Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0206 and EX28DRAFT_0207 overlap by 1 nucleotides EX28DRAFT_0207 and EX28DRAFT_0208 overlap by 11 nucleotides EX28DRAFT_0208 and EX28DRAFT_0209 are separated by 118 nucleotides
EX28DRAFT_0206: EX28DRAFT_0206 - sulfate ABC transporter, permease protein CysT, at 160,559 to 161,392
_0206
EX28DRAFT_0207: EX28DRAFT_0207 - sulfate ABC transporter, permease protein CysW, at 161,392 to 162,267
_0207
EX28DRAFT_0208: EX28DRAFT_0208 - sulfate ABC transporter, ATP-binding protein, at 162,257 to 163,351
_0208
EX28DRAFT_0209: EX28DRAFT_0209 - cysteine synthase B, at 163,470 to 164,381
_0209
Position (kb) 162
163
164 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 161.382 kb on + strand at 161.382 kb on + strand at 161.383 kb on - strand at 161.383 kb on - strand at 161.404 kb on - strand at 161.509 kb on + strand, within EX28DRAFT_0207 at 161.509 kb on + strand, within EX28DRAFT_0207 at 161.510 kb on - strand, within EX28DRAFT_0207 at 161.510 kb on - strand, within EX28DRAFT_0207 at 161.511 kb on + strand, within EX28DRAFT_0207 at 161.512 kb on - strand, within EX28DRAFT_0207 at 161.753 kb on - strand, within EX28DRAFT_0207 at 161.764 kb on + strand, within EX28DRAFT_0207 at 161.765 kb on - strand, within EX28DRAFT_0207 at 161.765 kb on - strand, within EX28DRAFT_0207 at 161.805 kb on + strand, within EX28DRAFT_0207 at 162.004 kb on + strand, within EX28DRAFT_0207 at 162.128 kb on - strand, within EX28DRAFT_0207 at 162.278 kb on - strand at 162.280 kb on + strand at 162.280 kb on + strand at 162.281 kb on - strand at 162.316 kb on + strand at 162.478 kb on + strand, within EX28DRAFT_0208 at 162.493 kb on - strand, within EX28DRAFT_0208 at 162.503 kb on + strand, within EX28DRAFT_0208 at 162.992 kb on - strand, within EX28DRAFT_0208 at 163.169 kb on + strand, within EX28DRAFT_0208 at 163.169 kb on + strand, within EX28DRAFT_0208 at 163.186 kb on - strand, within EX28DRAFT_0208 at 163.292 kb on + strand at 163.352 kb on + strand at 163.357 kb on + strand at 163.358 kb on - strand at 163.360 kb on + strand at 163.360 kb on + strand at 163.361 kb on - strand at 163.361 kb on - strand at 163.406 kb on + strand at 163.455 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 161,382 + -5.5 161,382 + -2.7 161,383 - -3.0 161,383 - -4.0 161,404 - -3.2 161,509 + EX28DRAFT_0207 0.13 -0.2 161,509 + EX28DRAFT_0207 0.13 -2.9 161,510 - EX28DRAFT_0207 0.13 -2.1 161,510 - EX28DRAFT_0207 0.13 -3.2 161,511 + EX28DRAFT_0207 0.14 -4.0 161,512 - EX28DRAFT_0207 0.14 -0.7 161,753 - EX28DRAFT_0207 0.41 -3.4 161,764 + EX28DRAFT_0207 0.42 -3.0 161,765 - EX28DRAFT_0207 0.43 -4.0 161,765 - EX28DRAFT_0207 0.43 -1.0 161,805 + EX28DRAFT_0207 0.47 -2.5 162,004 + EX28DRAFT_0207 0.70 -1.5 162,128 - EX28DRAFT_0207 0.84 -2.2 162,278 - -2.3 162,280 + -3.4 162,280 + -2.7 162,281 - -3.9 162,316 + -4.1 162,478 + EX28DRAFT_0208 0.20 -2.0 162,493 - EX28DRAFT_0208 0.22 -0.1 162,503 + EX28DRAFT_0208 0.22 -2.4 162,992 - EX28DRAFT_0208 0.67 +0.4 163,169 + EX28DRAFT_0208 0.83 -4.1 163,169 + EX28DRAFT_0208 0.83 -4.6 163,186 - EX28DRAFT_0208 0.85 -2.0 163,292 + -2.3 163,352 + -1.2 163,357 + +0.1 163,358 - +0.0 163,360 + -0.2 163,360 + +0.3 163,361 - +0.7 163,361 - +1.1 163,406 + +0.4 163,455 + -0.4
Or see this region's nucleotide sequence