Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_R0082
Experiment: PYE with CHIR-090 4 ug/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | PYE with CHIR-090 4 ug/mL |
---|---|---|---|---|---|
remove | |||||
3,791,352 | + | CCNA_03637 | 0.40 | -0.3 | |
3,791,685 | - | CCNA_03637 | 0.61 | -0.9 | |
3,791,725 | - | CCNA_03637 | 0.64 | +0.3 | |
3,791,759 | - | CCNA_03637 | 0.66 | +0.3 | |
3,791,907 | - | CCNA_03637 | 0.76 | +0.2 | |
3,791,992 | + | CCNA_03637 | 0.82 | -1.3 | |
3,792,086 | + | CCNA_03637 | 0.88 | +0.2 | |
3,792,086 | + | CCNA_03637 | 0.88 | -0.7 | |
3,792,086 | + | CCNA_03637 | 0.88 | +0.0 | |
3,792,094 | - | CCNA_03637 | 0.88 | +0.3 | |
3,792,096 | + | CCNA_03637 | 0.88 | +0.2 | |
3,792,096 | + | CCNA_03637 | 0.88 | +0.0 | |
3,792,104 | - | CCNA_03637 | 0.89 | +0.3 | |
3,792,107 | + | CCNA_03637 | 0.89 | +0.2 | |
3,792,126 | + | +0.2 | |||
3,792,131 | + | -0.0 | |||
3,792,142 | - | +0.7 | |||
3,792,376 | - | CCNA_R0082 | 0.58 | +0.4 | |
3,792,618 | - | -0.4 |
Or see this region's nucleotide sequence