Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01375

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,489,283	+		CCNA_01374	0.54	-0.1
1,489,365	-		CCNA_01374	0.58	-0.1
1,489,365	-		CCNA_01374	0.58	-1.7
1,489,365	-		CCNA_01374	0.58	-1.7
1,489,405	+		CCNA_01374	0.60	-0.2
1,489,412	-		CCNA_01374	0.60	-0.4
1,489,413	-		CCNA_01374	0.60	+1.6
1,489,426	-		CCNA_01374	0.61	-0.1
1,489,431	-		CCNA_01374	0.61	+0.2
1,489,436	-		CCNA_01374	0.62	-0.3
1,489,436	-		CCNA_01374	0.62	-1.5
1,489,491	+		CCNA_01374	0.64	+0.5
1,489,492	-		CCNA_01374	0.64	-0.5
1,489,509	-		CCNA_01374	0.65	+0.3
1,489,524	+		CCNA_01374	0.66	+0.2
1,489,530	+		CCNA_01374	0.66	-0.1
1,489,549	+		CCNA_01374	0.67	-1.0
1,489,560	+		CCNA_01374	0.68	-0.5
1,489,560	+		CCNA_01374	0.68	+0.4
1,489,568	-		CCNA_01374	0.68	+0.0
1,489,600	+		CCNA_01374	0.70	-0.2
1,489,613	-		CCNA_01374	0.71	-1.9
1,489,615	+		CCNA_01374	0.71	+1.2
1,489,630	+		CCNA_01374	0.72	+0.9
1,489,630	+		CCNA_01374	0.72	-1.3
1,489,630	+		CCNA_01374	0.72	+0.6
1,489,630	+		CCNA_01374	0.72	+0.0
1,489,630	+		CCNA_01374	0.72	+1.6
1,489,630	+		CCNA_01374	0.72	-0.2
1,489,630	+		CCNA_01374	0.72	+0.6
1,489,630	+		CCNA_01374	0.72	+0.4
1,489,635	+		CCNA_01374	0.72	-0.0
1,489,638	-		CCNA_01374	0.72	-0.6
1,489,638	-		CCNA_01374	0.72	-0.8
1,489,638	-		CCNA_01374	0.72	-0.2
1,489,652	-		CCNA_01374	0.73	-0.2
1,489,686	-		CCNA_01374	0.75	+1.8
1,489,711	-		CCNA_01374	0.76	-1.4
1,489,711	-		CCNA_01374	0.76	+0.8
1,489,742	+		CCNA_01374	0.77	+0.5
1,489,751	+		CCNA_01374	0.78	+0.1
1,489,771	-		CCNA_01374	0.79	-0.2
1,489,772	-		CCNA_01374	0.79	-2.0
1,489,793	+		CCNA_01374	0.80	+0.4
1,489,844	-		CCNA_01374	0.83	-0.4
1,489,865	-		CCNA_01374	0.84	-0.8
1,489,980	+		CCNA_01374	0.90	+0.9
1,490,107	-				-0.9
1,490,138	+				+0.3
1,490,143	+				-1.1
1,490,172	+				+2.2
1,490,172	+				+0.3
1,490,172	+				+0.0
1,490,179	-				-1.0
1,490,179	-				-0.4
1,490,180	-				-0.4
1,490,180	-				-0.2
1,490,198	+				+0.4
1,490,206	-				-1.0
1,490,249	+				+0.1
1,490,373	+		CCNA_01375	0.31	+1.6
1,490,426	+		CCNA_01375	0.43	+2.0
1,490,480	+		CCNA_01375	0.55	+1.0
1,490,586	+		CCNA_01375	0.79	-0.5
1,490,688	-				-0.2
1,490,701	+				-0.0
1,490,721	-				-1.3
1,490,782	-				-2.0
1,490,813	+				+0.3
1,490,821	-				-0.6
1,490,857	-				+0.1
1,490,860	+				-0.5
1,490,880	+				+0.0
1,490,885	+				+0.6
1,490,885	+				+0.1
1,490,888	-				-0.3
1,490,893	+				+0.5
1,490,926	-		CCNA_01376	0.10	-0.1
1,490,926	-		CCNA_01376	0.10	+0.4
1,490,962	+		CCNA_01376	0.15	-1.3
1,490,962	+		CCNA_01376	0.15	+0.0
1,490,964	-		CCNA_01376	0.16	-0.9
1,490,966	+		CCNA_01376	0.16	+0.3
1,490,984	-		CCNA_01376	0.19	-1.8
1,490,989	-		CCNA_01376	0.19	-0.8
1,491,007	-		CCNA_01376	0.22	+0.6
1,491,014	+		CCNA_01376	0.23	+0.4
1,491,033	+		CCNA_01376	0.26	-1.6
1,491,113	+		CCNA_01376	0.37	-0.8
1,491,113	+		CCNA_01376	0.37	+0.3
1,491,121	-		CCNA_01376	0.38	+0.6
1,491,121	-		CCNA_01376	0.38	-2.2
1,491,169	-		CCNA_01376	0.45	-0.2
1,491,187	+		CCNA_01376	0.47	+0.7
1,491,207	-		CCNA_01376	0.50	+0.0
1,491,232	+		CCNA_01376	0.54	-0.2
1,491,320	+		CCNA_01376	0.66	+0.5
1,491,328	-		CCNA_01376	0.67	-0.7
1,491,364	+		CCNA_01376	0.72	+0.9
1,491,383	+		CCNA_01376	0.75	-0.0
1,491,391	-		CCNA_01376	0.76	-0.6
1,491,391	-		CCNA_01376	0.76	-0.0
1,491,391	-		CCNA_01376	0.76	+0.4
1,491,391	-		CCNA_01376	0.76	+0.0
1,491,392	-		CCNA_01376	0.76	+0.4
1,491,420	+		CCNA_01376	0.80	-0.0
1,491,428	-		CCNA_01376	0.82	-0.0
1,491,494	+				+0.3
1,491,522	+				+1.0
1,491,530	-				-2.0
1,491,536	+				+0.4
1,491,556	+				+0.4
1,491,581	-				-1.4