Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01154

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,256,937	-		CCNA_01153	0.31	-0.6
1,256,949	+		CCNA_01153	0.32	-0.2
1,257,019	-		CCNA_01153	0.38	-0.6
1,257,085	+		CCNA_01153	0.43	+0.1
1,257,098	+		CCNA_01153	0.44	+0.7
1,257,111	-		CCNA_01153	0.45	+0.6
1,257,111	-		CCNA_01153	0.45	-0.9
1,257,111	-		CCNA_01153	0.45	+0.6
1,257,128	+		CCNA_01153	0.46	+0.8
1,257,128	+		CCNA_01153	0.46	+0.7
1,257,128	+		CCNA_01153	0.46	-0.6
1,257,128	+		CCNA_01153	0.46	-1.1
1,257,128	+		CCNA_01153	0.46	-0.7
1,257,128	+		CCNA_01153	0.46	-0.4
1,257,128	+		CCNA_01153	0.46	+1.0
1,257,136	-		CCNA_01153	0.47	-0.1
1,257,136	-		CCNA_01153	0.47	-0.4
1,257,136	-		CCNA_01153	0.47	+0.4
1,257,164	+		CCNA_01153	0.49	+0.4
1,257,169	+		CCNA_01153	0.49	+0.8
1,257,172	-		CCNA_01153	0.50	-0.1
1,257,189	+		CCNA_01153	0.51	+0.5
1,257,194	+		CCNA_01153	0.51	+0.6
1,257,194	+		CCNA_01153	0.51	-0.0
1,257,194	+		CCNA_01153	0.51	+1.1
1,257,197	-		CCNA_01153	0.52	-1.6
1,257,199	+		CCNA_01153	0.52	+1.1
1,257,199	+		CCNA_01153	0.52	+1.0
1,257,202	-		CCNA_01153	0.52	-0.1
1,257,204	+		CCNA_01153	0.52	+0.7
1,257,207	-		CCNA_01153	0.52	+0.0
1,257,207	-		CCNA_01153	0.52	-0.9
1,257,209	+		CCNA_01153	0.52	+0.7
1,257,265	+		CCNA_01153	0.57	+0.2
1,257,270	+		CCNA_01153	0.57	+0.4
1,257,273	-		CCNA_01153	0.57	+1.0
1,257,290	+		CCNA_01153	0.59	+0.2
1,257,296	+		CCNA_01153	0.59	+0.3
1,257,320	-		CCNA_01153	0.61	+0.3
1,257,327	+		CCNA_01153	0.62	+0.6
1,257,327	+		CCNA_01153	0.62	+0.7
1,257,327	+		CCNA_01153	0.62	+0.4
1,257,327	+		CCNA_01153	0.62	+0.4
1,257,327	+		CCNA_01153	0.62	-0.3
1,257,327	+		CCNA_01153	0.62	-0.2
1,257,327	+		CCNA_01153	0.62	-0.0
1,257,327	+		CCNA_01153	0.62	-0.0
1,257,327	+		CCNA_01153	0.62	+0.0
1,257,331	+		CCNA_01153	0.62	-0.3
1,257,335	-		CCNA_01153	0.62	-0.0
1,257,335	-		CCNA_01153	0.62	-1.0
1,257,335	-		CCNA_01153	0.62	-2.5
1,257,335	-		CCNA_01153	0.62	+0.2
1,257,335	-		CCNA_01153	0.62	-0.3
1,257,337	+		CCNA_01153	0.62	-0.2
1,257,345	-		CCNA_01153	0.63	+0.0
1,257,362	+		CCNA_01153	0.64	+0.1
1,257,397	+		CCNA_01153	0.67	-0.6
1,257,397	+		CCNA_01153	0.67	+0.5
1,257,420	+		CCNA_01153	0.69	-1.4
1,257,420	-		CCNA_01153	0.69	+0.8
