Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0578 and EX28DRAFT_0579 are separated by 215 nucleotides EX28DRAFT_0579 and EX28DRAFT_0580 overlap by 4 nucleotides
EX28DRAFT_0578: EX28DRAFT_0578 - Uncharacterized protein conserved in bacteria, at 576,991 to 577,788
_0578
EX28DRAFT_0579: EX28DRAFT_0579 - Uncharacterized protein conserved in bacteria (DUF2256), at 578,004 to 578,150
_0579
EX28DRAFT_0580: EX28DRAFT_0580 - Uncharacterized protein related to deoxyribodipyrimidine photolyase, at 578,147 to 579,676
_0580
Position (kb) 578
579 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 577.359 kb on + strand, within EX28DRAFT_0578 at 577.515 kb on + strand, within EX28DRAFT_0578 at 577.515 kb on + strand, within EX28DRAFT_0578 at 577.515 kb on + strand, within EX28DRAFT_0578 at 577.516 kb on - strand, within EX28DRAFT_0578 at 577.696 kb on - strand, within EX28DRAFT_0578 at 577.784 kb on - strand at 577.843 kb on - strand at 577.885 kb on + strand at 577.890 kb on + strand at 577.891 kb on - strand at 577.899 kb on + strand at 577.900 kb on - strand at 577.995 kb on - strand at 578.116 kb on - strand, within EX28DRAFT_0579 at 578.116 kb on - strand, within EX28DRAFT_0579 at 578.229 kb on - strand at 578.229 kb on - strand at 578.473 kb on + strand, within EX28DRAFT_0580 at 578.634 kb on + strand, within EX28DRAFT_0580 at 578.635 kb on - strand, within EX28DRAFT_0580 at 578.751 kb on - strand, within EX28DRAFT_0580 at 578.869 kb on + strand, within EX28DRAFT_0580 at 579.099 kb on - strand, within EX28DRAFT_0580
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 577,359 + EX28DRAFT_0578 0.46 -0.2 577,515 + EX28DRAFT_0578 0.66 -0.1 577,515 + EX28DRAFT_0578 0.66 -0.7 577,515 + EX28DRAFT_0578 0.66 -0.0 577,516 - EX28DRAFT_0578 0.66 -0.6 577,696 - EX28DRAFT_0578 0.88 -1.1 577,784 - +0.3 577,843 - -0.6 577,885 + -0.1 577,890 + +0.3 577,891 - +0.4 577,899 + -0.5 577,900 - +0.6 577,995 - +0.2 578,116 - EX28DRAFT_0579 0.76 +1.6 578,116 - EX28DRAFT_0579 0.76 +0.3 578,229 - -0.2 578,229 - -0.3 578,473 + EX28DRAFT_0580 0.21 +0.1 578,634 + EX28DRAFT_0580 0.32 +0.3 578,635 - EX28DRAFT_0580 0.32 -3.3 578,751 - EX28DRAFT_0580 0.39 +0.3 578,869 + EX28DRAFT_0580 0.47 +0.4 579,099 - EX28DRAFT_0580 0.62 -0.7
Or see this region's nucleotide sequence