Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0694 and EX28DRAFT_0695 are separated by 80 nucleotides EX28DRAFT_0695 and EX28DRAFT_0696 are separated by 8 nucleotides EX28DRAFT_0696 and EX28DRAFT_0697 are separated by 59 nucleotides EX28DRAFT_0697 and EX28DRAFT_0698 overlap by 4 nucleotides
EX28DRAFT_0694: EX28DRAFT_0694 - Holliday junction endonuclease RuvC (EC 3.1.22.4), at 691,761 to 692,282
_0694
EX28DRAFT_0695: EX28DRAFT_0695 - Holliday junction DNA helicase subunit RuvA, at 692,363 to 692,977
_0695
EX28DRAFT_0696: EX28DRAFT_0696 - Holliday junction DNA helicase subunit RuvB, at 692,986 to 693,996
_0696
EX28DRAFT_0697: EX28DRAFT_0697 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 694,056 to 694,841
_0697
EX28DRAFT_0698: EX28DRAFT_0698 - ABC-type Mn/Zn transport systems, ATPase component, at 694,838 to 695,593
_0698
Position (kb) 692
693
694 Strain fitness (log2 ratio) -2
-1
0
1 at 692.322 kb on + strand at 692.334 kb on + strand at 692.882 kb on - strand, within EX28DRAFT_0695 at 693.741 kb on + strand, within EX28DRAFT_0696 at 693.994 kb on + strand at 694.079 kb on + strand at 694.079 kb on + strand at 694.501 kb on + strand, within EX28DRAFT_0697 at 694.577 kb on + strand, within EX28DRAFT_0697 at 694.670 kb on - strand, within EX28DRAFT_0697 at 694.803 kb on - strand at 694.803 kb on - strand at 694.912 kb on - strand at 694.912 kb on - strand at 694.955 kb on - strand, within EX28DRAFT_0698
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 692,322 + +0.4 692,334 + +0.1 692,882 - EX28DRAFT_0695 0.84 -1.4 693,741 + EX28DRAFT_0696 0.75 -1.9 693,994 + -0.1 694,079 + -0.4 694,079 + -0.1 694,501 + EX28DRAFT_0697 0.57 -0.3 694,577 + EX28DRAFT_0697 0.66 -0.9 694,670 - EX28DRAFT_0697 0.78 -0.7 694,803 - +0.0 694,803 - -0.7 694,912 - -0.1 694,912 - -0.1 694,955 - EX28DRAFT_0698 0.15 -1.3
Or see this region's nucleotide sequence