Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0239 and EX28DRAFT_0240 are separated by 386 nucleotides EX28DRAFT_0240 and EX28DRAFT_0241 are separated by 482 nucleotides
EX28DRAFT_0239: EX28DRAFT_0239 - Putative regulator of cell autolysis, at 191,018 to 192,724
_0239
EX28DRAFT_0240: EX28DRAFT_0240 - Aspartate/tyrosine/aromatic aminotransferase, at 193,111 to 194,349
_0240
EX28DRAFT_0241: EX28DRAFT_0241 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase, at 194,832 to 195,749
_0241
Position (kb) 193
194
195 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 192.528 kb on - strand, within EX28DRAFT_0239 at 192.713 kb on + strand at 192.713 kb on + strand at 192.728 kb on + strand at 192.729 kb on - strand at 192.901 kb on - strand at 192.916 kb on - strand at 193.166 kb on - strand at 193.176 kb on + strand at 193.269 kb on + strand, within EX28DRAFT_0240 at 193.270 kb on - strand, within EX28DRAFT_0240 at 193.292 kb on + strand, within EX28DRAFT_0240 at 193.347 kb on - strand, within EX28DRAFT_0240 at 193.520 kb on - strand, within EX28DRAFT_0240 at 193.820 kb on + strand, within EX28DRAFT_0240 at 193.867 kb on - strand, within EX28DRAFT_0240 at 193.875 kb on + strand, within EX28DRAFT_0240 at 193.875 kb on + strand, within EX28DRAFT_0240 at 193.925 kb on - strand, within EX28DRAFT_0240 at 193.938 kb on + strand, within EX28DRAFT_0240 at 194.018 kb on - strand, within EX28DRAFT_0240 at 194.019 kb on + strand, within EX28DRAFT_0240 at 194.019 kb on + strand, within EX28DRAFT_0240 at 194.020 kb on - strand, within EX28DRAFT_0240 at 194.095 kb on + strand, within EX28DRAFT_0240 at 194.096 kb on - strand, within EX28DRAFT_0240 at 194.096 kb on - strand, within EX28DRAFT_0240 at 194.122 kb on + strand, within EX28DRAFT_0240 at 194.122 kb on + strand, within EX28DRAFT_0240 at 194.123 kb on - strand, within EX28DRAFT_0240 at 194.403 kb on + strand at 194.435 kb on + strand at 194.436 kb on - strand at 194.508 kb on + strand at 194.508 kb on + strand at 194.531 kb on + strand at 194.634 kb on + strand at 194.767 kb on + strand at 194.893 kb on + strand at 194.971 kb on + strand, within EX28DRAFT_0241 at 195.015 kb on - strand, within EX28DRAFT_0241 at 195.138 kb on - strand, within EX28DRAFT_0241 at 195.138 kb on - strand, within EX28DRAFT_0241 at 195.145 kb on + strand, within EX28DRAFT_0241 at 195.216 kb on - strand, within EX28DRAFT_0241 at 195.273 kb on - strand, within EX28DRAFT_0241 at 195.295 kb on + strand, within EX28DRAFT_0241 at 195.296 kb on - strand, within EX28DRAFT_0241 at 195.296 kb on - strand, within EX28DRAFT_0241
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 192,528 - EX28DRAFT_0239 0.88 +0.9 192,713 + +0.3 192,713 + -2.1 192,728 + +0.6 192,729 - -0.0 192,901 - +0.4 192,916 - +0.1 193,166 - -0.1 193,176 + +0.2 193,269 + EX28DRAFT_0240 0.13 +0.0 193,270 - EX28DRAFT_0240 0.13 -0.7 193,292 + EX28DRAFT_0240 0.15 +0.4 193,347 - EX28DRAFT_0240 0.19 -0.4 193,520 - EX28DRAFT_0240 0.33 -2.1 193,820 + EX28DRAFT_0240 0.57 -1.9 193,867 - EX28DRAFT_0240 0.61 +0.7 193,875 + EX28DRAFT_0240 0.62 +0.1 193,875 + EX28DRAFT_0240 0.62 -0.1 193,925 - EX28DRAFT_0240 0.66 -0.6 193,938 + EX28DRAFT_0240 0.67 +0.2 194,018 - EX28DRAFT_0240 0.73 -1.0 194,019 + EX28DRAFT_0240 0.73 +0.6 194,019 + EX28DRAFT_0240 0.73 +0.5 194,020 - EX28DRAFT_0240 0.73 -0.7 194,095 + EX28DRAFT_0240 0.79 +1.6 194,096 - EX28DRAFT_0240 0.79 +0.5 194,096 - EX28DRAFT_0240 0.79 +0.3 194,122 + EX28DRAFT_0240 0.82 -1.0 194,122 + EX28DRAFT_0240 0.82 +0.5 194,123 - EX28DRAFT_0240 0.82 +0.2 194,403 + -3.4 194,435 + +0.6 194,436 - -0.6 194,508 + +1.7 194,508 + +0.3 194,531 + -0.2 194,634 + +0.2 194,767 + +0.8 194,893 + +0.6 194,971 + EX28DRAFT_0241 0.15 +0.5 195,015 - EX28DRAFT_0241 0.20 -0.3 195,138 - EX28DRAFT_0241 0.33 -0.3 195,138 - EX28DRAFT_0241 0.33 +0.6 195,145 + EX28DRAFT_0241 0.34 -0.8 195,216 - EX28DRAFT_0241 0.42 +0.4 195,273 - EX28DRAFT_0241 0.48 -0.7 195,295 + EX28DRAFT_0241 0.50 -0.2 195,296 - EX28DRAFT_0241 0.51 +0.8 195,296 - EX28DRAFT_0241 0.51 +1.4
Or see this region's nucleotide sequence