periplasmic component/surface adhesin, at 695,656 to 696,615
_0699
Position (kb) 694
695 Strain fitness (log2 ratio) -2
-1
0
1 at 693.741 kb on + strand, within EX28DRAFT_0696 at 693.994 kb on + strand at 694.079 kb on + strand at 694.079 kb on + strand at 694.501 kb on + strand, within EX28DRAFT_0697 at 694.577 kb on + strand, within EX28DRAFT_0697 at 694.670 kb on - strand, within EX28DRAFT_0697 at 694.803 kb on - strand at 694.803 kb on - strand at 694.912 kb on - strand at 694.912 kb on - strand at 694.955 kb on - strand, within EX28DRAFT_0698 at 695.003 kb on - strand, within EX28DRAFT_0698 at 695.003 kb on - strand, within EX28DRAFT_0698 at 695.042 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.096 kb on + strand, within EX28DRAFT_0698 at 695.116 kb on - strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.204 kb on + strand, within EX28DRAFT_0698 at 695.410 kb on + strand, within EX28DRAFT_0698 at 695.628 kb on + strand at 695.629 kb on - strand at 695.629 kb on - strand at 695.675 kb on + strand at 695.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 693,741 + EX28DRAFT_0696 0.75 -1.9 693,994 + -0.1 694,079 + -0.4 694,079 + -0.1 694,501 + EX28DRAFT_0697 0.57 -0.3 694,577 + EX28DRAFT_0697 0.66 -0.9 694,670 - EX28DRAFT_0697 0.78 -0.7 694,803 - +0.0 694,803 - -0.7 694,912 - -0.1 694,912 - -0.1 694,955 - EX28DRAFT_0698 0.15 -1.3 695,003 - EX28DRAFT_0698 0.22 -0.1 695,003 - EX28DRAFT_0698 0.22 +0.8 695,042 + EX28DRAFT_0698 0.27 -0.2 695,096 + EX28DRAFT_0698 0.34 +0.2 695,096 + EX28DRAFT_0698 0.34 -0.4 695,096 + EX28DRAFT_0698 0.34 -0.2 695,116 - EX28DRAFT_0698 0.37 +0.7 695,204 + EX28DRAFT_0698 0.48 +0.2 695,204 + EX28DRAFT_0698 0.48 -0.4 695,204 + EX28DRAFT_0698 0.48 -1.6 695,204 + EX28DRAFT_0698 0.48 -2.3 695,410 + EX28DRAFT_0698 0.76 +0.3 695,628 + +1.1 695,629 - +0.3 695,629 - -0.7 695,675 + +0.2 695,724 + +0.4
Or see this region's nucleotide sequence