Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0686 and EX28DRAFT_0687 overlap by 4 nucleotides EX28DRAFT_0687 and EX28DRAFT_0688 are separated by 40 nucleotides EX28DRAFT_0688 and EX28DRAFT_0689 are separated by 51 nucleotides
EX28DRAFT_0686: EX28DRAFT_0686 - tRNA (mo5U34)-methyltransferase, at 684,897 to 685,868
_0686
EX28DRAFT_0687: EX28DRAFT_0687 - tRNA (cmo5U34)-methyltransferase, at 685,865 to 686,608
_0687
EX28DRAFT_0688: EX28DRAFT_0688 - Uncharacterized relative of glutathione S-transferase, MAPEG superfamily, at 686,649 to 687,044
_0688
EX28DRAFT_0689: EX28DRAFT_0689 - Uncharacterized conserved protein, at 687,096 to 687,914
_0689
Position (kb) 685
686
687 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 685.271 kb on - strand, within EX28DRAFT_0686 at 685.493 kb on + strand, within EX28DRAFT_0686 at 685.494 kb on - strand, within EX28DRAFT_0686 at 685.494 kb on - strand, within EX28DRAFT_0686 at 686.041 kb on - strand, within EX28DRAFT_0687 at 686.482 kb on + strand, within EX28DRAFT_0687 at 686.482 kb on + strand, within EX28DRAFT_0687 at 686.483 kb on - strand, within EX28DRAFT_0687 at 686.640 kb on + strand at 686.641 kb on - strand at 686.681 kb on + strand at 686.681 kb on + strand at 686.682 kb on - strand at 686.683 kb on + strand at 686.683 kb on + strand at 686.683 kb on + strand at 686.683 kb on + strand at 686.684 kb on - strand at 686.684 kb on - strand at 686.684 kb on - strand at 686.684 kb on - strand at 686.780 kb on - strand, within EX28DRAFT_0688 at 686.780 kb on - strand, within EX28DRAFT_0688 at 686.801 kb on + strand, within EX28DRAFT_0688 at 686.855 kb on + strand, within EX28DRAFT_0688 at 686.872 kb on - strand, within EX28DRAFT_0688 at 687.019 kb on - strand at 687.044 kb on + strand at 687.044 kb on + strand at 687.045 kb on - strand at 687.080 kb on - strand at 687.227 kb on - strand, within EX28DRAFT_0689
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 685,271 - EX28DRAFT_0686 0.38 -0.7 685,493 + EX28DRAFT_0686 0.61 +0.4 685,494 - EX28DRAFT_0686 0.61 +0.8 685,494 - EX28DRAFT_0686 0.61 -0.9 686,041 - EX28DRAFT_0687 0.24 -0.8 686,482 + EX28DRAFT_0687 0.83 +1.7 686,482 + EX28DRAFT_0687 0.83 -2.3 686,483 - EX28DRAFT_0687 0.83 -0.5 686,640 + -1.0 686,641 - +0.6 686,681 + +0.8 686,681 + -1.6 686,682 - -1.0 686,683 + +0.6 686,683 + -2.0 686,683 + +1.1 686,683 + +0.2 686,684 - +0.5 686,684 - +1.0 686,684 - -1.0 686,684 - +0.4 686,780 - EX28DRAFT_0688 0.33 -1.3 686,780 - EX28DRAFT_0688 0.33 -0.7 686,801 + EX28DRAFT_0688 0.38 +0.6 686,855 + EX28DRAFT_0688 0.52 -0.7 686,872 - EX28DRAFT_0688 0.56 -0.1 687,019 - -3.0 687,044 + +0.4 687,044 + -2.0 687,045 - -0.2 687,080 - +0.2 687,227 - EX28DRAFT_0689 0.16 +0.8
Or see this region's nucleotide sequence