Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0441 and EX28DRAFT_0442 overlap by 26 nucleotides EX28DRAFT_0442 and EX28DRAFT_0443 are separated by 487 nucleotides EX28DRAFT_0443 and EX28DRAFT_0444 overlap by 1 nucleotides EX28DRAFT_0444 and EX28DRAFT_0445 overlap by 1 nucleotides
EX28DRAFT_0441: EX28DRAFT_0441 - Acetyltransferases, at 422,753 to 423,208
_0441
EX28DRAFT_0442: EX28DRAFT_0442 - Predicted integral membrane protein, at 423,183 to 423,515
_0442
EX28DRAFT_0443: EX28DRAFT_0443 - Periplasmic protein involved in polysaccharide export, at 424,003 to 425,143
_0443
EX28DRAFT_0444: EX28DRAFT_0444 - Protein-tyrosine-phosphatase, at 425,143 to 425,592
_0444
EX28DRAFT_0445: EX28DRAFT_0445 - capsular exopolysaccharide family, at 425,592 to 427,772
_0445
Position (kb) 424
425
426 Strain fitness (log2 ratio) -1
0
1
2 at 423.200 kb on + strand at 423.200 kb on + strand at 423.200 kb on + strand at 423.212 kb on - strand at 423.253 kb on + strand, within EX28DRAFT_0442 at 423.253 kb on + strand, within EX28DRAFT_0442 at 423.253 kb on + strand, within EX28DRAFT_0442 at 423.253 kb on + strand, within EX28DRAFT_0442 at 423.254 kb on - strand, within EX28DRAFT_0442 at 423.254 kb on - strand, within EX28DRAFT_0442 at 423.268 kb on + strand, within EX28DRAFT_0442 at 423.268 kb on + strand, within EX28DRAFT_0442 at 423.269 kb on - strand, within EX28DRAFT_0442 at 423.269 kb on - strand, within EX28DRAFT_0442 at 423.269 kb on - strand, within EX28DRAFT_0442 at 423.269 kb on - strand, within EX28DRAFT_0442 at 423.309 kb on + strand, within EX28DRAFT_0442 at 423.310 kb on - strand, within EX28DRAFT_0442 at 423.310 kb on - strand, within EX28DRAFT_0442 at 423.316 kb on + strand, within EX28DRAFT_0442 at 423.331 kb on + strand, within EX28DRAFT_0442 at 423.412 kb on + strand, within EX28DRAFT_0442 at 423.413 kb on - strand, within EX28DRAFT_0442 at 423.480 kb on + strand, within EX28DRAFT_0442 at 423.481 kb on - strand, within EX28DRAFT_0442 at 423.483 kb on + strand at 423.484 kb on - strand at 423.484 kb on - strand at 423.491 kb on + strand at 423.593 kb on - strand at 423.606 kb on - strand at 423.800 kb on + strand at 423.821 kb on + strand at 423.822 kb on - strand at 423.887 kb on + strand at 424.332 kb on + strand, within EX28DRAFT_0443 at 424.332 kb on + strand, within EX28DRAFT_0443 at 424.371 kb on + strand, within EX28DRAFT_0443 at 424.382 kb on - strand, within EX28DRAFT_0443 at 424.395 kb on + strand, within EX28DRAFT_0443 at 424.519 kb on + strand, within EX28DRAFT_0443 at 424.519 kb on + strand, within EX28DRAFT_0443 at 424.520 kb on - strand, within EX28DRAFT_0443 at 424.520 kb on - strand, within EX28DRAFT_0443 at 424.520 kb on - strand, within EX28DRAFT_0443 at 424.632 kb on + strand, within EX28DRAFT_0443 at 424.680 kb on + strand, within EX28DRAFT_0443 at 424.681 kb on - strand, within EX28DRAFT_0443 at 424.681 kb on - strand, within EX28DRAFT_0443 at 424.801 kb on - strand, within EX28DRAFT_0443 at 424.873 kb on + strand, within EX28DRAFT_0443 at 424.915 kb on + strand, within EX28DRAFT_0443 at 424.915 kb on + strand, within EX28DRAFT_0443 at 424.916 kb on - strand, within EX28DRAFT_0443 at 424.945 kb on + strand, within EX28DRAFT_0443 at 424.949 kb on + strand, within EX28DRAFT_0443 at 424.949 kb on + strand, within EX28DRAFT_0443 at 424.950 kb on - strand, within EX28DRAFT_0443 at 425.012 kb on + strand, within EX28DRAFT_0443 at 425.025 kb on - strand, within EX28DRAFT_0443 at 425.025 kb on - strand, within EX28DRAFT_0443 at 425.120 kb on + strand at 425.141 kb on + strand at 425.142 kb on - strand at 425.178 kb on + strand at 425.238 kb on + strand, within EX28DRAFT_0444 at 425.519 kb on - strand, within EX28DRAFT_0444 at 425.519 kb on - strand, within EX28DRAFT_0444 at 425.519 kb on - strand, within EX28DRAFT_0444 at 425.591 kb on - strand at 425.604 kb on - strand at 425.616 kb on + strand at 425.616 kb on + strand at 425.616 kb on + strand at 425.616 kb on + strand at 425.616 kb on + strand at 425.616 kb on + strand at 425.617 kb on - strand at 425.619 kb on - strand at 425.915 kb on - strand, within EX28DRAFT_0445 at 425.925 kb on + strand, within EX28DRAFT_0445 at 425.925 kb on + strand, within EX28DRAFT_0445 at 425.925 kb on + strand, within EX28DRAFT_0445 at 425.926 kb on - strand, within EX28DRAFT_0445 at 425.926 kb on - strand, within EX28DRAFT_0445 at 425.987 kb on + strand, within EX28DRAFT_0445 at 425.988 kb on - strand, within EX28DRAFT_0445 at 426.001 kb on + strand, within EX28DRAFT_0445 at 426.002 kb on - strand, within EX28DRAFT_0445
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 423,200 + +1.8 423,200 + +0.6 423,200 + -0.1 423,212 - +0.3 423,253 + EX28DRAFT_0442 0.21 +0.9 423,253 + EX28DRAFT_0442 0.21 -0.1 423,253 + EX28DRAFT_0442 0.21 -0.2 423,253 + EX28DRAFT_0442 0.21 +0.3 423,254 - EX28DRAFT_0442 0.21 -0.7 423,254 - EX28DRAFT_0442 0.21 +0.5 423,268 + EX28DRAFT_0442 0.26 +0.3 423,268 + EX28DRAFT_0442 0.26 +0.4 423,269 - EX28DRAFT_0442 0.26 -0.4 423,269 - EX28DRAFT_0442 0.26 -0.1 423,269 - EX28DRAFT_0442 0.26 +0.8 423,269 - EX28DRAFT_0442 0.26 +0.5 423,309 + EX28DRAFT_0442 0.38 +1.5 423,310 - EX28DRAFT_0442 0.38 -1.2 423,310 - EX28DRAFT_0442 0.38 +0.3 423,316 + EX28DRAFT_0442 0.40 +0.1 423,331 + EX28DRAFT_0442 0.44 -0.1 423,412 + EX28DRAFT_0442 0.69 -0.2 423,413 - EX28DRAFT_0442 0.69 -0.1 423,480 + EX28DRAFT_0442 0.89 +0.5 423,481 - EX28DRAFT_0442 0.89 -1.0 423,483 + -0.2 423,484 - +0.7 423,484 - -0.0 423,491 + -1.1 423,593 - -1.0 423,606 - -0.2 423,800 + -1.0 423,821 + +1.6 423,822 - -1.2 423,887 + -0.0 424,332 + EX28DRAFT_0443 0.29 -1.1 424,332 + EX28DRAFT_0443 0.29 +0.4 424,371 + EX28DRAFT_0443 0.32 +0.2 424,382 - EX28DRAFT_0443 0.33 +0.4 424,395 + EX28DRAFT_0443 0.34 +0.0 424,519 + EX28DRAFT_0443 0.45 -0.9 424,519 + EX28DRAFT_0443 0.45 +0.5 424,520 - EX28DRAFT_0443 0.45 -0.3 424,520 - EX28DRAFT_0443 0.45 -0.5 424,520 - EX28DRAFT_0443 0.45 +0.4 424,632 + EX28DRAFT_0443 0.55 -0.2 424,680 + EX28DRAFT_0443 0.59 +0.2 424,681 - EX28DRAFT_0443 0.59 +0.5 424,681 - EX28DRAFT_0443 0.59 -0.1 424,801 - EX28DRAFT_0443 0.70 -0.3 424,873 + EX28DRAFT_0443 0.76 +0.4 424,915 + EX28DRAFT_0443 0.80 +0.3 424,915 + EX28DRAFT_0443 0.80 -0.8 424,916 - EX28DRAFT_0443 0.80 +2.2 424,945 + EX28DRAFT_0443 0.83 +0.3 424,949 + EX28DRAFT_0443 0.83 +0.3 424,949 + EX28DRAFT_0443 0.83 +0.3 424,950 - EX28DRAFT_0443 0.83 +0.4 425,012 + EX28DRAFT_0443 0.88 +1.2 425,025 - EX28DRAFT_0443 0.90 +0.2 425,025 - EX28DRAFT_0443 0.90 -0.2 425,120 + +1.4 425,141 + +0.4 425,142 - +1.1 425,178 + -0.0 425,238 + EX28DRAFT_0444 0.21 +0.7 425,519 - EX28DRAFT_0444 0.84 -1.6 425,519 - EX28DRAFT_0444 0.84 +0.1 425,519 - EX28DRAFT_0444 0.84 +1.3 425,591 - +1.4 425,604 - -0.3 425,616 + -0.6 425,616 + +0.6 425,616 + +0.1 425,616 + +0.7 425,616 + +0.1 425,616 + +0.1 425,617 - +0.2 425,619 - -1.3 425,915 - EX28DRAFT_0445 0.15 +0.8 425,925 + EX28DRAFT_0445 0.15 -0.3 425,925 + EX28DRAFT_0445 0.15 +1.6 425,925 + EX28DRAFT_0445 0.15 +0.5 425,926 - EX28DRAFT_0445 0.15 +0.5 425,926 - EX28DRAFT_0445 0.15 +0.7 425,987 + EX28DRAFT_0445 0.18 -0.5 425,988 - EX28DRAFT_0445 0.18 -0.3 426,001 + EX28DRAFT_0445 0.19 -0.5 426,002 - EX28DRAFT_0445 0.19 -0.5
Or see this region's nucleotide sequence