Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0162 and EX28DRAFT_0163 overlap by 4 nucleotides EX28DRAFT_0163 and EX28DRAFT_0164 are separated by 370 nucleotides EX28DRAFT_0164 and EX28DRAFT_0165 are separated by 4 nucleotides
EX28DRAFT_0162: EX28DRAFT_0162 - Transcriptional regulator, at 108,574 to 109,464
_0162
EX28DRAFT_0163: EX28DRAFT_0163 - Protein of unknown function (DUF2633), at 109,461 to 109,631
_0163
EX28DRAFT_0164: EX28DRAFT_0164 - FOG: EAL domain, at 110,002 to 112,242
_0164
EX28DRAFT_0165: EX28DRAFT_0165 - exopolyphosphatase, at 112,247 to 113,785
_0165
Position (kb)
110
111
112
113 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 109.084 kb on - strand, within EX28DRAFT_0162 at 109.293 kb on + strand, within EX28DRAFT_0162 at 109.293 kb on + strand, within EX28DRAFT_0162 at 109.293 kb on + strand, within EX28DRAFT_0162 at 109.294 kb on - strand, within EX28DRAFT_0162 at 109.388 kb on + strand at 109.588 kb on - strand, within EX28DRAFT_0163 at 109.689 kb on - strand at 109.731 kb on - strand at 109.731 kb on - strand at 109.785 kb on + strand at 109.800 kb on - strand at 109.837 kb on + strand at 109.889 kb on + strand at 109.906 kb on - strand at 110.001 kb on + strand at 110.001 kb on + strand at 110.001 kb on + strand at 110.058 kb on + strand at 110.076 kb on - strand at 110.100 kb on + strand at 110.101 kb on - strand at 110.137 kb on + strand at 110.137 kb on + strand at 110.138 kb on - strand at 110.140 kb on + strand at 110.140 kb on + strand at 110.141 kb on - strand at 110.141 kb on - strand at 110.144 kb on + strand at 110.208 kb on - strand at 110.220 kb on + strand at 110.227 kb on + strand, within EX28DRAFT_0164 at 110.434 kb on + strand, within EX28DRAFT_0164 at 110.446 kb on + strand, within EX28DRAFT_0164 at 110.446 kb on + strand, within EX28DRAFT_0164 at 110.446 kb on + strand, within EX28DRAFT_0164 at 110.475 kb on - strand, within EX28DRAFT_0164 at 110.475 kb on - strand, within EX28DRAFT_0164 at 110.506 kb on + strand, within EX28DRAFT_0164 at 110.551 kb on + strand, within EX28DRAFT_0164 at 110.551 kb on + strand, within EX28DRAFT_0164 at 110.552 kb on - strand, within EX28DRAFT_0164 at 110.735 kb on - strand, within EX28DRAFT_0164 at 110.805 kb on + strand, within EX28DRAFT_0164 at 110.832 kb on + strand, within EX28DRAFT_0164 at 110.872 kb on + strand, within EX28DRAFT_0164 at 110.873 kb on - strand, within EX28DRAFT_0164 at 110.932 kb on + strand, within EX28DRAFT_0164 at 110.932 kb on + strand, within EX28DRAFT_0164 at 110.933 kb on - strand, within EX28DRAFT_0164 at 110.934 kb on + strand, within EX28DRAFT_0164 at 110.935 kb on - strand, within EX28DRAFT_0164 at 110.935 kb on - strand, within EX28DRAFT_0164 at 111.194 kb on - strand, within EX28DRAFT_0164 at 111.228 kb on + strand, within EX28DRAFT_0164 at 111.334 kb on + strand, within EX28DRAFT_0164 at 111.335 kb on - strand, within EX28DRAFT_0164 at 111.335 kb on - strand, within EX28DRAFT_0164 at 111.335 kb on - strand, within EX28DRAFT_0164 at 111.335 kb on - strand, within EX28DRAFT_0164 at 111.340 kb on + strand, within EX28DRAFT_0164 at 111.340 kb on + strand, within EX28DRAFT_0164 at 111.341 kb on - strand, within EX28DRAFT_0164 at 111.341 kb on - strand, within EX28DRAFT_0164 at 111.367 kb on + strand, within EX28DRAFT_0164 at 111.602 kb on + strand, within EX28DRAFT_0164 at 111.817 kb on + strand, within EX28DRAFT_0164 at 111.818 kb on - strand, within EX28DRAFT_0164 at 