Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0368 and EX28DRAFT_0369 are separated by 135 nucleotides EX28DRAFT_0369 and EX28DRAFT_0370 are separated by 209 nucleotides EX28DRAFT_0370 and EX28DRAFT_0371 are separated by 138 nucleotides
EX28DRAFT_0368: EX28DRAFT_0368 - malate:quinone-oxidoreductase, at 339,958 to 341,607
_0368
EX28DRAFT_0369: EX28DRAFT_0369 - Serine protease inhibitor ecotin, at 341,743 to 342,246
_0369
EX28DRAFT_0370: EX28DRAFT_0370 - Protein of unknown function (DUF2534), at 342,456 to 342,716
_0370
EX28DRAFT_0371: EX28DRAFT_0371 - Arabinose efflux permease, at 342,855 to 344,042
_0371
Position (kb) 342
343 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 341.518 kb on + strand at 341.518 kb on + strand at 341.519 kb on - strand at 341.749 kb on + strand at 341.750 kb on - strand at 341.819 kb on + strand, within EX28DRAFT_0369 at 341.820 kb on - strand, within EX28DRAFT_0369 at 341.820 kb on - strand, within EX28DRAFT_0369 at 341.820 kb on - strand, within EX28DRAFT_0369 at 341.846 kb on + strand, within EX28DRAFT_0369 at 341.874 kb on - strand, within EX28DRAFT_0369 at 341.958 kb on - strand, within EX28DRAFT_0369 at 342.063 kb on + strand, within EX28DRAFT_0369 at 342.258 kb on + strand at 342.259 kb on - strand at 342.316 kb on - strand at 342.421 kb on + strand at 342.421 kb on + strand at 342.421 kb on + strand at 342.422 kb on - strand at 342.423 kb on + strand at 342.425 kb on + strand at 342.425 kb on + strand at 342.426 kb on - strand at 342.426 kb on - strand at 342.426 kb on - strand at 342.426 kb on - strand at 342.431 kb on + strand at 342.432 kb on - strand at 342.518 kb on - strand, within EX28DRAFT_0370 at 342.521 kb on + strand, within EX28DRAFT_0370 at 342.521 kb on + strand, within EX28DRAFT_0370 at 342.576 kb on + strand, within EX28DRAFT_0370 at 342.576 kb on + strand, within EX28DRAFT_0370 at 342.577 kb on - strand, within EX28DRAFT_0370 at 342.577 kb on - strand, within EX28DRAFT_0370 at 342.581 kb on + strand, within EX28DRAFT_0370 at 342.581 kb on + strand, within EX28DRAFT_0370 at 342.581 kb on + strand, within EX28DRAFT_0370 at 342.612 kb on + strand, within EX28DRAFT_0370 at 342.612 kb on + strand, within EX28DRAFT_0370 at 342.612 kb on + strand, within EX28DRAFT_0370 at 342.612 kb on + strand, within EX28DRAFT_0370 at 342.613 kb on - strand, within EX28DRAFT_0370 at 342.613 kb on - strand, within EX28DRAFT_0370 at 342.613 kb on - strand, within EX28DRAFT_0370 at 342.613 kb on - strand, within EX28DRAFT_0370 at 342.613 kb on - strand, within EX28DRAFT_0370 at 342.643 kb on - strand, within EX28DRAFT_0370 at 342.715 kb on - strand at 342.731 kb on + strand at 342.735 kb on + strand at 342.736 kb on - strand at 342.736 kb on - strand at 342.809 kb on + strand at 342.920 kb on + strand at 342.921 kb on - strand at 342.933 kb on - strand at 342.947 kb on + strand at 342.947 kb on + strand at 342.971 kb on + strand at 343.047 kb on - strand, within EX28DRAFT_0371 at 343.050 kb on - strand, within