Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0670 and EX28DRAFT_0671 are separated by 44 nucleotides EX28DRAFT_0671 and EX28DRAFT_0672 are separated by 19 nucleotides EX28DRAFT_0672 and EX28DRAFT_0673 overlap by 4 nucleotides
EX28DRAFT_0670: EX28DRAFT_0670 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 665,693 to 667,360
_0670
EX28DRAFT_0671: EX28DRAFT_0671 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 667,405 to 669,006
_0671
EX28DRAFT_0672: EX28DRAFT_0672 - Methylase of chemotaxis methyl-accepting proteins, at 669,026 to 669,892
_0672
EX28DRAFT_0673: EX28DRAFT_0673 - Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain, at 669,889 to 670,938
_0673
Position (kb) 667
668
669
670 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 666.460 kb on + strand, within EX28DRAFT_0670 at 666.460 kb on + strand, within EX28DRAFT_0670 at 666.460 kb on + strand, within EX28DRAFT_0670 at 666.518 kb on + strand, within EX28DRAFT_0670 at 666.518 kb on + strand, within EX28DRAFT_0670 at 666.518 kb on + strand, within EX28DRAFT_0670 at 666.518 kb on + strand, within EX28DRAFT_0670 at 666.518 kb on + strand, within EX28DRAFT_0670 at 666.519 kb on - strand, within EX28DRAFT_0670 at 666.519 kb on - strand, within EX28DRAFT_0670 at 666.519 kb on - strand, within EX28DRAFT_0670 at 666.519 kb on - strand, within EX28DRAFT_0670 at 666.894 kb on + strand, within EX28DRAFT_0670 at 666.894 kb on + strand, within EX28DRAFT_0670 at 666.894 kb on + strand, within EX28DRAFT_0670 at 666.895 kb on - strand, within EX28DRAFT_0670 at 666.895 kb on - strand, within EX28DRAFT_0670 at 666.895 kb on - strand, within EX28DRAFT_0670 at 667.278 kb on - strand at 667.422 kb on + strand at 667.653 kb on + strand, within EX28DRAFT_0671 at 667.789 kb on + strand, within EX28DRAFT_0671 at 667.790 kb on - strand, within EX28DRAFT_0671 at 667.894 kb on - strand, within EX28DRAFT_0671 at 667.911 kb on + strand, within EX28DRAFT_0671 at 667.957 kb on + strand, within EX28DRAFT_0671 at 667.957 kb on + strand, within EX28DRAFT_0671 at 668.215 kb on + strand, within EX28DRAFT_0671 at 668.475 kb on - strand, within EX28DRAFT_0671 at 668.937 kb on + strand at 668.963 kb on + strand at 668.963 kb on + strand at 669.010 kb on + strand at 669.011 kb on - strand at 669.011 kb on - strand at 669.014 kb on + strand at 669.015 kb on - strand at 669.015 kb on - strand at 669.025 kb on + strand at 669.115 kb on - strand, within EX28DRAFT_0672 at 669.160 kb on + strand, within EX28DRAFT_0672 at 669.160 kb on + strand, within EX28DRAFT_0672 at 669.176 kb on + strand, within EX28DRAFT_0672 at 669.177 kb on - strand, within EX28DRAFT_0672 at 669.281 kb on - strand, within EX28DRAFT_0672 at 669.374 kb on + strand, within EX28DRAFT_0672 at 669.619 kb on - strand, within EX28DRAFT_0672 at 669.677 kb on + strand, within EX28DRAFT_0672 at 669.677 kb on + strand, within EX28DRAFT_0672 at 669.796 kb on - strand, within EX28DRAFT_0672 at 669.866 kb on + strand at 669.867 kb on - strand at 669.867 kb on - strand at 669.867 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 666,460 + EX28DRAFT_0670 0.46 +0.1 666,460 + EX28DRAFT_0670 0.46 -0.5 666,460 + EX28DRAFT_0670 0.46 +0.4 666,518 + EX28DRAFT_0670 0.49 +0.5 666,518 + EX28DRAFT_0670 0.49 -0.1 666,518 + EX28DRAFT_0670 0.49 +1.3 666,518 + EX28DRAFT_0670 0.49 +0.3 666,518 + EX28DRAFT_0670 0.49 -0.2 666,519 - EX28DRAFT_0670 0.50 +1.5 666,519 - EX28DRAFT_0670 0.50 +0.2 666,519 - EX28DRAFT_0670 0.50 +0.2 666,519 - EX28DRAFT_0670 0.50 +0.5 666,894 + EX28DRAFT_0670 0.72 +1.1 666,894 + EX28DRAFT_0670 0.72 +0.2 666,894 + EX28DRAFT_0670 0.72 +0.4 666,895 - EX28DRAFT_0670 0.72 -0.5 666,895 - EX28DRAFT_0670 0.72 +0.3 666,895 - EX28DRAFT_0670 0.72 +0.1 667,278 - -0.5 667,422 + +0.2 667,653 + EX28DRAFT_0671 0.15 +0.3 667,789 + EX28DRAFT_0671 0.24 -1.7 667,790 - EX28DRAFT_0671 0.24 +0.0 667,894 - EX28DRAFT_0671 0.31 -0.5 667,911 + EX28DRAFT_0671 0.32 +0.3 667,957 + EX28DRAFT_0671 0.34 -0.5 667,957 + EX28DRAFT_0671 0.34 -0.8 668,215 + EX28DRAFT_0671 0.51 +0.0 668,475 - EX28DRAFT_0671 0.67 -3.3 668,937 + +0.4 668,963 + +0.1 668,963 + +0.5 669,010 + -0.3 669,011 - +0.1 669,011 - +0.2 669,014 + +0.6 669,015 - +0.2 669,015 - -3.0 669,025 + +0.3 669,115 - EX28DRAFT_0672 0.10 +0.1 669,160 + EX28DRAFT_0672 0.15 -0.1 669,160 + EX28DRAFT_0672 0.15 +0.3 669,176 + EX28DRAFT_0672 0.17 -0.1 669,177 - EX28DRAFT_0672 0.17 -0.4 669,281 - EX28DRAFT_0672 0.29 -0.5 669,374 + EX28DRAFT_0672 0.40 -0.2 669,619 - EX28DRAFT_0672 0.68 +0.1 669,677 + EX28DRAFT_0672 0.75 +0.4 669,677 + EX28DRAFT_0672 0.75 -1.1 669,796 - EX28DRAFT_0672 0.89 -0.9 669,866 + +0.7 669,867 - -0.2 669,867 - +0.3 669,867 - -0.1
Or see this region's nucleotide sequence