Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_02940

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
3,098,794	+		CCNA_02938	0.16	-0.5
3,098,825	-		CCNA_02938	0.22	-0.8
3,098,863	+		CCNA_02938	0.28	+0.3
3,098,877	-		CCNA_02938	0.31	+0.4
3,098,887	+		CCNA_02938	0.33	+0.2
3,098,935	-		CCNA_02938	0.41	-1.6
3,098,942	-		CCNA_02938	0.42	+1.4
3,098,942	-		CCNA_02938	0.42	-1.4
3,098,949	+		CCNA_02938	0.43	-0.1
3,098,994	-		CCNA_02938	0.51	-0.3
3,099,031	-		CCNA_02938	0.58	-0.9
3,099,059	+		CCNA_02938	0.62	+0.6
3,099,060	-		CCNA_02938	0.63	+0.8
3,099,143	-		CCNA_02938	0.77	+0.4
3,099,145	+		CCNA_02938	0.77	-0.7
3,099,145	+		CCNA_02938	0.77	+1.1
3,099,164	+		CCNA_02938	0.81	-0.1
3,099,172	-		CCNA_02938	0.82	-2.1
3,099,269	-				-0.4
3,099,275	+				+0.5
3,099,277	+				+0.9
3,099,285	-				-0.9
3,099,285	-				-0.3
3,099,295	+				+0.2
3,099,309	+				-0.1
3,099,310	+				-0.1
3,099,311	+				+0.2
3,099,319	-				-0.3
3,099,319	-				-1.0
3,099,319	-				-1.7
3,099,363	-				-0.2
3,099,379	+				-0.1
3,099,410	+				+0.0
3,099,433	-				+0.0
3,099,450	-				-0.6
3,099,501	+		CCNA_02939	0.20	+0.1
3,099,503	-		CCNA_02939	0.20	-0.9
3,099,514	-		CCNA_02939	0.23	+0.9
3,099,583	-		CCNA_02939	0.43	-1.1
3,099,593	-		CCNA_02939	0.45	-0.3
3,099,602	-		CCNA_02939	0.48	-0.5
3,099,668	-		CCNA_02939	0.66	+0.2
3,099,691	+		CCNA_02939	0.73	-0.2
3,099,695	-		CCNA_02939	0.74	-0.6
3,099,699	-		CCNA_02939	0.75	+0.4
3,099,699	-		CCNA_02939	0.75	-0.5
3,099,708	+		CCNA_02939	0.78	-0.1
3,099,740	-		CCNA_02939	0.87	-0.7
3,099,781	+				-0.2
3,099,797	+				+0.2
3,099,798	+				+0.1
3,099,835	-				-1.1
3,099,913	-				-0.3
3,099,923	+				-0.1
3,099,928	+				+1.1
3,099,936	-				-0.1
3,099,936	-				+1.1
3,099,936	-				+1.0
3,099,942	-				-0.8
3,099,951	-		CCNA_02940	0.10	-0.0
3,099,996	+		CCNA_02940	0.13	-0.2
3,100,020	+		CCNA_02940	0.15	+0.4
3,100,028	-		CCNA_02940	0.15	+1.0
3,100,039	+		CCNA_02940	0.16	-0.1
3,100,047	-		CCNA_02940	0.16	-1.4
3,100,090	+		CCNA_02940	0.19	+0.1
3,100,098	-		CCNA_02940	0.20	-1.6
3,100,134	-		CCNA_02940	0.22	-1.8
3,100,163	+		CCNA_02940	0.24	+0.1
3,100,163	+		CCNA_02940	0.24	-1.0
3,100,163	+		CCNA_02940	0.24	+0.6
3,100,163	+		CCNA_02940	0.24	+0.5
3,100,163	+		CCNA_02940	0.24	-2.9
3,100,163	+		CCNA_02940	0.24	+0.0
3,100,168	+		CCNA_02940	0.24	+0.9
3,100,168	+		CCNA_02940	0.24	+0.5
3,100,168	+		CCNA_02940	0.24	-0.0
3,100,168	+		CCNA_02940	0.24	+1.3
3,100,171	-		CCNA_02940	0.24	+0.1
3,100,171	-		CCNA_02940	0.24	-0.7
3,100,171	-		CCNA_02940	0.24	-2.1
3,100,173	+		CCNA_02940	0.24	+0.7
