Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0410 and EX28DRAFT_0411 are separated by 124 nucleotides EX28DRAFT_0411 and EX28DRAFT_0412 are separated by 126 nucleotides
EX28DRAFT_0410: EX28DRAFT_0410 - Glutamine synthetase, at 388,051 to 389,439
_0410
EX28DRAFT_0411: EX28DRAFT_0411 - Uncharacterized membrane protein, at 389,564 to 390,280
_0411
EX28DRAFT_0412: EX28DRAFT_0412 - cytidine deaminase (EC 3.5.4.5), at 390,407 to 391,291
_0412
Position (kb) 389
390
391 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 388.747 kb on + strand, within EX28DRAFT_0410 at 388.755 kb on - strand, within EX28DRAFT_0410 at 388.855 kb on - strand, within EX28DRAFT_0410 at 388.858 kb on - strand, within EX28DRAFT_0410 at 388.858 kb on - strand, within EX28DRAFT_0410 at 388.985 kb on - strand, within EX28DRAFT_0410 at 389.013 kb on + strand, within EX28DRAFT_0410 at 389.266 kb on + strand, within EX28DRAFT_0410 at 389.266 kb on + strand, within EX28DRAFT_0410 at 389.266 kb on + strand, within EX28DRAFT_0410 at 389.267 kb on - strand, within EX28DRAFT_0410 at 389.386 kb on + strand at 389.440 kb on + strand at 389.441 kb on - strand at 389.494 kb on - strand at 389.549 kb on - strand at 389.550 kb on + strand at 389.551 kb on - strand at 389.566 kb on - strand at 389.585 kb on - strand at 389.672 kb on + strand, within EX28DRAFT_0411 at 389.700 kb on + strand, within EX28DRAFT_0411 at 389.700 kb on + strand, within EX28DRAFT_0411 at 389.701 kb on - strand, within EX28DRAFT_0411 at 389.759 kb on - strand, within EX28DRAFT_0411 at 389.781 kb on + strand, within EX28DRAFT_0411 at 389.804 kb on - strand, within EX28DRAFT_0411 at 390.030 kb on + strand, within EX28DRAFT_0411 at 390.030 kb on + strand, within EX28DRAFT_0411 at 390.030 kb on + strand, within EX28DRAFT_0411 at 390.051 kb on + strand, within EX28DRAFT_0411 at 390.052 kb on - strand, within EX28DRAFT_0411 at 390.088 kb on - strand, within EX28DRAFT_0411 at 390.114 kb on + strand, within EX28DRAFT_0411 at 390.115 kb on - strand, within EX28DRAFT_0411 at 390.180 kb on + strand, within EX28DRAFT_0411 at 390.181 kb on - strand, within EX28DRAFT_0411 at 390.237 kb on - strand at 390.237 kb on - strand at 390.318 kb on + strand at 390.419 kb on + strand at 390.675 kb on + strand, within EX28DRAFT_0412 at 390.814 kb on - strand, within EX28DRAFT_0412 at 390.814 kb on - strand, within EX28DRAFT_0412 at 390.887 kb on - strand, within EX28DRAFT_0412 at 390.887 kb on - strand, within EX28DRAFT_0412 at 390.915 kb on + strand, within EX28DRAFT_0412 at 390.916 kb on - strand, within EX28DRAFT_0412 at 390.916 kb on - strand, within EX28DRAFT_0412 at 391.024 kb on + strand, within EX28DRAFT_0412 at 391.038 kb on + strand, within EX28DRAFT_0412 at 391.038 kb on + strand, within EX28DRAFT_0412 at 391.038 kb on + strand, within EX28DRAFT_0412
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 388,747 + EX28DRAFT_0410 0.50 -2.8 388,755 - EX28DRAFT_0410 0.51 -1.2 388,855 - EX28DRAFT_0410 0.58 -0.6 388,858 - EX28DRAFT_0410 0.58 +0.9 388,858 - EX28DRAFT_0410 0.58 -0.1 388,985 - EX28DRAFT_0410 0.67 -0.1 389,013 + EX28DRAFT_0410 0.69 -0.8 389,266 + EX28DRAFT_0410 0.87 +0.2 389,266 + EX28DRAFT_0410 0.87 +0.3 389,266 + EX28DRAFT_0410 0.87 -0.3 389,267 - EX28DRAFT_0410 0.88 +0.4 389,386 + +0.5 389,440 + +0.4 389,441 - -0.7 389,494 - +0.4 389,549 - -1.3 389,550 + -0.0 389,551 - +0.1 389,566 - +0.3 389,585 - +0.3 389,672 + EX28DRAFT_0411 0.15 -2.3 389,700 + EX28DRAFT_0411 0.19 +0.4 389,700 + EX28DRAFT_0411 0.19 +0.3 389,701 - EX28DRAFT_0411 0.19 -2.7 389,759 - EX28DRAFT_0411 0.27 +0.1 389,781 + EX28DRAFT_0411 0.30 -4.0 389,804 - EX28DRAFT_0411 0.33 -1.3 390,030 + EX28DRAFT_0411 0.65 -2.9 390,030 + EX28DRAFT_0411 0.65 -1.5 390,030 + EX28DRAFT_0411 0.65 -1.1 390,051 + EX28DRAFT_0411 0.68 -2.7 390,052 - EX28DRAFT_0411 0.68 -1.0 390,088 - EX28DRAFT_0411 0.73 -0.3 390,114 + EX28DRAFT_0411 0.77 -1.7 390,115 - EX28DRAFT_0411 0.77 -3.6 390,180 + EX28DRAFT_0411 0.86 -1.7 390,181 - EX28DRAFT_0411 0.86 -1.1 390,237 - -1.9 390,237 - -0.9 390,318 + -1.2 390,419 + -0.0 390,675 + EX28DRAFT_0412 0.30 -0.9 390,814 - EX28DRAFT_0412 0.46 -0.2 390,814 - EX28DRAFT_0412 0.46 -0.3 390,887 - EX28DRAFT_0412 0.54 +0.8 390,887 - EX28DRAFT_0412 0.54 -0.4 390,915 + EX28DRAFT_0412 0.57 +0.3 390,916 - EX28DRAFT_0412 0.58 +0.1 390,916 - EX28DRAFT_0412 0.58 +0.7 391,024 + EX28DRAFT_0412 0.70 +0.0 391,038 + EX28DRAFT_0412 0.71 -0.2 391,038 + EX28DRAFT_0412 0.71 -0.0 391,038 + EX28DRAFT_0412 0.71 +0.6
Or see this region's nucleotide sequence