Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0332 and EX28DRAFT_0333 are separated by 76 nucleotides EX28DRAFT_0333 and EX28DRAFT_0334 are separated by 6 nucleotides
EX28DRAFT_0332: EX28DRAFT_0332 - proton-translocating NADH-quinone oxidoreductase, chain L, at 292,647 to 294,488
_0332
EX28DRAFT_0333: EX28DRAFT_0333 - proton-translocating NADH-quinone oxidoreductase, chain M, at 294,565 to 296,094
_0333
EX28DRAFT_0334: EX28DRAFT_0334 - proton-translocating NADH-quinone oxidoreductase, chain N, at 296,101 to 297,558
_0334
Position (kb) 294
295
296
297 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 293.670 kb on - strand, within EX28DRAFT_0332 at 293.773 kb on - strand, within EX28DRAFT_0332 at 293.931 kb on - strand, within EX28DRAFT_0332 at 293.931 kb on - strand, within EX28DRAFT_0332 at 293.953 kb on + strand, within EX28DRAFT_0332 at 294.195 kb on - strand, within EX28DRAFT_0332 at 294.426 kb on + strand at 294.587 kb on + strand at 294.587 kb on + strand at 294.925 kb on - strand, within EX28DRAFT_0333 at 295.065 kb on + strand, within EX28DRAFT_0333 at 295.093 kb on + strand, within EX28DRAFT_0333 at 295.094 kb on - strand, within EX28DRAFT_0333 at 295.551 kb on + strand, within EX28DRAFT_0333 at 295.552 kb on - strand, within EX28DRAFT_0333 at 295.556 kb on - strand, within EX28DRAFT_0333 at 295.681 kb on - strand, within EX28DRAFT_0333 at 295.867 kb on + strand, within EX28DRAFT_0333 at 295.868 kb on - strand, within EX28DRAFT_0333 at 296.079 kb on + strand at 296.092 kb on + strand at 296.108 kb on + strand at 296.576 kb on - strand, within EX28DRAFT_0334 at 296.576 kb on - strand, within EX28DRAFT_0334 at 296.632 kb on + strand, within EX28DRAFT_0334
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 293,670 - EX28DRAFT_0332 0.56 -1.6 293,773 - EX28DRAFT_0332 0.61 -0.8 293,931 - EX28DRAFT_0332 0.70 +1.5 293,931 - EX28DRAFT_0332 0.70 -1.4 293,953 + EX28DRAFT_0332 0.71 -1.8 294,195 - EX28DRAFT_0332 0.84 -1.2 294,426 + -2.3 294,587 + -0.8 294,587 + -1.2 294,925 - EX28DRAFT_0333 0.24 -2.4 295,065 + EX28DRAFT_0333 0.33 -1.4 295,093 + EX28DRAFT_0333 0.35 -4.0 295,094 - EX28DRAFT_0333 0.35 -2.7 295,551 + EX28DRAFT_0333 0.64 -2.2 295,552 - EX28DRAFT_0333 0.65 -1.7 295,556 - EX28DRAFT_0333 0.65 -0.6 295,681 - EX28DRAFT_0333 0.73 -3.3 295,867 + EX28DRAFT_0333 0.85 -2.8 295,868 - EX28DRAFT_0333 0.85 -2.1 296,079 + -1.3 296,092 + -1.5 296,108 + -1.3 296,576 - EX28DRAFT_0334 0.33 -2.5 296,576 - EX28DRAFT_0334 0.33 -0.8 296,632 + EX28DRAFT_0334 0.36 -1.0
Or see this region's nucleotide sequence