1,257,553	+		CCNA_01153	0.79	-0.7
1,257,553	+		CCNA_01153	0.79	+0.8
1,257,692	-				+0.3
1,257,728	-				-1.1
1,257,757	+				-0.8
1,257,885	+				+0.3
1,257,993	-		CCNA_01154	0.13	+0.6
1,258,034	+		CCNA_01154	0.19	+0.2
1,258,034	+		CCNA_01154	0.19	-1.3
1,258,037	+		CCNA_01154	0.20	+0.4
1,258,112	-		CCNA_01154	0.30	-1.4
1,258,126	+		CCNA_01154	0.32	+0.4
1,258,134	-		CCNA_01154	0.34	-1.1
1,258,134	-		CCNA_01154	0.34	-0.9
1,258,138	+		CCNA_01154	0.34	+0.2
1,258,146	-		CCNA_01154	0.35	-1.9
1,258,146	-		CCNA_01154	0.35	-2.0
1,258,157	-		CCNA_01154	0.37	-0.3
1,258,181	-		CCNA_01154	0.40	+0.2
1,258,182	-		CCNA_01154	0.41	+0.1
1,258,235	-		CCNA_01154	0.48	+0.6
1,258,239	+		CCNA_01154	0.49	-0.4
1,258,309	+		CCNA_01154	0.59	-0.4
1,258,317	-		CCNA_01154	0.60	-0.4
1,258,321	+		CCNA_01154	0.61	+0.6
1,258,363	+		CCNA_01154	0.67	+0.4
1,258,405	+		CCNA_01154	0.73	-0.2
1,258,458	+		CCNA_01154	0.81	-0.0
1,258,485	-		CCNA_01154	0.84	+0.0
1,258,495	+		CCNA_01154	0.86	+0.5
1,258,518	+		CCNA_01154	0.89	-0.4
1,258,518	+		CCNA_01154	0.89	+0.1
1,258,548	+				-0.8
1,258,558	+				+0.3
1,258,558	+				+0.1
1,258,559	+				+1.0
1,258,594	-				-0.7
1,258,594	-				-0.1
1,258,607	-				+0.0
1,258,610	+				+0.1
1,258,610	+				-0.0
1,258,618	-				-2.3
1,258,669	+				+0.3
1,258,688	-				-0.2
1,258,878	+				+0.2
1,258,898	+				-0.5
1,258,930	-				+0.7
1,258,950	-				-0.5
1,258,962	-				+0.1
1,258,962	-				-0.0
1,259,001	-				-0.4
1,259,023	+				+1.2
1,259,044	-				+2.2
1,259,094	+				+0.3
1,259,094	+				+1.3
1,259,107	-				-0.0
1,259,136	+				+0.4
1,259,200	-		CCNA_01155	0.11	+0.1
1,259,200	-		CCNA_01155	0.11	-1.0
1,259,236	-		CCNA_01155	0.12	+0.6
1,259,265	+		CCNA_01155	0.13	+0.2
1,259,278	-		CCNA_01155	0.14	-0.0
1,259,278	-		CCNA_01155	0.14	-0.3
1,259,294	+		CCNA_01155	0.14	+0.1
1,259,300	+		CCNA_01155	0.14	+0.6
1,259,302	-		CCNA_01155	0.14	-0.1
1,259,302	-		CCNA_01155	0.14	-1.5
1,259,371	+		CCNA_01155	0.17	+0.8
1,259,379	+		CCNA_01155	0.17	-0.5
1,259,440	+		CCNA_01155	0.19	+0.5
1,259,447	+		CCNA_01155	0.19	-1.6
1,259,450	+		CCNA_01155	0.20	+0.4
1,259,514	-		CCNA_01155	0.22	-0.1
1,259,522	-		CCNA_01155	0.22	+0.7
1,259,540	+		CCNA_01155	0.23	+1.3
1,259,577	-		CCNA_01155	0.24	-0.2