Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0069 and EX28DRAFT_0070 are separated by 11 nucleotides EX28DRAFT_0070 and EX28DRAFT_0071 overlap by 16 nucleotides EX28DRAFT_0071 and EX28DRAFT_0072 are separated by 422 nucleotides
EX28DRAFT_0069: EX28DRAFT_0069 - Superfamily II DNA and RNA helicases, at 10,347 to 11,675
_0069
EX28DRAFT_0070: EX28DRAFT_0070 - Predicted O-methyltransferase, at 11,687 to 12,545
_0070
EX28DRAFT_0071: EX28DRAFT_0071 - L-aspartate oxidase (EC 1.4.3.16), at 12,530 to 14,149
_0071
EX28DRAFT_0072: EX28DRAFT_0072 - RNA polymerase sigma factor RpoE, at 14,572 to 15,147
_0072
Position (kb) 12
13
14
15 Strain fitness (log2 ratio) -2
-1
0
1 at 11.681 kb on - strand at 11.681 kb on - strand at 11.702 kb on + strand at 11.703 kb on - strand at 11.704 kb on + strand at 11.704 kb on + strand at 11.704 kb on + strand at 11.705 kb on - strand at 11.720 kb on - strand at 11.736 kb on + strand at 11.737 kb on - strand at 11.737 kb on - strand at 11.771 kb on + strand at 11.771 kb on + strand at 11.792 kb on - strand, within EX28DRAFT_0070 at 11.792 kb on - strand, within EX28DRAFT_0070 at 11.948 kb on + strand, within EX28DRAFT_0070 at 11.948 kb on + strand, within EX28DRAFT_0070 at 11.949 kb on - strand, within EX28DRAFT_0070 at 12.072 kb on - strand, within EX28DRAFT_0070 at 12.231 kb on + strand, within EX28DRAFT_0070 at 12.231 kb on + strand, within EX28DRAFT_0070 at 12.232 kb on - strand, within EX28DRAFT_0070 at 12.233 kb on + strand, within EX28DRAFT_0070 at 12.252 kb on - strand, within EX28DRAFT_0070 at 12.386 kb on + strand, within EX28DRAFT_0070 at 12.386 kb on + strand, within EX28DRAFT_0070 at 12.507 kb on + strand at 12.539 kb on + strand at 12.539 kb on + strand at 12.543 kb on + strand at 12.543 kb on + strand at 12.544 kb on - strand at 12.604 kb on + strand at 12.606 kb on + strand at 12.606 kb on + strand at 12.606 kb on + strand at 12.606 kb on + strand at 12.628 kb on + strand at 12.718 kb on - strand, within EX28DRAFT_0071 at 12.720 kb on + strand, within EX28DRAFT_0071 at 12.721 kb on - strand, within EX28DRAFT_0071 at 12.802 kb on - strand, within EX28DRAFT_0071 at 12.812 kb on - strand, within EX28DRAFT_0071 at 12.812 kb on - strand, within EX28DRAFT_0071 at 12.812 kb on - strand, within EX28DRAFT_0071 at 12.821 kb on + strand, within EX28DRAFT_0071 at 12.821 kb on + strand, within EX28DRAFT_0071 at 12.822 kb on - strand, within EX28DRAFT_0071 at 12.992 kb on - strand, within EX28DRAFT_0071 at 13.017 kb on + strand, within EX28DRAFT_0071 at 13.018 kb on - strand, within EX28DRAFT_0071 at 13.038 kb on + strand, within EX28DRAFT_0071 at 13.039 kb on - strand, within EX28DRAFT_0071 at 13.039 kb on - strand, within EX28DRAFT_0071 at 13.050 kb on - strand, within EX28DRAFT_0071 at 13.057 kb on + strand, within EX28DRAFT_0071 at 13.058 kb on - strand, within EX28DRAFT_0071 at 13.093 kb on + strand, within EX28DRAFT_0071 at 13.093 kb on + strand, within EX28DRAFT_0071 at 13.093 kb on + strand, within EX28DRAFT_0071 at 13.095 kb on + strand, within EX28DRAFT_0071 at 13.096 kb on - strand, within EX28DRAFT_0071 at 13.096 kb on - strand, within EX28DRAFT_0071 at 13.096 kb on - strand, within EX28DRAFT_0071 at 13.133 kb on + strand, within EX28DRAFT_0071 at 13.221 kb on + strand, within EX28DRAFT_0071 at 13.222 kb on - strand, within EX28DRAFT_0071 at 13.512 kb on + strand, within EX28DRAFT_0071 at 13.513 kb on - strand, within EX28DRAFT_0071 at 13.519 kb on - strand, within EX28DRAFT_0071 at 13.585 kb on + strand, within EX28DRAFT_0071 at 13.652 kb on - strand, within EX28DRAFT_0071 at 13.693 kb on + strand, within EX28DRAFT_0071 at 13.693 kb on + strand, within EX28DRAFT_0071 at 13.804 kb on - strand, within EX28DRAFT_0071 at 13.943 kb on - strand, within EX28DRAFT_0071 at 14.007 kb on + strand at 14.015 kb on - strand at 14.117 kb on + strand at 14.206 kb on + strand at 14.206 kb on + strand at 14.206 kb on + strand at 14.206 kb on + strand at 14.207 kb on - strand at 14.207 kb on - strand at 14.207 kb on - strand at 14.207 kb on - strand at 14.272 kb on - strand at 14.328 kb on + strand at 14.329 kb on - strand at 14.406 kb on + strand at 14.406 kb on + strand at 14.406 kb on + strand at 14.406 kb on + strand at 14.407 kb on - strand at 15.120 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 11,681 - +0.5 11,681 - +0.3 11,702 + +0.2 11,703 - -0.2 11,704 + +0.5 11,704 + +0.5 11,704 + +0.1 11,705 - -0.4 11,720 - -1.1 11,736 + +0.1 11,737 - -0.2 11,737 - +0.6 11,771 + -0.2 11,771 + -0.1 11,792 - EX28DRAFT_0070 0.12 -0.7 11,792 - EX28DRAFT_0070 0.12 -0.3 11,948 + EX28DRAFT_0070 0.30 -0.0 11,948 + EX28DRAFT_0070 0.30 +0.1 11,949 - EX28DRAFT_0070 0.31 +0.4 12,072 - EX28DRAFT_0070 0.45 -0.2 12,231 + EX28DRAFT_0070 0.63 +0.5 12,231 + EX28DRAFT_0070 0.63 -0.1 12,232 - EX28DRAFT_0070 0.63 -0.3 12,233 + EX28DRAFT_0070 0.64 -0.2 12,252 - EX28DRAFT_0070 0.66 -0.3 12,386 + EX28DRAFT_0070 0.81 +0.2 12,386 + EX28DRAFT_0070 0.81 -1.0 12,507 + +0.3 12,539 + -0.9 12,539 + +0.2 12,543 + -0.2 12,543 + -0.3 12,544 - -1.1 12,604 + +0.1 12,606 + +0.2 12,606 + -0.2 12,606 + +0.2 12,606 + +0.5 12,628 + -0.2 12,718 - EX28DRAFT_0071 0.12 -1.1 12,720 + EX28DRAFT_0071 0.12 -0.2 12,721 - EX28DRAFT_0071 0.12 -0.2 12,802 - EX28DRAFT_0071 0.17 -1.5 12,812 - EX28DRAFT_0071 0.17 -1.9 12,812 - EX28DRAFT_0071 0.17 +0.9 12,812 - EX28DRAFT_0071 0.17 +0.2 12,821 + EX28DRAFT_0071 0.18 +0.5 12,821 + EX28DRAFT_0071 0.18 -2.5 12,822 - EX28DRAFT_0071 0.18 +1.4 12,992 - EX28DRAFT_0071 0.29 +0.3 13,017 + EX28DRAFT_0071 0.30 -0.1 13,018 - EX28DRAFT_0071 0.30 +0.9 13,038 + EX28DRAFT_0071 0.31 +0.6 13,039 - EX28DRAFT_0071 0.31 +0.4 13,039 - EX28DRAFT_0071 0.31 -2.5 13,050 - EX28DRAFT_0071 0.32 -0.0 13,057 + EX28DRAFT_0071 0.33 -1.2 13,058 - EX28DRAFT_0071 0.33 +1.1 13,093 + EX28DRAFT_0071 0.35 -0.5 13,093 + EX28DRAFT_0071 0.35 -1.6 13,093 + EX28DRAFT_0071 0.35 -0.2 13,095 + EX28DRAFT_0071 0.35 +0.5 13,096 - EX28DRAFT_0071 0.35 -0.3 13,096 - EX28DRAFT_0071 0.35 +0.3 13,096 - EX28DRAFT_0071 0.35 +0.9 13,133 + EX28DRAFT_0071 0.37 +0.7 13,221 + EX28DRAFT_0071 0.43 +0.6 13,222 - EX28DRAFT_0071 0.43 +0.1 13,512 + EX28DRAFT_0071 0.61 -0.2 13,513 - EX28DRAFT_0071 0.61 -1.6 13,519 - EX28DRAFT_0071 0.61 +0.2 13,585 + EX28DRAFT_0071 0.65 -1.1 13,652 - EX28DRAFT_0071 0.69 +0.5 13,693 + EX28DRAFT_0071 0.72 +0.5 13,693 + EX28DRAFT_0071 0.72 -0.1 13,804 - EX28DRAFT_0071 0.79 -2.5 13,943 - EX28DRAFT_0071 0.87 -0.8 14,007 + -0.3 14,015 - +0.7 14,117 + -1.3 14,206 + +0.2 14,206 + -0.0 14,206 + +0.2 14,206 + +0.8 14,207 - -0.0 14,207 - +0.1 14,207 - -0.8 14,207 - -0.1 14,272 - -0.0 14,328 + -1.1 14,329 - +1.2 14,406 + +0.1 14,406 + -0.8 14,406 + +0.0 14,406 + +0.2 14,407 - -0.1 15,120 + -0.8
Or see this region's nucleotide sequence