Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0205 and EX28DRAFT_0206 overlap by 1 nucleotides EX28DRAFT_0206 and EX28DRAFT_0207 overlap by 1 nucleotides EX28DRAFT_0207 and EX28DRAFT_0208 overlap by 11 nucleotides
EX28DRAFT_0205: EX28DRAFT_0205 - sulfate/thiosulfate-binding protein, at 159,546 to 160,559
_0205
EX28DRAFT_0206: EX28DRAFT_0206 - sulfate ABC transporter, permease protein CysT, at 160,559 to 161,392
_0206
EX28DRAFT_0207: EX28DRAFT_0207 - sulfate ABC transporter, permease protein CysW, at 161,392 to 162,267
_0207
EX28DRAFT_0208: EX28DRAFT_0208 - sulfate ABC transporter, ATP-binding protein, at 162,257 to 163,351
_0208
Position (kb) 161
162
163 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 160.393 kb on - strand, within EX28DRAFT_0205 at 160.393 kb on - strand, within EX28DRAFT_0205 at 160.417 kb on + strand, within EX28DRAFT_0205 at 160.418 kb on - strand, within EX28DRAFT_0205 at 160.418 kb on - strand, within EX28DRAFT_0205 at 160.436 kb on + strand, within EX28DRAFT_0205 at 160.437 kb on - strand, within EX28DRAFT_0205 at 160.528 kb on + strand at 160.553 kb on + strand at 160.553 kb on + strand at 160.553 kb on + strand at 160.554 kb on - strand at 160.557 kb on + strand at 160.557 kb on + strand at 160.558 kb on - strand at 160.558 kb on - strand at 160.603 kb on - strand at 160.738 kb on + strand, within EX28DRAFT_0206 at 160.738 kb on + strand, within EX28DRAFT_0206 at 160.739 kb on - strand, within EX28DRAFT_0206 at 160.970 kb on + strand, within EX28DRAFT_0206 at 160.970 kb on + strand, within EX28DRAFT_0206 at 160.970 kb on + strand, within EX28DRAFT_0206 at 160.971 kb on - strand, within EX28DRAFT_0206 at 161.382 kb on + strand at 161.382 kb on + strand at 161.383 kb on - strand at 161.383 kb on - strand at 161.404 kb on - strand at 161.509 kb on + strand, within EX28DRAFT_0207 at 161.509 kb on + strand, within EX28DRAFT_0207 at 161.510 kb on - strand, within EX28DRAFT_0207 at 161.510 kb on - strand, within EX28DRAFT_0207 at 161.511 kb on + strand, within EX28DRAFT_0207 at 161.512 kb on - strand, within EX28DRAFT_0207 at 161.753 kb on - strand, within EX28DRAFT_0207 at 161.764 kb on + strand, within EX28DRAFT_0207 at 161.765 kb on - strand, within EX28DRAFT_0207 at 161.765 kb on - strand, within EX28DRAFT_0207 at 161.805 kb on + strand, within EX28DRAFT_0207 at 162.004 kb on + strand, within EX28DRAFT_0207 at 162.128 kb on - strand, within EX28DRAFT_0207 at 162.278 kb on - strand at 162.280 kb on + strand at 162.280 kb on + strand at 162.281 kb on - strand at 162.316 kb on + strand at 162.478 kb on + strand, within EX28DRAFT_0208 at 162.493 kb on - strand, within EX28DRAFT_0208 at 162.503 kb on + strand, within EX28DRAFT_0208 at 162.992 kb on - strand, within EX28DRAFT_0208 at 163.169 kb on + strand, within EX28DRAFT_0208 at 163.169 kb on + strand, within EX28DRAFT_0208 at 163.186 kb on - strand, within EX28DRAFT_0208
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 160,393 - EX28DRAFT_0205 0.84 -2.1 160,393 - EX28DRAFT_0205 0.84 -3.2 160,417 + EX28DRAFT_0205 0.86 -4.8 160,418 - EX28DRAFT_0205 0.86 -1.3 160,418 - EX28DRAFT_0205 0.86 -1.3 160,436 + EX28DRAFT_0205 0.88 -2.7 160,437 - EX28DRAFT_0205 0.88 -2.3 160,528 + -2.6 160,553 + -0.3 160,553 + -0.4 160,553 + -1.1 160,554 - -2.1 160,557 + -4.7 160,557 + -2.6 160,558 - -2.5 160,558 - +2.2 160,603 - -2.3 160,738 + EX28DRAFT_0206 0.21 -3.7 160,738 + EX28DRAFT_0206 0.21 -4.2 160,739 - EX28DRAFT_0206 0.22 -0.5 160,970 + EX28DRAFT_0206 0.49 -1.7 160,970 + EX28DRAFT_0206 0.49 -2.8 160,970 + EX28DRAFT_0206 0.49 -3.1 160,971 - EX28DRAFT_0206 0.49 -1.9 161,382 + -5.5 161,382 + -2.7 161,383 - -3.0 161,383 - -4.0 161,404 - -3.2 161,509 + EX28DRAFT_0207 0.13 -0.2 161,509 + EX28DRAFT_0207 0.13 -2.9 161,510 - EX28DRAFT_0207 0.13 -2.1 161,510 - EX28DRAFT_0207 0.13 -3.2 161,511 + EX28DRAFT_0207 0.14 -4.0 161,512 - EX28DRAFT_0207 0.14 -0.7 161,753 - EX28DRAFT_0207 0.41 -3.4 161,764 + EX28DRAFT_0207 0.42 -3.0 161,765 - EX28DRAFT_0207 0.43 -4.0 161,765 - EX28DRAFT_0207 0.43 -1.0 161,805 + EX28DRAFT_0207 0.47 -2.5 162,004 + EX28DRAFT_0207 0.70 -1.5 162,128 - EX28DRAFT_0207 0.84 -2.2 162,278 - -2.3 162,280 + -3.4 162,280 + -2.7 162,281 - -3.9 162,316 + -4.1 162,478 + EX28DRAFT_0208 0.20 -2.0 162,493 - EX28DRAFT_0208 0.22 -0.1 162,503 + EX28DRAFT_0208 0.22 -2.4 162,992 - EX28DRAFT_0208 0.67 +0.4 163,169 + EX28DRAFT_0208 0.83 -4.1 163,169 + EX28DRAFT_0208 0.83 -4.6 163,186 - EX28DRAFT_0208 0.85 -2.0
Or see this region's nucleotide sequence