Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_03068

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,219,098	+		CCNA_03066	0.85	+0.3
3,219,098	+		CCNA_03066	0.85	-0.0
3,219,098	+		CCNA_03066	0.85	+0.5
3,219,098	+		CCNA_03066	0.85	-0.5
3,219,098	+		CCNA_03066	0.85	-0.4
3,219,098	+		CCNA_03066	0.85	+0.2
3,219,098	+		CCNA_03066	0.85	-0.9
3,219,101	-		CCNA_03066	0.85	+1.5
3,219,106	+		CCNA_03066	0.85	-0.5
3,219,106	-		CCNA_03066	0.85	+0.1
3,219,106	-		CCNA_03066	0.85	+0.3
3,219,106	-		CCNA_03066	0.85	-0.2
3,219,166	+		CCNA_03066	0.88	-1.1
3,219,166	+		CCNA_03066	0.88	-0.9
3,219,166	+		CCNA_03066	0.88	+0.0
3,219,174	-		CCNA_03066	0.88	+0.6
3,219,190	+		CCNA_03066	0.89	+0.5
3,219,195	+		CCNA_03066	0.89	-0.6
3,219,214	+				-0.5
3,219,229	+				-0.3
3,219,229	+				+0.7
3,219,232	-				+0.3
3,219,249	+				+0.9
3,219,250	-				+0.1
3,219,262	+				+0.1
3,219,262	+				-1.3
3,219,273	+				-0.3
3,219,313	+				-2.4
3,219,313	+				-0.5
3,219,313	+				-0.4
3,219,317	+				+0.2
3,219,320	-				-0.4
3,219,365	+				+0.4
3,219,368	-				+1.4
3,219,374	-				-0.4
3,219,376	+				+0.1
3,219,376	+				+0.7
3,219,376	+				-1.7
3,219,376	+				-0.7
3,219,384	-				-1.1
3,219,384	-				+0.4
3,219,384	-				+2.0
3,219,384	-				-1.9
3,219,407	-				+0.3
3,219,452	+				+0.4
3,219,460	-				-0.1
3,219,499	+				-0.1
3,219,509	-				-2.5
3,219,544	+				-1.2
3,219,552	-				-1.5
3,219,552	-				-1.6
3,219,555	+				-1.0
3,219,568	-				+0.3
3,219,581	-				+0.7
3,219,588	+				-1.5
3,219,620	+		CCNA_03067	0.15	-0.2
3,219,620	+		CCNA_03067	0.15	-1.7
3,219,620	+		CCNA_03067	0.15	+0.4
3,219,620	+		CCNA_03067	0.15	-0.6
3,219,620	+		CCNA_03067	0.15	-0.6
3,219,628	-		CCNA_03067	0.17	+0.2
3,219,628	-		CCNA_03067	0.17	+0.7
3,219,628	-		CCNA_03067	0.17	+0.2
3,219,663	+		CCNA_03067	0.25	+0.4
3,219,669	+		CCNA_03067	0.27	-0.8
3,219,670	+		CCNA_03067	0.27	-1.3
3,219,676	+		CCNA_03067	0.29	+0.3
3,219,744	-		CCNA_03067	0.46	+0.3
3,219,825	+		CCNA_03067	0.66	-0.3
3,219,833	-		CCNA_03067	0.68	+0.3
3,219,833	-		CCNA_03067	0.68	+0.1
3,219,834	-		CCNA_03067	0.68	+0.4
3,219,900	+		CCNA_03067	0.85	-0.3
3,219,949	-				-1.5
3,220,031	+				-0.9
3,220,031	+				+0.2
3,220,039	-				+0.8
3,220,039	-				+0.5
3,220,039	-				-0.7
3,220,039	-				+2.4
3,220,039	-				-0.2
3,220,041	-				-3.0
3,220,070	+				-0.2
3,220,077	+				-0.2
3,220,077	+				-0.8
3,220,077	+				-0.6
