Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03245

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,410,059	+		CCNA_03243	0.89	+2.1
3,410,070	+				-1.0
3,410,078	-				+0.1
3,410,153	-				-0.4
3,410,158	-				+0.2
3,410,204	+				-0.6
3,410,214	+				-0.5
3,410,222	-				+0.7
3,410,228	+				-1.5
3,410,271	+				+0.7
3,410,275	-				-0.4
3,410,296	+				-1.8
3,410,366	+		CCNA_03244	0.14	+0.4
3,410,366	+		CCNA_03244	0.14	+0.1
3,410,366	+		CCNA_03244	0.14	-0.4
3,410,517	-		CCNA_03244	0.36	+0.3
3,410,517	-		CCNA_03244	0.36	+0.4
3,410,600	+		CCNA_03244	0.48	+0.7
3,410,600	+		CCNA_03244	0.48	-2.1
3,410,655	+		CCNA_03244	0.57	+1.6
3,410,655	+		CCNA_03244	0.57	+0.3
3,410,655	+		CCNA_03244	0.57	-0.4
3,410,655	+		CCNA_03244	0.57	-1.8
3,410,666	+		CCNA_03244	0.58	-0.3
3,410,666	+		CCNA_03244	0.58	-1.3
3,410,666	+		CCNA_03244	0.58	+0.9
3,410,674	-		CCNA_03244	0.59	+0.3
3,410,674	-		CCNA_03244	0.59	+0.2
3,410,674	-		CCNA_03244	0.59	-0.3
3,410,674	-		CCNA_03244	0.59	+0.6
3,410,674	-		CCNA_03244	0.59	+0.8
3,410,674	-		CCNA_03244	0.59	+0.6
3,410,674	-		CCNA_03244	0.59	-0.6
3,410,699	-		CCNA_03244	0.63	-0.1
3,410,708	-		CCNA_03244	0.64	+0.7
3,410,745	-		CCNA_03244	0.70	+0.6
3,410,759	+		CCNA_03244	0.72	+0.2
3,410,795	+		CCNA_03244	0.77	-1.1
3,410,803	-		CCNA_03244	0.79	+1.0
3,410,843	+		CCNA_03244	0.85	-0.1
3,410,843	-		CCNA_03244	0.85	+0.4
3,410,848	+		CCNA_03244	0.85	-0.7
3,410,856	-		CCNA_03244	0.86	+0.0
3,410,877	-		CCNA_03244	0.90	+0.4
3,410,888	+				+0.7
3,410,896	-				+0.1
3,410,910	-				-1.2
3,410,912	+				+0.5
3,410,920	-				+0.4
3,410,938	+				-1.2
3,410,938	+				+0.5
3,411,014	+				-0.3
3,411,022	-				-0.8
3,411,028	-				+0.3
3,411,086	+				-0.1
3,411,141	+				-0.5
3,411,141	+				-0.4
3,411,141	+				-0.4
3,411,141	+				-0.7
3,411,141	+				-0.1
3,411,141	+				+0.2
3,411,141	+				-0.7
3,411,141	+				-0.5
3,411,141	+				+0.3
3,411,149	-		CCNA_03245	0.10	+0.7
3,411,149	-		CCNA_03245	0.10	+0.9
3,411,149	-		CCNA_03245	0.10	-0.3
3,411,149	-		CCNA_03245	0.10	+0.0
3,411,149	-		CCNA_03245	0.10	-0.4
3,411,168	+		CCNA_03245	0.12	-0.3
3,411,174	+		CCNA_03245	0.12	-1.4
3,411,182	-		CCNA_03245	0.13	+0.0
3,411,182	-		CCNA_03245	0.13	-0.2
3,411,182	-		CCNA_03245	0.13	-0.3
3,411,184	-		CCNA_03245	0.13	+0.2
3,411,255	+		CCNA_03245	0.18	+0.2
3,411,262	+		CCNA_03245	0.19	+0.6
