Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01469

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,576,140	+		CCNA_01467	0.87	-1.8
1,576,148	-		CCNA_01467	0.87	-0.9
1,576,154	+		CCNA_01467	0.88	-1.6
1,576,156	+		CCNA_01467	0.88	-3.0
1,576,179	+		CCNA_01467	0.89	-1.0
1,576,206	+				+0.6
1,576,207	-				-1.6
1,576,253	+				-0.6
1,576,352	+				+0.0
1,576,369	-				+0.6
1,576,433	-				-2.3
1,576,438	-				-3.5
1,576,469	+		CCNA_01468	0.14	-0.6
1,576,482	-		CCNA_01468	0.15	+1.2
1,576,501	+		CCNA_01468	0.18	-0.2
1,576,501	+		CCNA_01468	0.18	-0.5
1,576,501	+		CCNA_01468	0.18	-0.2
1,576,502	+		CCNA_01468	0.18	+0.5
1,576,518	+		CCNA_01468	0.20	-0.4
1,576,534	-		CCNA_01468	0.22	-0.1
1,576,535	-		CCNA_01468	0.23	-0.6
1,576,636	-		CCNA_01468	0.36	-3.3
1,576,643	+		CCNA_01468	0.37	+0.3
1,576,651	-		CCNA_01468	0.38	+0.0
1,576,685	-		CCNA_01468	0.43	-0.6
1,576,687	+		CCNA_01468	0.43	-0.3
1,576,691	+		CCNA_01468	0.44	-0.5
1,576,691	+		CCNA_01468	0.44	-0.6
1,576,695	-		CCNA_01468	0.44	-1.5
1,576,700	-		CCNA_01468	0.45	-1.6
1,576,700	-		CCNA_01468	0.45	-0.9
1,576,700	-		CCNA_01468	0.45	-0.8
1,576,753	-		CCNA_01468	0.52	-1.3
1,576,759	+		CCNA_01468	0.53	+0.1
1,576,767	-		CCNA_01468	0.54	-1.2
1,576,790	+		CCNA_01468	0.57	-0.1
1,576,809	+		CCNA_01468	0.59	-0.8
1,576,849	+		CCNA_01468	0.65	+1.2
1,576,870	+		CCNA_01468	0.68	-0.3
1,576,881	-		CCNA_01468	0.69	+2.4
1,576,896	-		CCNA_01468	0.71	+0.5
1,576,938	-		CCNA_01468	0.77	+0.2
1,577,028	-		CCNA_01468	0.89	-0.2
1,577,038	-				-1.1
1,577,048	-				-0.4
1,577,053	+				-0.3
1,577,126	-		CCNA_01469	0.11	-0.6
1,577,149	-		CCNA_01469	0.25	-1.8
1,577,159	-		CCNA_01469	0.31	-1.6
1,577,159	-		CCNA_01469	0.31	+0.2
1,577,160	+		CCNA_01469	0.32	-0.5
1,577,168	-		CCNA_01469	0.36	+0.1
1,577,170	+		CCNA_01469	0.38	-0.3
1,577,175	+		CCNA_01469	0.40	-0.9
1,577,178	-		CCNA_01469	0.42	-0.6
1,577,195	+		CCNA_01469	0.52	+0.1
1,577,248	+		CCNA_01469	0.84	-0.1
1,577,256	-		CCNA_01469	0.89	-2.0
1,577,297	+				-2.0
1,577,368	-		CCNA_01470	0.11	+0.2
1,577,410	+		CCNA_01470	0.16	-0.4
1,577,428	-		CCNA_01470	0.18	-0.1
1,577,442	-		CCNA_01470	0.19	-0.4
1,577,461	-		CCNA_01470	0.22	+0.6
1,577,473	+		CCNA_01470	0.23	-0.3
1,577,473	+		CCNA_01470	0.23	-1.0
1,577,481	-		CCNA_01470	0.24	-1.8
1,577,491	-		CCNA_01470	0.25	+0.2
1,577,491	-		CCNA_01470	0.25	+0.4
1,577,494	+		CCNA_01470	0.25	+0.2
1,577,508	-		CCNA_01470	0.27	-1.1
1,577,509	-		CCNA_01470	0.27	+1.1
1,577,533	-		CCNA_01470	0.30	+0.1
1,577,544	-		CCNA_01470	0.31	+0.6
1,577,544	-		CCNA_01470	0.31	-0.4
1,577,544	-		CCNA_01470	0.31	-2.7
1,577,549	-		CCNA_01470	0.32	+0.1
1,577,557	+		CCNA_01470	0.33	+0.1
1,577,557	+		CCNA_01470	0.33	-0.0
1,577,565	-		CCNA_01470	0.34	+1.0
1,577,565	-		CCNA_01470	0.34	-0.3
1,577,585	+		CCNA_01470	0.36	-0.8
1,577,586	+		CCNA_01470	0.36	-0.7
1,577,596	+		CCNA_01470	0.37	+0.3
1,577,650	-		CCNA_01470	0.43	+1.0
1,577,674	-		CCNA_01470	0.46	-0.2
1,577,674	-		CCNA_01470	0.46	-1.6
1,577,674	-		CCNA_01470	0.46	-0.2
1,577,677	+		CCNA_01470	0.46	+0.6
1,577,682	+		CCNA_01470	0.47	+0.1
1,577,685	-		CCNA_01470	0.47	-0.1
1,577,726	+		CCNA_01470	0.52	+0.2
1,577,740	-		CCNA_01470	0.54	-2.0
1,577,756	+		CCNA_01470	0.56	+0.1
1,577,801	-		CCNA_01470	0.61	-0.4
1,577,813	+		CCNA_01470	0.62	-1.1
1,577,813	+		CCNA_01470	0.62	-1.5
1,577,813	+		CCNA_01470	0.62	-1.4
1,577,818	+		CCNA_01470	0.63	+0.0
1,577,818	+		CCNA_01470	0.63	-0.2
1,577,818	+		CCNA_01470	0.63	-0.9
1,577,821	-		CCNA_01470	0.63	+0.6
1,577,821	-		CCNA_01470	0.63	-0.8
1,577,821	-		CCNA_01470	0.63	-1.0
1,577,851	+		CCNA_01470	0.67	-0.9
1,577,853	-		CCNA_01470	0.67	-1.5
1,577,971	+		CCNA_01470	0.80	-0.4
1,578,007	-		CCNA_01470	0.85	+1.6
1,578,007	-		CCNA_01470	0.85	+0.2
1,578,049	-		CCNA_01470	0.89	+0.6
1,578,053	+		CCNA_01470	0.90	+0.2
1,578,083	-				+0.2
1,578,085	-				-1.0
1,578,085	-				+2.6
1,578,108	+				-1.0
1,578,150	-				-0.4
1,578,163	-				-0.7
1,578,196	+				+0.7
1,578,211	+				+0.8
1,578,211	+				-0.8
1,578,217	+				+0.1
1,578,229	+				-0.0
1,578,235	+				+0.4
1,578,237	-				-0.1
1,578,237	-				-0.4
1,578,244	+				+0.4
1,578,252	-				-0.3
1,578,267	+				+0.5