3,220,077	+				-1.2
3,220,077	+				-0.4
3,220,085	-				+0.2
3,220,085	-				-0.3
3,220,085	-				-0.1
3,220,123	-				-0.7
3,220,128	-				-0.4
3,220,135	+		CCNA_03068	0.10	+0.2
3,220,195	+		CCNA_03068	0.20	-0.7
3,220,239	+		CCNA_03068	0.27	+0.1
3,220,292	-		CCNA_03068	0.35	+0.5
3,220,292	-		CCNA_03068	0.35	-0.4
3,220,296	+		CCNA_03068	0.36	-0.6
3,220,329	-		CCNA_03068	0.41	+0.3
3,220,366	+		CCNA_03068	0.47	+1.0
3,220,366	+		CCNA_03068	0.47	+0.1
3,220,366	+		CCNA_03068	0.47	+1.1
3,220,366	+		CCNA_03068	0.47	-0.4
3,220,366	+		CCNA_03068	0.47	-0.4
3,220,384	-		CCNA_03068	0.50	+0.2
3,220,386	+		CCNA_03068	0.50	+0.5
3,220,386	+		CCNA_03068	0.50	-0.1
3,220,394	-		CCNA_03068	0.51	-0.4
3,220,410	-		CCNA_03068	0.54	+2.1
3,220,446	+		CCNA_03068	0.59	-1.5
3,220,524	+		CCNA_03068	0.72	+1.1
3,220,526	-		CCNA_03068	0.72	-0.1
3,220,533	-		CCNA_03068	0.73	-0.2
3,220,537	+		CCNA_03068	0.74	-0.8
3,220,558	+		CCNA_03068	0.77	-1.2
3,220,609	-		CCNA_03068	0.85	-0.4
3,220,629	+		CCNA_03068	0.88	+0.6
3,220,630	+		CCNA_03068	0.89	-2.1
3,220,630	+		CCNA_03068	0.89	-1.5
3,220,630	+		CCNA_03068	0.89	-2.0
3,220,630	+		CCNA_03068	0.89	+0.4
3,220,630	+		CCNA_03068	0.89	-1.3
3,220,638	-		CCNA_03068	0.90	-0.4
3,220,672	+				-0.7
3,220,715	+				-2.5
3,220,749	+		CCNA_03069	0.14	+0.1
3,220,749	+		CCNA_03069	0.14	-1.2
3,220,749	+		CCNA_03069	0.14	-0.5
3,220,749	+		CCNA_03069	0.14	-0.3
3,220,749	+		CCNA_03069	0.14	-0.5
3,220,749	+		CCNA_03069	0.14	-0.4
3,220,749	+		CCNA_03069	0.14	+0.3
3,220,757	-		CCNA_03069	0.16	-0.1
3,220,757	-		CCNA_03069	0.16	-0.0
3,220,757	-		CCNA_03069	0.16	+0.9
3,220,757	-		CCNA_03069	0.16	-0.8
3,220,791	-		CCNA_03069	0.25	+0.5
3,220,860	-		CCNA_03069	0.44	-2.1
3,220,945	+		CCNA_03069	0.66	+0.7
3,220,973	+		CCNA_03069	0.74	+0.3
3,221,070	+				+0.3
3,221,070	+				-0.1
3,221,070	+				+0.3
3,221,078	-				-0.1
3,221,083	-				+0.2
3,221,114	-		CCNA_03070	0.19	-0.1
3,221,129	-		CCNA_03070	0.26	-0.7
3,221,152	-		CCNA_03070	0.37	+0.3
3,221,174	-		CCNA_03070	0.47	-0.1
3,221,174	-		CCNA_03070	0.47	-0.7
3,221,270	-				-0.7
3,221,316	-				-2.3
3,221,339	+				+0.8
3,221,367	+				+0.4
3,221,367	+				+0.1
3,221,367	+				-1.6
3,221,440	-				-0.4
3,221,482	+				-0.2
3,221,482	+				+0.4
3,221,490	-				-0.4
3,221,490	-				+0.2
3,221,516	-				-0.1
3,221,518	+				-0.1
3,221,625	+				+0.9
3,221,641	-		CCNA_03071	0.11	+0.2