Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0394 and EX28DRAFT_0395 overlap by 1 nucleotides EX28DRAFT_0395 and EX28DRAFT_0396 are separated by 16 nucleotides
EX28DRAFT_0394: EX28DRAFT_0394 - Phosphotransferase System HPr (HPr) Family, at 368,134 to 369,264
_0394
EX28DRAFT_0395: EX28DRAFT_0395 - 1-phosphofructokinase, at 369,264 to 370,202
_0395
EX28DRAFT_0396: EX28DRAFT_0396 - PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIC component, at 370,219 to 371,904
_0396
Position (kb) 369
370
371 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 368.369 kb on - strand, within EX28DRAFT_0394 at 368.454 kb on - strand, within EX28DRAFT_0394 at 368.810 kb on + strand, within EX28DRAFT_0394 at 369.009 kb on - strand, within EX28DRAFT_0394 at 369.013 kb on - strand, within EX28DRAFT_0394 at 369.287 kb on + strand at 369.458 kb on + strand, within EX28DRAFT_0395 at 370.050 kb on + strand, within EX28DRAFT_0395 at 370.051 kb on - strand, within EX28DRAFT_0395 at 370.082 kb on + strand, within EX28DRAFT_0395 at 370.082 kb on + strand, within EX28DRAFT_0395 at 370.083 kb on - strand, within EX28DRAFT_0395 at 370.088 kb on - strand, within EX28DRAFT_0395 at 370.186 kb on + strand at 370.196 kb on + strand at 370.196 kb on + strand at 370.197 kb on - strand at 370.201 kb on - strand at 370.267 kb on + strand at 370.268 kb on - strand at 370.268 kb on - strand at 370.356 kb on - strand at 370.419 kb on + strand, within EX28DRAFT_0396 at 370.480 kb on + strand, within EX28DRAFT_0396 at 370.480 kb on + strand, within EX28DRAFT_0396 at 370.756 kb on + strand, within EX28DRAFT_0396 at 370.757 kb on - strand, within EX28DRAFT_0396 at 370.757 kb on - strand, within EX28DRAFT_0396 at 370.761 kb on + strand, within EX28DRAFT_0396 at 370.762 kb on - strand, within EX28DRAFT_0396 at 370.762 kb on - strand, within EX28DRAFT_0396 at 370.869 kb on + strand, within EX28DRAFT_0396 at 370.919 kb on - strand, within EX28DRAFT_0396 at 370.953 kb on + strand, within EX28DRAFT_0396 at 370.953 kb on + strand, within EX28DRAFT_0396 at 370.954 kb on - strand, within EX28DRAFT_0396 at 370.980 kb on + strand, within EX28DRAFT_0396 at 371.172 kb on + strand, within EX28DRAFT_0396
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 368,369 - EX28DRAFT_0394 0.21 -0.4 368,454 - EX28DRAFT_0394 0.28 -0.2 368,810 + EX28DRAFT_0394 0.60 -1.0 369,009 - EX28DRAFT_0394 0.77 -0.5 369,013 - EX28DRAFT_0394 0.78 -1.0 369,287 + +1.4 369,458 + EX28DRAFT_0395 0.21 +1.1 370,050 + EX28DRAFT_0395 0.84 -0.1 370,051 - EX28DRAFT_0395 0.84 +1.4 370,082 + EX28DRAFT_0395 0.87 +0.2 370,082 + EX28DRAFT_0395 0.87 +1.1 370,083 - EX28DRAFT_0395 0.87 +0.7 370,088 - EX28DRAFT_0395 0.88 +1.8 370,186 + +1.1 370,196 + -0.5 370,196 + +0.9 370,197 - +1.3 370,201 - +1.5 370,267 + -0.8 370,268 - -3.1 370,268 - -0.9 370,356 - -1.2 370,419 + EX28DRAFT_0396 0.12 -1.6 370,480 + EX28DRAFT_0396 0.15 -1.4 370,480 + EX28DRAFT_0396 0.15 -0.5 370,756 + EX28DRAFT_0396 0.32 -0.0 370,757 - EX28DRAFT_0396 0.32 -0.6 370,757 - EX28DRAFT_0396 0.32 -0.5 370,761 + EX28DRAFT_0396 0.32 +0.6 370,762 - EX28DRAFT_0396 0.32 -0.9 370,762 - EX28DRAFT_0396 0.32 -2.0 370,869 + EX28DRAFT_0396 0.39 +0.3 370,919 - EX28DRAFT_0396 0.42 +0.1 370,953 + EX28DRAFT_0396 0.44 -3.8 370,953 + EX28DRAFT_0396 0.44 -0.3 370,954 - EX28DRAFT_0396 0.44 -3.1 370,980 + EX28DRAFT_0396 0.45 -1.0 371,172 + EX28DRAFT_0396 0.57 -0.1
Or see this region's nucleotide sequence