EX28DRAFT_0371 at 343.092 kb on - strand, within EX28DRAFT_0371 at 343.113 kb on + strand, within EX28DRAFT_0371 at 343.325 kb on - strand, within EX28DRAFT_0371 at 343.334 kb on - strand, within EX28DRAFT_0371 at 343.339 kb on + strand, within EX28DRAFT_0371 at 343.419 kb on + strand, within EX28DRAFT_0371 at 343.419 kb on + strand, within EX28DRAFT_0371 at 343.463 kb on + strand, within EX28DRAFT_0371 at 343.464 kb on - strand, within EX28DRAFT_0371 at 343.464 kb on - strand, within EX28DRAFT_0371 at 343.467 kb on - strand, within EX28DRAFT_0371 at 343.467 kb on - strand, within EX28DRAFT_0371 at 343.611 kb on - strand, within EX28DRAFT_0371 at 343.644 kb on + strand, within EX28DRAFT_0371 at 343.645 kb on - strand, within EX28DRAFT_0371 at 343.645 kb on - strand, within EX28DRAFT_0371
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 341,518 + -1.0 341,518 + +0.4 341,519 - -3.4 341,749 + +0.6 341,750 - +0.4 341,819 + EX28DRAFT_0369 0.15 -0.6 341,820 - EX28DRAFT_0369 0.15 -0.4 341,820 - EX28DRAFT_0369 0.15 -0.7 341,820 - EX28DRAFT_0369 0.15 +0.4 341,846 + EX28DRAFT_0369 0.20 +0.9 341,874 - EX28DRAFT_0369 0.26 +0.0 341,958 - EX28DRAFT_0369 0.43 -0.1 342,063 + EX28DRAFT_0369 0.63 -0.2 342,258 + -0.1 342,259 - +0.2 342,316 - +0.4 342,421 + +0.9 342,421 + +1.8 342,421 + +0.2 342,422 - -2.0 342,423 + +0.7 342,425 + -0.5 342,425 + +0.4 342,426 - -0.1 342,426 - -0.1 342,426 - -1.0 342,426 - -0.3 342,431 + +1.3 342,432 - +0.6 342,518 - EX28DRAFT_0370 0.24 +0.6 342,521 + EX28DRAFT_0370 0.25 +0.5 342,521 + EX28DRAFT_0370 0.25 -0.1 342,576 + EX28DRAFT_0370 0.46 -0.5 342,576 + EX28DRAFT_0370 0.46 -0.3 342,577 - EX28DRAFT_0370 0.46 +1.3 342,577 - EX28DRAFT_0370 0.46 +1.8 342,581 + EX28DRAFT_0370 0.48 -0.5 342,581 + EX28DRAFT_0370 0.48 -0.2 342,581 + EX28DRAFT_0370 0.48 +1.0 342,612 + EX28DRAFT_0370 0.60 -0.0 342,612 + EX28DRAFT_0370 0.60 +0.1 342,612 + EX28DRAFT_0370 0.60 +0.6 342,612 + EX28DRAFT_0370 0.60 -0.4 342,613 - EX28DRAFT_0370 0.60 +1.1 342,613 - EX28DRAFT_0370 0.60 -3.7 342,613 - EX28DRAFT_0370 0.60 -0.5 342,613 - EX28DRAFT_0370 0.60 -0.1 342,613 - EX28DRAFT_0370 0.60 -1.5 342,643 - EX28DRAFT_0370 0.72 +1.1 342,715 - -3.3 342,731 + -1.1 342,735 + +0.8 342,736 - +0.9 342,736 - +0.1 342,809 + -0.5 342,920 + -0.5 342,921 - -0.1 342,933 - +0.8 342,947 + +0.6 342,947 + -0.2 342,971 + +0.2 343,047 - EX28DRAFT_0371 0.16 -0.2 343,050 - EX28DRAFT_0371 0.16 +0.5 343,092 - EX28DRAFT_0371 0.20 +0.9 343,113 + EX28DRAFT_0371 0.22 -0.4 343,325 - EX28DRAFT_0371 0.40 +0.9 343,334 - EX28DRAFT_0371 0.40 +0.2 343,339 + EX28DRAFT_0371 0.41 -2.4 343,419 + EX28DRAFT_0371 0.47 +1.5 343,419 + EX28DRAFT_0371 0.47 +0.4 343,463 + EX28DRAFT_0371 0.51 +0.1 343,464 - EX28DRAFT_0371 0.51 +0.0 343,464 - EX28DRAFT_0371 0.51 +0.2 343,467 - EX28DRAFT_0371 0.52 +0.2 343,467 - EX28DRAFT_0371 0.52 -2.0 343,611 - EX28DRAFT_0371 0.64 -0.5 343,644 + EX28DRAFT_0371 0.66 +0.1 343,645 - EX28DRAFT_0371 0.66 +1.8 343,645 - EX28DRAFT_0371 0.66 +0.5
Or see this region's nucleotide sequence