3,411,262	+		CCNA_03245	0.19	-1.6
3,411,270	-		CCNA_03245	0.19	+0.3
3,411,270	-		CCNA_03245	0.19	+0.7
3,411,309	+		CCNA_03245	0.22	-0.3
3,411,317	-		CCNA_03245	0.23	+0.0
3,411,333	+		CCNA_03245	0.24	-0.8
3,411,368	+		CCNA_03245	0.27	+0.1
3,411,386	-		CCNA_03245	0.28	-0.4
3,411,386	-		CCNA_03245	0.28	+0.3
3,411,390	+		CCNA_03245	0.28	+1.3
3,411,396	+		CCNA_03245	0.29	-0.2
3,411,400	+		CCNA_03245	0.29	+0.6
3,411,422	+		CCNA_03245	0.31	+0.3
3,411,422	+		CCNA_03245	0.31	+0.3
3,411,423	+		CCNA_03245	0.31	-0.5
3,411,445	-		CCNA_03245	0.32	+0.3
3,411,462	-		CCNA_03245	0.34	+0.0
3,411,498	+		CCNA_03245	0.36	+0.1
3,411,556	+		CCNA_03245	0.41	+0.4
3,411,564	-		CCNA_03245	0.41	-1.7
3,411,564	-		CCNA_03245	0.41	-1.2
3,411,564	-		CCNA_03245	0.41	-1.2
3,411,564	-		CCNA_03245	0.41	-0.9
3,411,564	-		CCNA_03245	0.41	-0.3
3,411,569	+		CCNA_03245	0.42	+0.0
3,411,575	+		CCNA_03245	0.42	-0.8
3,411,583	-		CCNA_03245	0.43	-0.8
3,411,585	-		CCNA_03245	0.43	-0.0
3,411,594	+		CCNA_03245	0.44	+0.4
3,411,594	+		CCNA_03245	0.44	-0.1
3,411,594	+		CCNA_03245	0.44	+0.7
3,411,602	-		CCNA_03245	0.44	-0.2
3,411,602	-		CCNA_03245	0.44	+0.3
3,411,602	-		CCNA_03245	0.44	-0.1
3,411,602	-		CCNA_03245	0.44	-0.7
3,411,621	+		CCNA_03245	0.46	-0.5
3,411,652	+		CCNA_03245	0.48	+0.3
3,411,659	-		CCNA_03245	0.48	-0.2
3,411,719	+		CCNA_03245	0.53	+0.1
3,411,773	-		CCNA_03245	0.57	-0.4
3,411,801	-		CCNA_03245	0.59	+0.1
3,411,811	-		CCNA_03245	0.60	+0.4
3,411,846	+		CCNA_03245	0.63	-0.5
3,411,854	-		CCNA_03245	0.63	-1.1
3,411,854	-		CCNA_03245	0.63	-0.8
3,411,866	+		CCNA_03245	0.64	+0.7
3,411,867	+		CCNA_03245	0.64	+0.8
3,411,869	-		CCNA_03245	0.64	-1.4
3,411,875	-		CCNA_03245	0.65	+0.1
3,411,882	+		CCNA_03245	0.65	+0.3
3,411,890	-		CCNA_03245	0.66	+0.1
3,411,917	+		CCNA_03245	0.68	-1.1
3,411,917	+		CCNA_03245	0.68	-0.3
3,411,925	-		CCNA_03245	0.68	-0.6
3,411,948	-		CCNA_03245	0.70	-0.0
3,411,953	+		CCNA_03245	0.71	+0.4
3,411,961	-		CCNA_03245	0.71	+1.3
3,411,962	+		CCNA_03245	0.71	+0.6
3,411,978	+		CCNA_03245	0.72	+0.2
3,412,027	-		CCNA_03245	0.76	-0.4
3,412,040	+		CCNA_03245	0.77	-0.1
3,412,089	+		CCNA_03245	0.81	-0.6
3,412,097	-		CCNA_03245	0.81	+0.2
3,412,140	-		CCNA_03245	0.85	+0.3
3,412,156	+		CCNA_03245	0.86	+0.5
3,412,156	+		CCNA_03245	0.86	-0.5
3,412,164	-		CCNA_03245	0.86	+0.5