3,100,173	+		CCNA_02940	0.24	-0.2
3,100,173	+		CCNA_02940	0.24	+0.0
3,100,173	+		CCNA_02940	0.24	+0.6
3,100,173	+		CCNA_02940	0.24	+0.3
3,100,176	-		CCNA_02940	0.24	-0.4
3,100,176	-		CCNA_02940	0.24	-0.7
3,100,181	-		CCNA_02940	0.25	-2.0
3,100,181	-		CCNA_02940	0.25	-0.5
3,100,316	-		CCNA_02940	0.33	-0.2
3,100,323	+		CCNA_02940	0.34	+0.1
3,100,331	-		CCNA_02940	0.34	-1.9
3,100,331	-		CCNA_02940	0.34	-0.3
3,100,331	-		CCNA_02940	0.34	-1.4
3,100,331	-		CCNA_02940	0.34	+1.8
3,100,331	-		CCNA_02940	0.34	-0.0
3,100,331	-		CCNA_02940	0.34	+1.3
3,100,331	-		CCNA_02940	0.34	-1.4
3,100,331	-		CCNA_02940	0.34	-0.3
3,100,345	+		CCNA_02940	0.35	-0.1
3,100,474	-		CCNA_02940	0.43	+0.2
3,100,502	+		CCNA_02940	0.45	-0.1
3,100,502	+		CCNA_02940	0.45	-0.8
3,100,502	+		CCNA_02940	0.45	+0.2
3,100,509	-		CCNA_02940	0.45	-0.5
3,100,537	+		CCNA_02940	0.47	-0.9
3,100,544	-		CCNA_02940	0.47	-1.6
3,100,546	-		CCNA_02940	0.47	+0.3
3,100,546	-		CCNA_02940	0.47	+0.2
3,100,558	+		CCNA_02940	0.48	+0.2
3,100,560	+		CCNA_02940	0.48	-0.1
3,100,560	+		CCNA_02940	0.48	-0.4
3,100,560	+		CCNA_02940	0.48	+0.5
3,100,566	-		CCNA_02940	0.49	+0.3
3,100,614	+		CCNA_02940	0.52	+0.3
3,100,622	-		CCNA_02940	0.52	-0.3
3,100,642	-		CCNA_02940	0.53	-0.6
3,100,647	-		CCNA_02940	0.54	+0.3
3,100,691	+		CCNA_02940	0.57	-0.0
3,100,697	+		CCNA_02940	0.57	+0.6
3,100,697	+		CCNA_02940	0.57	-0.4
3,100,697	+		CCNA_02940	0.57	+0.6
3,100,701	+		CCNA_02940	0.57	+0.3
3,100,705	-		CCNA_02940	0.57	+0.7
3,100,851	-		CCNA_02940	0.66	+2.0
3,100,873	-		CCNA_02940	0.68	+0.4
3,100,924	-		CCNA_02940	0.71	-0.1
3,101,008	+		CCNA_02940	0.76	-0.3
3,101,009	-		CCNA_02940	0.76	-1.2
3,101,045	+		CCNA_02940	0.79	+0.2
3,101,068	+		CCNA_02940	0.80	+0.1
3,101,085	-		CCNA_02940	0.81	-0.6
3,101,089	-		CCNA_02940	0.81	+1.8
3,101,117	+		CCNA_02940	0.83	+0.5
3,101,155	+		CCNA_02940	0.85	-0.3
3,101,193	+		CCNA_02940	0.88	+0.6
3,101,193	+		CCNA_02940	0.88	+0.8
3,101,206	+		CCNA_02940	0.89	+0.3
3,101,214	+		CCNA_02940	0.89	+0.4
3,101,219	-		CCNA_02940	0.89	-0.3
3,101,231	+				-0.3
3,101,255	+				+0.5
3,101,266	+				-0.3
3,101,274	-				+0.5
3,101,274	-				-0.5
3,101,295	-				+0.2
3,101,317	-				-0.4
3,101,365	-				+0.2
3,101,383	+				-0.1
3,101,400	+				+0.5
3,101,427	+				-0.3
3,101,434	-				+0.7
3,101,761	+		CCNA_02941	0.46	-1.7
3,101,779	+		CCNA_02941	0.50	+0.5
3,102,059	+				-0.0
3,102,297	-		CCNA_02942	0.14	-1.1
3,102,301	+		CCNA_02942	0.15	-0.7
3,102,306	+		CCNA_02942	0.15	-0.9
3,102,358	+		CCNA_02942	0.19	-0.3
3,102,386	+		CCNA_02942	0.22	+0.1