Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03483

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,644,577	+		CCNA_03481	0.66	-0.2
3,644,585	-		CCNA_03481	0.67	-0.2
3,644,585	-		CCNA_03481	0.67	-0.5
3,644,585	-		CCNA_03481	0.67	-1.2
3,644,701	+				+0.2
3,644,701	+				+0.6
3,644,710	-				-0.2
3,644,712	+				+0.8
3,644,720	-				+0.3
3,644,776	+				-0.0
3,644,828	-				-1.0
3,644,869	-				-1.4
3,644,895	-		CCNA_03482	0.10	+0.9
3,644,898	+		CCNA_03482	0.11	+0.1
3,644,956	-		CCNA_03482	0.19	+0.4
3,644,977	-		CCNA_03482	0.21	+0.8
3,644,982	-		CCNA_03482	0.22	-0.5
3,644,987	-		CCNA_03482	0.23	-0.3
3,644,997	+		CCNA_03482	0.24	+0.0
3,645,040	+		CCNA_03482	0.30	-0.7
3,645,040	+		CCNA_03482	0.30	-0.8
3,645,048	-		CCNA_03482	0.31	+2.3
3,645,048	-		CCNA_03482	0.31	+0.9
3,645,048	-		CCNA_03482	0.31	+0.1
3,645,078	+		CCNA_03482	0.35	-0.2
3,645,123	+		CCNA_03482	0.40	+0.1
3,645,123	+		CCNA_03482	0.40	+1.1
3,645,131	-		CCNA_03482	0.41	+0.6
3,645,131	-		CCNA_03482	0.41	+0.2
3,645,131	-		CCNA_03482	0.41	-0.1
3,645,131	-		CCNA_03482	0.41	+0.1
3,645,131	-		CCNA_03482	0.41	-0.0
3,645,131	-		CCNA_03482	0.41	+0.4
3,645,270	-		CCNA_03482	0.60	-0.9
3,645,270	-		CCNA_03482	0.60	-0.7
3,645,272	+		CCNA_03482	0.60	+0.4
3,645,365	+		CCNA_03482	0.72	+1.7
3,645,373	-		CCNA_03482	0.73	+0.0
3,645,393	-		CCNA_03482	0.76	-0.0
3,645,408	-		CCNA_03482	0.78	+0.6
3,645,421	-		CCNA_03482	0.80	+0.6
3,645,465	-		CCNA_03482	0.85	+0.5
3,645,497	-		CCNA_03482	0.90	+0.2
3,645,504	+				+0.4
3,645,510	+				-2.9
3,645,518	+				+0.0
3,645,526	-				+0.4
3,645,583	+				-0.7
3,645,591	-				+0.3
3,645,618	+				+0.1
3,645,618	+				+0.5
3,645,618	+				+1.1
3,645,626	-				-1.1
3,645,626	-				+1.4
3,645,628	+				-0.4
3,645,636	-				+0.9
3,645,636	-				+0.4
3,645,636	-				-0.2
3,645,656	+				+0.4
3,645,656	+				+0.7
3,645,664	-				-1.2
3,645,667	+				-0.0
3,645,715	-		CCNA_03483	0.15	+0.1
3,645,723	-		CCNA_03483	0.16	+0.4
3,645,733	-		CCNA_03483	0.17	+0.3
3,645,735	+		CCNA_03483	0.17	-1.0
3,645,743	-		CCNA_03483	0.18	-1.0
3,645,750	+		CCNA_03483	0.19	-0.1
3,645,757	+		CCNA_03483	0.19	-0.8
3,645,765	-		CCNA_03483	0.20	+0.0
3,645,781	+		CCNA_03483	0.22	-0.8
3,645,810	+		CCNA_03483	0.25	+1.3
3,645,844	+		CCNA_03483	0.29	+0.1
3,645,852	-		CCNA_03483	0.30	+0.3
3,645,852	-		CCNA_03483	0.30	+0.3
3,645,852	-		CCNA_03483	0.30	+0.3
3,645,852	-		CCNA_03483	0.30	+0.2
3,645,883	+		CCNA_03483	0.33	+0.8
3,645,970	-		CCNA_03483	0.42	-1.7
3,645,981	-		CCNA_03483	0.43	-0.3
3,645,985	+		CCNA_03483	0.44	+0.4
3,646,050	+		CCNA_03483	0.50	-0.1
3,646,055	+		CCNA_03483	0.51	+0.4
3,646,058	-		CCNA_03483	0.51	+0.1
3,646,062	+		CCNA_03483	0.52	-0.4
