Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0361 and EX28DRAFT_0362 are separated by 114 nucleotides EX28DRAFT_0362 and EX28DRAFT_0363 are separated by 72 nucleotides
EX28DRAFT_0361: EX28DRAFT_0361 - Outer membrane protein (porin), at 331,148 to 332,263
_0361
EX28DRAFT_0362: EX28DRAFT_0362 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 332,378 to 333,433
_0362
EX28DRAFT_0363: EX28DRAFT_0363 - O-6-methylguanine DNA methyltransferase, at 333,506 to 334,564
_0363
Position (kb) 332
333
334 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 331.487 kb on - strand, within EX28DRAFT_0361 at 331.491 kb on - strand, within EX28DRAFT_0361 at 331.510 kb on - strand, within EX28DRAFT_0361 at 331.554 kb on - strand, within EX28DRAFT_0361 at 331.656 kb on - strand, within EX28DRAFT_0361 at 331.677 kb on + strand, within EX28DRAFT_0361 at 331.748 kb on + strand, within EX28DRAFT_0361 at 331.748 kb on + strand, within EX28DRAFT_0361 at 331.749 kb on - strand, within EX28DRAFT_0361 at 331.749 kb on - strand, within EX28DRAFT_0361 at 331.865 kb on + strand, within EX28DRAFT_0361 at 331.866 kb on - strand, within EX28DRAFT_0361 at 331.884 kb on - strand, within EX28DRAFT_0361 at 331.901 kb on + strand, within EX28DRAFT_0361 at 331.901 kb on + strand, within EX28DRAFT_0361 at 331.902 kb on - strand, within EX28DRAFT_0361 at 331.902 kb on - strand, within EX28DRAFT_0361 at 331.917 kb on - strand, within EX28DRAFT_0361 at 331.974 kb on - strand, within EX28DRAFT_0361 at 332.054 kb on + strand, within EX28DRAFT_0361 at 332.054 kb on + strand, within EX28DRAFT_0361 at 332.054 kb on + strand, within EX28DRAFT_0361 at 332.055 kb on - strand, within EX28DRAFT_0361 at 332.066 kb on - strand, within EX28DRAFT_0361 at 332.112 kb on - strand, within EX28DRAFT_0361 at 332.132 kb on + strand, within EX28DRAFT_0361 at 332.133 kb on - strand, within EX28DRAFT_0361 at 332.135 kb on + strand, within EX28DRAFT_0361 at 332.136 kb on - strand, within EX28DRAFT_0361 at 332.159 kb on + strand at 332.159 kb on + strand at 332.159 kb on + strand at 332.160 kb on - strand at 332.261 kb on + strand at 332.262 kb on - strand at 332.282 kb on + strand at 332.282 kb on + strand at 332.283 kb on - strand at 332.370 kb on - strand at 332.373 kb on - strand at 332.373 kb on - strand at 332.373 kb on - strand at 332.373 kb on - strand at 332.394 kb on + strand at 332.539 kb on + strand, within EX28DRAFT_0362 at 332.707 kb on + strand, within EX28DRAFT_0362 at 332.722 kb on + strand, within EX28DRAFT_0362 at 332.888 kb on + strand, within EX28DRAFT_0362 at 332.888 kb on + strand, within EX28DRAFT_0362 at 332.889 kb on - strand, within EX28DRAFT_0362 at 332.889 kb on - strand, within EX28DRAFT_0362 at 332.945 kb on + strand, within EX28DRAFT_0362 at 333.136 kb on + strand, within EX28DRAFT_0362 at 333.137 kb on - strand, within EX28DRAFT_0362 at 333.158 kb on + strand, within EX28DRAFT_0362 at 333.181 kb on + strand, within EX28DRAFT_0362 at 333.181 kb on + strand, within EX28DRAFT_0362 at 333.182 kb on - strand, within EX28DRAFT_0362 at 333.182 kb on - strand, within EX28DRAFT_0362 at 333.350 kb on + strand at 333.351 kb on - strand at 333.352 kb on + strand at 333.353 kb on - strand at 333.407 kb on - strand at 333.407 kb on - strand at 333.479 kb on + strand at 333.479 kb on + strand at 333.480 kb on - strand at 333.483 kb on + strand at 333.483 kb on + strand at 333.483 kb on + strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.484 kb on - strand at 333.489 kb on + strand at 333.489 kb on + strand at 333.489 kb on + strand at 333.490 kb on - strand at 333.490 kb on - strand at 333.524 kb on - strand at 333.524 kb on - strand at 333.865 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.998 kb on + strand, within EX28DRAFT_0363 at 333.999 kb on - strand, within EX28DRAFT_0363 at 333.999 kb on - strand, within EX28DRAFT_0363 at 334.071 kb on - strand, within EX28DRAFT_0363 at 334.079 kb on - strand, within EX28DRAFT_0363 at 334.203 kb on - strand, within EX28DRAFT_0363 at 334.273 kb on - strand, within EX28DRAFT_0363
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 331,487 - EX28DRAFT_0361 0.30 -0.6 331,491 - EX28DRAFT_0361 0.31 -1.8 331,510 - EX28DRAFT_0361 0.32 -0.1 331,554 - EX28DRAFT_0361 0.36 -0.4 331,656 - EX28DRAFT_0361 0.46 -1.2 331,677 + EX28DRAFT_0361 0.47 +0.5 331,748 + EX28DRAFT_0361 0.54 +0.9 331,748 + EX28DRAFT_0361 0.54 -0.4 331,749 - EX28DRAFT_0361 0.54 +0.0 331,749 - EX28DRAFT_0361 0.54 -0.6 331,865 + EX28DRAFT_0361 0.64 -3.2 331,866 - EX28DRAFT_0361 0.64 -0.9 331,884 - EX28DRAFT_0361 0.66 -1.2 331,901 + EX28DRAFT_0361 0.67 -0.2 331,901 + EX28DRAFT_0361 0.67 -0.4 331,902 - EX28DRAFT_0361 0.68 +0.3 331,902 - EX28DRAFT_0361 0.68 +0.2 331,917 - EX28DRAFT_0361 0.69 -1.4 331,974 - EX28DRAFT_0361 0.74 +0.2 332,054 + EX28DRAFT_0361 0.81 -0.2 332,054 + EX28DRAFT_0361 0.81 -0.7 332,054 + EX28DRAFT_0361 0.81 -0.5 332,055 - EX28DRAFT_0361 0.81 -0.5 332,066 - EX28DRAFT_0361 0.82 -4.4 332,112 - EX28DRAFT_0361 0.86 -0.5 332,132 + EX28DRAFT_0361 0.88 -0.2 332,133 - EX28DRAFT_0361 0.88 -1.4 332,135 + EX28DRAFT_0361 0.88 -0.0 332,136 - EX28DRAFT_0361 0.89 -0.6 332,159 + -3.2 332,159 + -0.1 332,159 + +0.1 332,160 - -0.3 332,261 + +0.1 332,262 - +0.7 332,282 + -0.8 332,282 + +0.2 332,283 - -1.0 332,370 - -1.1 332,373 - -1.0 332,373 - -0.3 332,373 - -0.7 332,373 - -0.1 332,394 + -0.8 332,539 + EX28DRAFT_0362 0.15 -2.8 332,707 + EX28DRAFT_0362 0.31 -1.9 332,722 + EX28DRAFT_0362 0.33 -1.3 332,888 + EX28DRAFT_0362 0.48 -2.3 332,888 + EX28DRAFT_0362 0.48 -2.1 332,889 - EX28DRAFT_0362 0.48 -1.3 332,889 - EX28DRAFT_0362 0.48 -2.4 332,945 + EX28DRAFT_0362 0.54 -3.3 333,136 + EX28DRAFT_0362 0.72 -2.6 333,137 - EX28DRAFT_0362 0.72 -1.1 333,158 + EX28DRAFT_0362 0.74 -1.4 333,181 + EX28DRAFT_0362 0.76 -1.7 333,181 + EX28DRAFT_0362 0.76 -1.6 333,182 - EX28DRAFT_0362 0.76 -0.5 333,182 - EX28DRAFT_0362 0.76 -1.9 333,350 + -0.4 333,351 - -2.2 333,352 + -1.5 333,353 - -2.8 333,407 - +0.0 333,407 - -0.1 333,479 + +0.1 333,479 + -0.1 333,480 - -0.1 333,483 + +2.1 333,483 + -1.9 333,483 + +0.3 333,484 - -1.2 333,484 - +0.9 333,484 - +0.5 333,484 - -0.5 333,484 - -0.1 333,484 - -1.1 333,484 - +0.6 333,489 + -0.4 333,489 + -0.7 333,489 + -0.1 333,490 - +0.2 333,490 - -3.7 333,524 - -1.9 333,524 - +0.3 333,865 + EX28DRAFT_0363 0.34 -0.0 333,998 + EX28DRAFT_0363 0.46 -0.5 333,998 + EX28DRAFT_0363 0.46 -0.6 333,998 + EX28DRAFT_0363 0.46 +0.3 333,999 - EX28DRAFT_0363 0.47 -0.0 333,999 - EX28DRAFT_0363 0.47 +0.6 334,071 - EX28DRAFT_0363 0.53 +0.2 334,079 - EX28DRAFT_0363 0.54 -0.6 334,203 - EX28DRAFT_0363 0.66 +1.3 334,273 - EX28DRAFT_0363 0.72 +0.5
Or see this region's nucleotide sequence