Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01215

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,341,087	+		CCNA_01214	0.25	+0.5
1,341,721	-		CCNA_01214	0.77	-3.1
1,341,782	+		CCNA_01214	0.82	-0.8
1,341,782	+		CCNA_01214	0.82	-2.7
1,341,790	-		CCNA_01214	0.83	-0.9
1,341,790	-		CCNA_01214	0.83	-1.9
1,341,991	-				-1.2
1,342,075	+		CCNA_01215	0.18	-2.3
1,342,083	-		CCNA_01215	0.20	+2.5
1,342,132	+		CCNA_01215	0.31	+1.5
1,342,140	-		CCNA_01215	0.33	-1.0
1,342,140	-		CCNA_01215	0.33	-2.1
1,342,142	+		CCNA_01215	0.34	+0.2
1,342,150	-		CCNA_01215	0.35	-1.2
1,342,202	-		CCNA_01215	0.47	+0.2
1,342,239	+		CCNA_01215	0.56	+0.5
1,342,239	+		CCNA_01215	0.56	+0.4
1,342,261	+		CCNA_01215	0.61	-0.3
1,342,264	-		CCNA_01215	0.61	+0.0
1,342,303	-		CCNA_01215	0.70	+0.6
1,342,316	-		CCNA_01215	0.73	+0.5
1,342,342	+		CCNA_01215	0.79	-2.0
1,342,353	-		CCNA_01215	0.82	+1.0
1,342,355	+		CCNA_01215	0.82	-0.5
1,342,355	+		CCNA_01215	0.82	-0.0
1,342,363	-		CCNA_01215	0.84	-0.4
1,342,363	-		CCNA_01215	0.84	+0.2
1,342,368	-		CCNA_01215	0.85	+0.3
1,342,375	-		CCNA_01215	0.87	+0.1
1,342,377	+		CCNA_01215	0.87	+0.7
1,342,385	-		CCNA_01215	0.89	-1.0
1,342,387	+		CCNA_01215	0.89	-2.9
1,342,387	+		CCNA_01215	0.89	-1.5
1,342,395	-				-0.3
1,342,395	-				+1.1
1,342,395	-				+0.7
1,342,395	-				+0.8
1,342,406	-				+0.4
1,342,409	+				+0.2
1,342,417	-				+1.1
1,342,427	+				-1.0
1,342,451	+				-1.4
1,342,454	-				-1.3
1,342,454	-				+0.5
1,342,463	-				+0.2
1,342,491	+				-0.5
1,342,553	-				+0.3
1,342,558	+				-0.1
1,342,566	-				+0.4
1,342,588	+				+0.4
1,342,706	+		CCNA_01216	0.18	-1.9
1,342,738	-		CCNA_01216	0.22	-0.9
1,342,743	-		CCNA_01216	0.22	-0.7
1,342,743	-		CCNA_01216	0.22	-0.5
1,342,743	-		CCNA_01216	0.22	-0.4
1,342,766	-		CCNA_01216	0.25	-0.1
1,342,766	-		CCNA_01216	0.25	+0.9
1,342,781	+		CCNA_01216	0.26	-0.9
1,342,783	+		CCNA_01216	0.27	+0.7
1,342,789	-		CCNA_01216	0.27	-0.8
1,342,791	+		CCNA_01216	0.28	-1.5
1,342,797	-		CCNA_01216	0.28	-0.9
1,342,818	-		CCNA_01216	0.31	-1.8
1,342,826	+		CCNA_01216	0.31	-0.6
1,342,869	+		CCNA_01216	0.36	+0.2
1,342,877	-		CCNA_01216	0.37	-0.3
1,342,877	-		CCNA_01216	0.37	-0.0
1,342,877	-		CCNA_01216	0.37	-0.1
1,342,901	+		CCNA_01216	0.40	+0.0
1,342,901	+		CCNA_01216	0.40	-0.0
1,342,928	+		CCNA_01216	0.42	-0.5
1,342,928	+		CCNA_01216	0.42	-0.5
1,342,938	+		CCNA_01216	0.44	-1.5
1,342,946	-		CCNA_01216	0.44	+0.2
1,342,948	-		CCNA_01216	0.45	-0.0
1,342,948	-		CCNA_01216	0.45	-1.1
1,342,953	+		CCNA_01216	0.45	+0.2
1,342,961	-		CCNA_01216	0.46	-0.2
1,342,973	+		CCNA_01216	0.47	-0.4
1,342,994	+		CCNA_01216	0.50	-1.0
1,343,027	-		CCNA_01216	0.53	+0.4
1,343,041	+		CCNA_01216	0.55	-0.4
1,343,041	+		CCNA_01216	0.55	-0.9
1,343,041	+		CCNA_01216	0.55	-1.1
1,343,049	-		CCNA_01216	0.56	-0.8
1,343,062	-		CCNA_01216	0.57	-0.7
1,343,089	+		CCNA_01216	0.60	-0.8
1,343,138	+		CCNA_01216	0.65	-0.5
1,343,138	+		CCNA_01216	0.65	-1.3
1,343,141	-		CCNA_01216	0.66	-0.6
1,343,155	+		CCNA_01216	0.67	-0.6
1,343,199	+		CCNA_01216	0.72	-0.6
1,343,253	+		CCNA_01216	0.78	-0.7
1,343,290	+		CCNA_01216	0.82	-1.0
1,343,319	+		CCNA_01216	0.85	+0.5
1,343,321	+		CCNA_01216	0.85	-0.5
1,343,321	+		CCNA_01216	0.85	-0.4
1,343,321	+		CCNA_01216	0.85	+0.6
1,343,321	-		CCNA_01216	0.85	+0.1
1,343,328	+		CCNA_01216	0.86	-1.4
1,343,329	-		CCNA_01216	0.86	+1.0
1,343,329	-		CCNA_01216	0.86	-0.4
1,343,389	+				-1.1
1,343,397	-				-0.0
1,343,397	-				-1.8