Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0365 and EX28DRAFT_0366 are separated by 148 nucleotides EX28DRAFT_0366 and EX28DRAFT_0367 overlap by 38 nucleotides
EX28DRAFT_0365: EX28DRAFT_0365 - cyclic peptide transporter, at 335,290 to 336,933
_0365
EX28DRAFT_0366: EX28DRAFT_0366 - Mg2+ transporter (mgtE), at 337,082 to 338,518
_0366
EX28DRAFT_0367: EX28DRAFT_0367 - Sulfate permease and related transporters (MFS superfamily), at 338,481 to 339,770
_0367
Position (kb) 337
338
339 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 336.177 kb on + strand, within EX28DRAFT_0365 at 336.177 kb on + strand, within EX28DRAFT_0365 at 336.178 kb on - strand, within EX28DRAFT_0365 at 336.178 kb on - strand, within EX28DRAFT_0365 at 336.210 kb on + strand, within EX28DRAFT_0365 at 336.378 kb on + strand, within EX28DRAFT_0365 at 336.406 kb on + strand, within EX28DRAFT_0365 at 336.407 kb on - strand, within EX28DRAFT_0365 at 336.824 kb on - strand at 336.824 kb on - strand at 336.830 kb on + strand at 336.830 kb on + strand at 336.830 kb on + strand at 336.831 kb on - strand at 336.831 kb on - strand at 336.971 kb on + strand at 336.971 kb on + strand at 336.972 kb on - strand at 336.972 kb on - strand at 336.972 kb on - strand at 337.026 kb on - strand at 337.026 kb on - strand at 337.026 kb on - strand at 337.029 kb on + strand at 337.029 kb on + strand at 337.029 kb on + strand at 337.029 kb on + strand at 337.029 kb on + strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.030 kb on - strand at 337.033 kb on + strand at 337.050 kb on + strand at 337.075 kb on - strand at 337.075 kb on - strand at 337.090 kb on - strand at 337.175 kb on - strand at 337.245 kb on + strand, within EX28DRAFT_0366 at 337.246 kb on - strand, within EX28DRAFT_0366 at 337.266 kb on + strand, within EX28DRAFT_0366 at 337.930 kb on - strand, within EX28DRAFT_0366 at 337.930 kb on - strand, within EX28DRAFT_0366 at 337.932 kb on - strand, within EX28DRAFT_0366 at 338.171 kb on - strand, within EX28DRAFT_0366 at 338.172 kb on + strand, within EX28DRAFT_0366 at 338.172 kb on + strand, within EX28DRAFT_0366 at 338.239 kb on + strand, within EX28DRAFT_0366 at 338.393 kb on - strand at 338.483 kb on - strand at 338.611 kb on - strand, within EX28DRAFT_0367 at 338.712 kb on - strand, within EX28DRAFT_0367 at 338.714 kb on + strand, within EX28DRAFT_0367 at 338.714 kb on + strand, within EX28DRAFT_0367 at 338.715 kb on - strand, within EX28DRAFT_0367 at 338.933 kb on + strand, within EX28DRAFT_0367 at 339.029 kb on + strand, within EX28DRAFT_0367 at 339.030 kb on - strand, within EX28DRAFT_0367 at 339.196 kb on + strand, within EX28DRAFT_0367 at 339.341 kb on + strand, within EX28DRAFT_0367 at 339.341 kb on + strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.422 kb on - strand, within EX28DRAFT_0367 at 339.426 kb on + strand, within EX28DRAFT_0367
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 336,177 + EX28DRAFT_0365 0.54 -0.0 336,177 + EX28DRAFT_0365 0.54 +0.7 336,178 - EX28DRAFT_0365 0.54 -1.8 336,178 - EX28DRAFT_0365 0.54 +0.5 336,210 + EX28DRAFT_0365 0.56 -0.1 336,378 + EX28DRAFT_0365 0.66 -0.6 336,406 + EX28DRAFT_0365 0.68 -1.5 336,407 - EX28DRAFT_0365 0.68 -0.0 336,824 - -0.2 336,824 - +1.7 336,830 + -0.1 336,830 + -0.5 336,830 + -1.0 336,831 - +0.7 336,831 - -1.2 336,971 + -1.1 336,971 + -0.6 336,972 - +0.8 336,972 - -0.5 336,972 - +0.1 337,026 - +0.5 337,026 - +0.6 337,026 - +0.7 337,029 + +0.5 337,029 + -1.4 337,029 + -0.8 337,029 + -1.0 337,029 + -0.0 337,030 - -1.2 337,030 - +0.1 337,030 - -0.9 337,030 - -0.0 337,030 - -0.4 337,030 - -0.5 337,030 - +0.3 337,033 + -0.4 337,050 + +0.1 337,075 - -0.7 337,075 - +0.0 337,090 - -0.6 337,175 - -0.3 337,245 + EX28DRAFT_0366 0.11 -0.3 337,246 - EX28DRAFT_0366 0.11 +1.8 337,266 + EX28DRAFT_0366 0.13 +0.5 337,930 - EX28DRAFT_0366 0.59 +0.6 337,930 - EX28DRAFT_0366 0.59 -0.2 337,932 - EX28DRAFT_0366 0.59 +0.1 338,171 - EX28DRAFT_0366 0.76 -0.4 338,172 + EX28DRAFT_0366 0.76 +1.5 338,172 + EX28DRAFT_0366 0.76 +1.5 338,239 + EX28DRAFT_0366 0.81 +0.7 338,393 - +0.5 338,483 - +1.9 338,611 - EX28DRAFT_0367 0.10 -0.0 338,712 - EX28DRAFT_0367 0.18 -0.9 338,714 + EX28DRAFT_0367 0.18 +0.0 338,714 + EX28DRAFT_0367 0.18 -0.7 338,715 - EX28DRAFT_0367 0.18 -0.4 338,933 + EX28DRAFT_0367 0.35 -2.8 339,029 + EX28DRAFT_0367 0.42 -0.5 339,030 - EX28DRAFT_0367 0.43 +0.7 339,196 + EX28DRAFT_0367 0.55 +0.2 339,341 + EX28DRAFT_0367 0.67 +0.6 339,341 + EX28DRAFT_0367 0.67 +0.7 339,422 - EX28DRAFT_0367 0.73 +0.6 339,422 - EX28DRAFT_0367 0.73 +0.9 339,422 - EX28DRAFT_0367 0.73 +0.9 339,422 - EX28DRAFT_0367 0.73 -0.1 339,426 + EX28DRAFT_0367 0.73 -0.9
Or see this region's nucleotide sequence