Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0158 and EX28DRAFT_0159 are separated by 10 nucleotides EX28DRAFT_0159 and EX28DRAFT_0160 are separated by 11 nucleotides EX28DRAFT_0160 and EX28DRAFT_0161 are separated by 50 nucleotides
EX28DRAFT_0158: EX28DRAFT_0158 - transcriptional regulator, HxlR family, at 105,520 to 105,963
_0158
EX28DRAFT_0159: EX28DRAFT_0159 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 105,974 to 106,717
_0159
EX28DRAFT_0160: EX28DRAFT_0160 - hypothetical protein, at 106,729 to 107,196
_0160
EX28DRAFT_0161: EX28DRAFT_0161 - Cyanate permease, at 107,247 to 108,476
_0161
Position (kb) 106
107
108 Strain fitness (log2 ratio) -1
0
1
2 at 105.757 kb on + strand, within EX28DRAFT_0158 at 105.758 kb on - strand, within EX28DRAFT_0158 at 105.758 kb on - strand, within EX28DRAFT_0158 at 105.758 kb on - strand, within EX28DRAFT_0158 at 105.979 kb on + strand at 105.979 kb on + strand at 105.979 kb on + strand at 105.980 kb on - strand at 106.137 kb on + strand, within EX28DRAFT_0159 at 106.289 kb on + strand, within EX28DRAFT_0159 at 106.289 kb on + strand, within EX28DRAFT_0159 at 106.289 kb on + strand, within EX28DRAFT_0159 at 106.289 kb on + strand, within EX28DRAFT_0159 at 106.290 kb on - strand, within EX28DRAFT_0159 at 106.290 kb on - strand, within EX28DRAFT_0159 at 106.310 kb on - strand, within EX28DRAFT_0159 at 106.442 kb on + strand, within EX28DRAFT_0159 at 106.597 kb on + strand, within EX28DRAFT_0159 at 106.651 kb on + strand at 106.701 kb on - strand at 106.816 kb on - strand, within EX28DRAFT_0160 at 106.816 kb on - strand, within EX28DRAFT_0160 at 107.248 kb on + strand at 107.261 kb on + strand at 107.322 kb on + strand at 107.322 kb on + strand at 107.426 kb on + strand, within EX28DRAFT_0161 at 107.506 kb on + strand, within EX28DRAFT_0161 at 107.507 kb on - strand, within EX28DRAFT_0161 at 107.609 kb on + strand, within EX28DRAFT_0161 at 107.609 kb on + strand, within EX28DRAFT_0161 at 107.609 kb on + strand, within EX28DRAFT_0161 at 107.609 kb on + strand, within EX28DRAFT_0161 at 107.783 kb on + strand, within EX28DRAFT_0161 at 108.102 kb on + strand, within EX28DRAFT_0161 at 108.103 kb on - strand, within EX28DRAFT_0161 at 108.173 kb on - strand, within EX28DRAFT_0161
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 105,757 + EX28DRAFT_0158 0.53 -0.6 105,758 - EX28DRAFT_0158 0.54 +0.8 105,758 - EX28DRAFT_0158 0.54 -0.3 105,758 - EX28DRAFT_0158 0.54 -0.1 105,979 + -1.4 105,979 + -0.1 105,979 + +0.1 105,980 - -0.9 106,137 + EX28DRAFT_0159 0.22 -0.2 106,289 + EX28DRAFT_0159 0.42 +0.8 106,289 + EX28DRAFT_0159 0.42 +0.4 106,289 + EX28DRAFT_0159 0.42 -0.3 106,289 + EX28DRAFT_0159 0.42 -0.7 106,290 - EX28DRAFT_0159 0.42 +0.5 106,290 - EX28DRAFT_0159 0.42 -0.1 106,310 - EX28DRAFT_0159 0.45 +0.2 106,442 + EX28DRAFT_0159 0.63 +0.2 106,597 + EX28DRAFT_0159 0.84 +0.5 106,651 + +0.1 106,701 - +0.1 106,816 - EX28DRAFT_0160 0.19 +0.8 106,816 - EX28DRAFT_0160 0.19 +1.8 107,248 + -0.5 107,261 + -0.5 107,322 + -0.4 107,322 + +1.4 107,426 + EX28DRAFT_0161 0.15 -0.2 107,506 + EX28DRAFT_0161 0.21 -0.3 107,507 - EX28DRAFT_0161 0.21 -0.4 107,609 + EX28DRAFT_0161 0.29 -0.4 107,609 + EX28DRAFT_0161 0.29 +0.7 107,609 + EX28DRAFT_0161 0.29 +2.2 107,609 + EX28DRAFT_0161 0.29 -0.5 107,783 + EX28DRAFT_0161 0.44 -0.5 108,102 + EX28DRAFT_0161 0.70 +0.1 108,103 - EX28DRAFT_0161 0.70 +0.6 108,173 - EX28DRAFT_0161 0.75 +0.5
Or see this region's nucleotide sequence