3,412,177	+		CCNA_03245	0.87	-0.2
3,412,213	+				-0.3
3,412,224	+				+0.3
3,412,227	+				+1.1
3,412,227	+				-0.4
3,412,227	+				-0.4
3,412,232	-				-0.7
3,412,235	-				-0.9
3,412,235	-				+0.6
3,412,314	+				-0.6
3,412,328	+				-0.3
3,412,331	-				+0.1
3,412,331	-				-0.8
3,412,346	-				-1.3
3,412,346	-				-0.9
3,412,348	+				-0.3
3,412,473	+				+0.5
3,412,486	-		CCNA_03246	0.11	-1.1
3,412,490	+		CCNA_03246	0.11	+0.1
3,412,498	+		CCNA_03246	0.12	-2.1
3,412,503	+		CCNA_03246	0.12	-0.3
3,412,511	-		CCNA_03246	0.13	-0.3
3,412,521	-		CCNA_03246	0.14	+0.1
3,412,581	-		CCNA_03246	0.20	-0.7
3,412,602	-		CCNA_03246	0.22	-1.2
3,412,639	+		CCNA_03246	0.25	-0.9
3,412,640	-		CCNA_03246	0.25	-0.1
3,412,706	-		CCNA_03246	0.31	+0.5
3,412,725	+		CCNA_03246	0.33	+0.1
3,412,733	-		CCNA_03246	0.34	-0.2
3,412,768	+		CCNA_03246	0.37	+0.5
3,412,768	+		CCNA_03246	0.37	-0.6
3,412,768	+		CCNA_03246	0.37	+0.2
3,412,781	-		CCNA_03246	0.38	+0.3
3,412,812	-		CCNA_03246	0.41	-1.0
3,412,824	+		CCNA_03246	0.43	-1.7
3,412,829	+		CCNA_03246	0.43	+0.6
3,412,829	+		CCNA_03246	0.43	+1.5
3,412,837	-		CCNA_03246	0.44	-0.0
3,412,837	-		CCNA_03246	0.44	-0.7
3,412,841	+		CCNA_03246	0.44	+0.2
3,412,841	+		CCNA_03246	0.44	-0.6
3,412,849	-		CCNA_03246	0.45	-0.4
3,412,849	-		CCNA_03246	0.45	+0.1
3,412,874	+		CCNA_03246	0.47	-0.0
3,412,882	-		CCNA_03246	0.48	-0.1
3,412,889	+		CCNA_03246	0.49	-0.5
3,412,905	+		CCNA_03246	0.50	-0.5
3,412,943	+		CCNA_03246	0.54	+0.1
3,412,949	-		CCNA_03246	0.54	+0.5
3,412,951	+		CCNA_03246	0.54	-1.2
3,412,951	+		CCNA_03246	0.54	-1.7
3,412,951	-		CCNA_03246	0.54	-0.1
3,412,951	-		CCNA_03246	0.54	+0.3
3,412,966	-		CCNA_03246	0.56	-0.3
3,412,971	-		CCNA_03246	0.56	+0.3
3,413,002	-		CCNA_03246	0.59	+0.3
3,413,023	+		CCNA_03246	0.61	-0.4
3,413,084	+		CCNA_03246	0.67	-0.4
3,413,092	-		CCNA_03246	0.68	+0.2
3,413,210	-		CCNA_03246	0.79	+0.0
3,413,217	+		CCNA_03246	0.79	-1.5
3,413,217	+		CCNA_03246	0.79	-2.0
3,413,225	-		CCNA_03246	0.80	-0.2
3,413,249	-		CCNA_03246	0.82	+1.4
3,413,249	-		CCNA_03246	0.82	-1.2
3,413,249	-		CCNA_03246	0.82	-0.3
3,413,303	+		CCNA_03246	0.88	+0.8
3,413,303	+		CCNA_03246	0.88	-2.1
3,413,303	+		CCNA_03246	0.88	+0.4
3,413,311	-		CCNA_03246	0.88	+0.2
3,413,311	-		CCNA_03246	0.88	-0.7
3,413,331	+				-2.4
3,413,339	-				-0.6
3,413,339	-				-0.3