111.891 kb on - strand, within EX28DRAFT_0164 at 111.927 kb on + strand, within EX28DRAFT_0164 at 111.928 kb on - strand, within EX28DRAFT_0164 at 111.928 kb on - strand, within EX28DRAFT_0164 at 111.964 kb on + strand, within EX28DRAFT_0164 at 111.964 kb on + strand, within EX28DRAFT_0164 at 111.965 kb on - strand, within EX28DRAFT_0164 at 112.112 kb on - strand at 112.130 kb on + strand at 112.130 kb on + strand at 112.131 kb on - strand at 112.131 kb on - strand at 112.135 kb on - strand at 112.162 kb on + strand at 112.162 kb on + strand at 112.163 kb on - strand at 112.627 kb on - strand, within EX28DRAFT_0165 at 112.755 kb on + strand, within EX28DRAFT_0165 at 112.756 kb on - strand, within EX28DRAFT_0165 at 112.809 kb on + strand, within EX28DRAFT_0165 at 112.926 kb on - strand, within EX28DRAFT_0165 at 113.030 kb on - strand, within EX28DRAFT_0165
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 109,084 - EX28DRAFT_0162 0.57 -2.0 109,293 + EX28DRAFT_0162 0.81 -0.4 109,293 + EX28DRAFT_0162 0.81 -0.9 109,293 + EX28DRAFT_0162 0.81 +0.3 109,294 - EX28DRAFT_0162 0.81 +1.9 109,388 + -0.0 109,588 - EX28DRAFT_0163 0.74 -1.6 109,689 - -0.2 109,731 - -0.4 109,731 - +0.1 109,785 + -0.4 109,800 - +0.1 109,837 + +0.1 109,889 + -0.2 109,906 - -0.0 110,001 + -0.2 110,001 + +0.0 110,001 + -0.2 110,058 + -3.2 110,076 - -0.5 110,100 + -0.4 110,101 - +1.1 110,137 + -0.3 110,137 + -0.5 110,138 - -0.1 110,140 + +0.1 110,140 + -1.4 110,141 - +0.2 110,141 - +0.2 110,144 + +0.9 110,208 - +0.1 110,220 + -0.5 110,227 + EX28DRAFT_0164 0.10 +0.4 110,434 + EX28DRAFT_0164 0.19 -0.3 110,446 + EX28DRAFT_0164 0.20 -0.6 110,446 + EX28DRAFT_0164 0.20 +0.4 110,446 + EX28DRAFT_0164 0.20 +0.0 110,475 - EX28DRAFT_0164 0.21 -0.3 110,475 - EX28DRAFT_0164 0.21 +0.5 110,506 + EX28DRAFT_0164 0.22 -1.7 110,551 + EX28DRAFT_0164 0.24 -0.1 110,551 + EX28DRAFT_0164 0.24 -0.5 110,552 - EX28DRAFT_0164 0.25 -1.3 110,735 - EX28DRAFT_0164 0.33 +1.4 110,805 + EX28DRAFT_0164 0.36 -1.3 110,832 + EX28DRAFT_0164 0.37 -0.0 110,872 + EX28DRAFT_0164 0.39 +0.7 110,873 - EX28DRAFT_0164 0.39 -0.2 110,932 + EX28DRAFT_0164 0.41 -0.4 110,932 + EX28DRAFT_0164 0.41 +0.5 110,933 - EX28DRAFT_0164 0.42 +0.1 110,934 + EX28DRAFT_0164 0.42 +0.2 110,935 - EX28DRAFT_0164 0.42 +0.5 110,935 - EX28DRAFT_0164 0.42 +0.1 111,194 - EX28DRAFT_0164 0.53 -0.0 111,228 + EX28DRAFT_0164 0.55 -1.1 111,334 + EX28DRAFT_0164 0.59 +0.4 111,335 - EX28DRAFT_0164 0.59 +1.0 111,335 - EX28DRAFT_0164 0.59 -0.1 111,335 - EX28DRAFT_0164 0.59 +0.9 111,335 - EX28DRAFT_0164 0.59 -0.0 111,340 + EX28DRAFT_0164 0.60 +0.4 111,340 + EX28DRAFT_0164 0.60 +0.1 111,341 - EX28DRAFT_0164 0.60 +0.1 111,341 - EX28DRAFT_0164 0.60 +1.0 111,367 + EX28DRAFT_0164 0.61 -0.1 111,602 + EX28DRAFT_0164 0.71 +0.2 111,817 + EX28DRAFT_0164 0.81 +0.1 111,818 - EX28DRAFT_0164 0.81 +0.1 111,891 - EX28DRAFT_0164 0.84 +0.3 111,927 + EX28DRAFT_0164 0.86 -2.3 111,928 - EX28DRAFT_0164 0.86 +0.0 111,928 - EX28DRAFT_0164 0.86 +1.3 111,964 + EX28DRAFT_0164 0.88 +0.5 111,964 + EX28DRAFT_0164 0.88 +0.7 111,965 - EX28DRAFT_0164 0.88 +0.8 112,112 - -0.1 112,130 + +0.6 112,130 + +0.0 112,131 - +0.7 112,131 - +0.9 112,135 - +0.3 112,162 + -0.1 112,162 + +0.6 112,163 - +0.4 112,627 - EX28DRAFT_0165 0.25 -1.4 112,755 + EX28DRAFT_0165 0.33 -2.0 112,756 - EX28DRAFT_0165 0.33 +0.2 112,809 + EX28DRAFT_0165 0.37 -1.0 112,926 - EX28DRAFT_0165 0.44 -0.2 113,030 - EX28DRAFT_0165 0.51 -0.2
Or see this region's nucleotide sequence