Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0529 and EX28DRAFT_0530 are separated by 226 nucleotides EX28DRAFT_0530 and EX28DRAFT_0531 are separated by 52 nucleotides
EX28DRAFT_0529: EX28DRAFT_0529 - 6-phosphogluconate dehydrogenase (decarboxylating), at 523,019 to 524,425
_0529
EX28DRAFT_0530: EX28DRAFT_0530 - nucleotide sugar dehydrogenase, at 524,652 to 525,818
_0530
EX28DRAFT_0531: EX28DRAFT_0531 - Nucleoside-diphosphate-sugar epimerases, at 525,871 to 526,875
_0531
Position (kb) 524
525
526 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 523.880 kb on + strand, within EX28DRAFT_0529 at 524.192 kb on + strand, within EX28DRAFT_0529 at 524.193 kb on - strand, within EX28DRAFT_0529 at 524.371 kb on + strand at 524.375 kb on + strand at 524.408 kb on - strand at 524.423 kb on + strand at 524.428 kb on + strand at 524.507 kb on - strand at 524.507 kb on - strand at 524.536 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.591 kb on + strand at 524.592 kb on - strand at 525.960 kb on - strand at 526.103 kb on + strand, within EX28DRAFT_0531 at 526.176 kb on + strand, within EX28DRAFT_0531 at 526.177 kb on - strand, within EX28DRAFT_0531 at 526.195 kb on - strand, within EX28DRAFT_0531 at 526.220 kb on + strand, within EX28DRAFT_0531 at 526.221 kb on - strand, within EX28DRAFT_0531 at 526.248 kb on - strand, within EX28DRAFT_0531 at 526.251 kb on + strand, within EX28DRAFT_0531 at 526.253 kb on + strand, within EX28DRAFT_0531 at 526.290 kb on + strand, within EX28DRAFT_0531 at 526.291 kb on - strand, within EX28DRAFT_0531 at 526.296 kb on + strand, within EX28DRAFT_0531 at 526.331 kb on + strand, within EX28DRAFT_0531 at 526.371 kb on - strand, within EX28DRAFT_0531 at 526.371 kb on - strand, within EX28DRAFT_0531 at 526.383 kb on - strand, within EX28DRAFT_0531 at 526.489 kb on + strand, within EX28DRAFT_0531 at 526.793 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 523,880 + EX28DRAFT_0529 0.61 -1.8 524,192 + EX28DRAFT_0529 0.83 -1.2 524,193 - EX28DRAFT_0529 0.83 -3.2 524,371 + -1.3 524,375 + -4.0 524,408 - +1.8 524,423 + -0.1 524,428 + -1.1 524,507 - -2.8 524,507 - +0.0 524,536 + -1.1 524,591 + -0.0 524,591 + +1.5 524,591 + +0.4 524,591 + -1.8 524,591 + -1.2 524,592 - -2.6 525,960 - -2.7 526,103 + EX28DRAFT_0531 0.23 -0.2 526,176 + EX28DRAFT_0531 0.30 -1.7 526,177 - EX28DRAFT_0531 0.30 -2.5 526,195 - EX28DRAFT_0531 0.32 -2.2 526,220 + EX28DRAFT_0531 0.35 -3.3 526,221 - EX28DRAFT_0531 0.35 -0.9 526,248 - EX28DRAFT_0531 0.38 -3.3 526,251 + EX28DRAFT_0531 0.38 -0.6 526,253 + EX28DRAFT_0531 0.38 -2.2 526,290 + EX28DRAFT_0531 0.42 -4.5 526,291 - EX28DRAFT_0531 0.42 -1.1 526,296 + EX28DRAFT_0531 0.42 -2.0 526,331 + EX28DRAFT_0531 0.46 -2.2 526,371 - EX28DRAFT_0531 0.50 +1.2 526,371 - EX28DRAFT_0531 0.50 -1.8 526,383 - EX28DRAFT_0531 0.51 -1.8 526,489 + EX28DRAFT_0531 0.61 -1.4 526,793 - -4.0
Or see this region's nucleotide sequence