Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01683

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,809,433	-				+0.6
1,809,454	+		CCNA_01682	0.11	+0.1
1,809,513	+		CCNA_01682	0.17	-0.5
1,809,513	+		CCNA_01682	0.17	+0.1
1,809,521	-		CCNA_01682	0.18	+0.2
1,809,598	-		CCNA_01682	0.26	+1.0
1,809,600	+		CCNA_01682	0.26	-0.4
1,809,650	+		CCNA_01682	0.32	+0.4
1,809,904	+		CCNA_01682	0.59	-0.7
1,809,912	-		CCNA_01682	0.59	-0.0
1,809,963	-		CCNA_01682	0.65	+0.3
1,810,085	+		CCNA_01682	0.78	+0.7
1,810,106	-		CCNA_01682	0.80	-0.8
1,810,111	-		CCNA_01682	0.81	-1.5
1,810,143	-		CCNA_01682	0.84	-0.2
1,810,186	-		CCNA_01682	0.89	-0.7
1,810,221	+				+0.2
1,810,229	-				+0.5
1,810,288	+				-0.6
1,810,296	-				+0.5
1,810,296	-				+1.1
1,810,296	-				+0.7
1,810,296	-				+0.3
1,810,385	+				-1.3
1,810,442	-		CCNA_01683	0.12	-0.3
1,810,469	+		CCNA_01683	0.15	+0.6
1,810,509	+		CCNA_01683	0.18	-0.5
1,810,517	-		CCNA_01683	0.19	-0.8
1,810,517	-		CCNA_01683	0.19	-0.1
1,810,517	-		CCNA_01683	0.19	-0.2
1,810,539	+		CCNA_01683	0.20	-0.2
1,810,619	-		CCNA_01683	0.27	-1.7
1,810,674	-		CCNA_01683	0.31	-0.5
1,810,772	+		CCNA_01683	0.39	-0.6
1,810,793	-		CCNA_01683	0.41	-0.2
1,810,793	-		CCNA_01683	0.41	-0.1
1,810,821	-		CCNA_01683	0.43	+0.2
1,810,822	-		CCNA_01683	0.43	-1.0
1,810,905	-		CCNA_01683	0.50	+0.3
1,810,959	+		CCNA_01683	0.55	+0.3
1,810,973	-		CCNA_01683	0.56	-1.7
1,811,009	+		CCNA_01683	0.59	+0.1
1,811,009	+		CCNA_01683	0.59	+0.2
1,811,009	+		CCNA_01683	0.59	-0.6
1,811,009	+		CCNA_01683	0.59	-0.3
1,811,014	+		CCNA_01683	0.59	+0.7
1,811,017	-		CCNA_01683	0.59	+1.2
1,811,017	-		CCNA_01683	0.59	-0.4
1,811,017	-		CCNA_01683	0.59	+0.9
1,811,017	-		CCNA_01683	0.59	-0.4
1,811,017	-		CCNA_01683	0.59	+0.4
1,811,017	-		CCNA_01683	0.59	-0.4
1,811,017	-		CCNA_01683	0.59	-0.3
1,811,019	+		CCNA_01683	0.60	-0.1
1,811,019	+		CCNA_01683	0.60	+0.3
1,811,033	-		CCNA_01683	0.61	-0.5
1,811,042	-		CCNA_01683	0.62	-0.1
1,811,058	+		CCNA_01683	0.63	-0.5
1,811,107	+		CCNA_01683	0.67	-0.8
1,811,188	+		CCNA_01683	0.73	+1.7
1,811,196	-		CCNA_01683	0.74	-1.9
1,811,218	-		CCNA_01683	0.76	+0.3
1,811,220	-		CCNA_01683	0.76	-0.3
1,811,247	+		CCNA_01683	0.78	-0.4
1,811,256	-		CCNA_01683	0.79	-1.8
1,811,260	-		CCNA_01683	0.79	+0.4
1,811,265	-		CCNA_01683	0.80	+0.6
1,811,289	+		CCNA_01683	0.82	+0.8
1,811,289	+		CCNA_01683	0.82	+0.7
1,811,297	-		CCNA_01683	0.82	+1.2
1,811,435	-				+2.4
1,811,464	+				+0.2
1,811,492	-				+0.1
1,811,514	-				+1.2
1,811,625	-		CCNA_01684	0.18	+0.8
1,811,631	+		CCNA_01684	0.19	+0.5
1,811,632	+		CCNA_01684	0.19	-1.2
1,811,639	-		CCNA_01684	0.20	+0.1
1,811,653	+		CCNA_01684	0.21	-1.4
1,811,661	-		CCNA_01684	0.22	+0.6
1,811,661	-		CCNA_01684	0.22	+0.6
1,811,685	-		CCNA_01684	0.25	+0.5
1,811,708	+		CCNA_01684	0.27	-0.9
1,811,823	+		CCNA_01684	0.40	-1.7
1,811,831	-		CCNA_01684	0.41	+0.3
1,811,839	-		CCNA_01684	0.42	+0.8
1,811,869	+		CCNA_01684	0.46	-0.7
1,811,904	+		CCNA_01684	0.49	-0.7
1,811,907	-		CCNA_01684	0.50	+1.5
1,811,952	+		CCNA_01684	0.55	-0.8
1,811,958	-		CCNA_01684	0.56	+0.2
1,811,960	-		CCNA_01684	0.56	+0.1
1,812,004	-		CCNA_01684	0.61	+0.2
1,812,141	+		CCNA_01684	0.76	-1.5
1,812,164	+		CCNA_01684	0.79	+0.3
1,812,172	-		CCNA_01684	0.80	-0.0
1,812,172	-		CCNA_01684	0.80	+0.4
1,812,244	+		CCNA_01684	0.88	-1.4
1,812,247	-		CCNA_01684	0.88	+0.4
1,812,247	-		CCNA_01684	0.88	+0.2
1,812,251	+		CCNA_01684	0.89	-1.7
1,812,266	+				-2.6
1,812,335	+				-1.2
1,812,335	+				+0.0
1,812,335	+				+0.2
1,812,338	-				-0.4
1,812,343	-				-1.0
1,812,343	-				+1.1
1,812,353	-				+0.6
1,812,364	+				+0.3
1,812,364	+				-0.3
1,812,423	+				-0.1
1,812,446	+				-1.4