Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0253 and EX28DRAFT_0254 are separated by 29 nucleotides EX28DRAFT_0254 and EX28DRAFT_0255 are separated by 247 nucleotides EX28DRAFT_0255 and EX28DRAFT_0256 are separated by 139 nucleotides
EX28DRAFT_0253: EX28DRAFT_0253 - hypothetical protein, at 212,534 to 213,403
_0253
EX28DRAFT_0254: EX28DRAFT_0254 - hypothetical protein, at 213,433 to 213,651
_0254
EX28DRAFT_0255: EX28DRAFT_0255 - Domain of unknown function (DUF4123), at 213,899 to 214,714
_0255
EX28DRAFT_0256: EX28DRAFT_0256 - hypothetical protein, at 214,854 to 216,029
_0256
Position (kb) 213
214
215 Strain fitness (log2 ratio) -1
0
1 at 212.912 kb on + strand, within EX28DRAFT_0253 at 212.958 kb on + strand, within EX28DRAFT_0253 at 212.958 kb on + strand, within EX28DRAFT_0253 at 212.959 kb on - strand, within EX28DRAFT_0253 at 212.974 kb on + strand, within EX28DRAFT_0253 at 212.993 kb on - strand, within EX28DRAFT_0253 at 213.014 kb on - strand, within EX28DRAFT_0253 at 213.024 kb on + strand, within EX28DRAFT_0253 at 213.031 kb on + strand, within EX28DRAFT_0253 at 213.033 kb on + strand, within EX28DRAFT_0253 at 213.584 kb on + strand, within EX28DRAFT_0254 at 214.145 kb on - strand, within EX28DRAFT_0255 at 214.415 kb on - strand, within EX28DRAFT_0255 at 214.657 kb on + strand at 214.658 kb on - strand at 214.873 kb on + strand at 215.383 kb on + strand, within EX28DRAFT_0256 at 215.676 kb on - strand, within EX28DRAFT_0256
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 212,912 + EX28DRAFT_0253 0.43 -0.7 212,958 + EX28DRAFT_0253 0.49 +1.0 212,958 + EX28DRAFT_0253 0.49 +0.6 212,959 - EX28DRAFT_0253 0.49 -0.5 212,974 + EX28DRAFT_0253 0.51 -1.5 212,993 - EX28DRAFT_0253 0.53 -0.2 213,014 - EX28DRAFT_0253 0.55 +0.7 213,024 + EX28DRAFT_0253 0.56 -0.2 213,031 + EX28DRAFT_0253 0.57 +0.1 213,033 + EX28DRAFT_0253 0.57 -0.1 213,584 + EX28DRAFT_0254 0.69 +0.5 214,145 - EX28DRAFT_0255 0.30 +1.2 214,415 - EX28DRAFT_0255 0.63 -0.0 214,657 + +0.4 214,658 - -0.1 214,873 + -0.0 215,383 + EX28DRAFT_0256 0.45 +0.1 215,676 - EX28DRAFT_0256 0.70 +0.4
Or see this region's nucleotide sequence