3,646,074	-		CCNA_03483	0.53	-0.1
3,646,077	+		CCNA_03483	0.53	-0.9
3,646,179	+		CCNA_03483	0.64	+0.6
3,646,217	-		CCNA_03483	0.68	-1.0
3,646,217	-		CCNA_03483	0.68	+0.1
3,646,236	-		CCNA_03483	0.70	+1.2
3,646,249	-		CCNA_03483	0.72	+0.5
3,646,256	+		CCNA_03483	0.72	+1.2
3,646,258	-		CCNA_03483	0.72	+0.2
3,646,295	+		CCNA_03483	0.76	+0.1
3,646,295	+		CCNA_03483	0.76	-0.8
3,646,303	-		CCNA_03483	0.77	+0.3
3,646,316	-		CCNA_03483	0.79	+0.6
3,646,351	+		CCNA_03483	0.82	-0.8
3,646,356	+		CCNA_03483	0.83	-1.0
3,646,361	+		CCNA_03483	0.83	-0.8
3,646,373	-		CCNA_03483	0.85	-0.1
3,646,374	-		CCNA_03483	0.85	+0.5
3,646,388	-		CCNA_03483	0.86	+0.7
3,646,392	-		CCNA_03483	0.87	+0.4
3,646,401	+		CCNA_03483	0.88	-1.3
3,646,401	+		CCNA_03483	0.88	-0.7
3,646,462	-				-0.6
3,646,465	-				-1.0
3,646,468	+				+1.2
3,646,468	+				+0.7
3,646,470	-				+0.4
3,646,476	-				+1.0
3,646,476	-				+0.3
3,646,481	-				+0.4
3,646,481	-				+0.0
3,646,481	-				+1.0
3,646,507	+				-0.4
3,646,512	+				-0.5
3,646,530	-				-0.2
3,646,557	+				+0.2
3,646,557	+				+0.1
3,646,557	+				-0.1
3,646,559	+				+0.9
3,646,565	-				+0.1
3,646,567	+				-0.4
3,646,584	+				-1.8
3,646,632	-				-0.1
3,646,632	-				-0.3
3,646,641	+				+0.5
3,646,650	-				+0.5
3,646,723	+		CCNA_03484	0.22	-0.5
3,646,803	+		CCNA_03484	0.39	+0.2
3,646,811	-		CCNA_03484	0.41	-0.3
3,646,813	+		CCNA_03484	0.41	-0.5
3,646,813	+		CCNA_03484	0.41	-0.9
3,646,818	+		CCNA_03484	0.42	-0.6
3,646,834	+		CCNA_03484	0.46	+0.4
3,646,878	-		CCNA_03484	0.55	+1.3
3,646,889	+		CCNA_03484	0.58	-1.0
3,646,890	-		CCNA_03484	0.58	+0.5
3,646,897	-		CCNA_03484	0.59	-0.0
3,646,907	-		CCNA_03484	0.62	+0.2
3,646,907	-		CCNA_03484	0.62	-0.1
3,646,907	-		CCNA_03484	0.62	-0.1
3,647,049	+				-0.5
3,647,057	-				+0.3
3,647,119	+				+0.4
3,647,144	-				+0.5
3,647,144	-				+0.4
3,647,212	-		CCNA_03485	0.13	+0.0
3,647,238	+		CCNA_03485	0.15	+0.6
3,647,238	+		CCNA_03485	0.15	-0.3
3,647,240	+		CCNA_03485	0.16	+0.6
3,647,240	+		CCNA_03485	0.16	-0.2
3,647,246	-		CCNA_03485	0.16	+0.2
3,647,246	-		CCNA_03485	0.16	-0.0
3,647,246	-		CCNA_03485	0.16	+0.1
3,647,273	+		CCNA_03485	0.19	+0.3
3,647,273	+		CCNA_03485	0.19	-0.8
3,647,273	+		CCNA_03485	0.19	-0.4
3,647,280	+		CCNA_03485	0.20	+0.3
3,647,280	+		CCNA_03485	0.20	-0.2
3,647,285	+		CCNA_03485	0.20	+0.0
3,647,285	+		CCNA_03485	0.20	-0.3
3,647,350	-		CCNA_03485	0.27	-0.8
3,647,395	-		CCNA_03485	0.32	+0.3
3,647,395	-		CCNA_03485	0.32	-0.1
3,647,397	-		CCNA_03485	0.32	+1.3
3,647,402	+		CCNA_03485	0.32	+0.2
3,647,477	-		CCNA_03485	0.40	-0.0
3,647,498	+		CCNA_03485	0.42	-0.9
3,647,501	-		CCNA_03485	0.42	+0.7
3,647,506	-		CCNA_03485	0.43	+0.3