Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_01004

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,084,311	-		CCNA_01002	0.44	-0.0
1,084,412	-		CCNA_01002	0.56	-1.2
1,084,454	-		CCNA_01002	0.62	+0.2
1,084,494	+		CCNA_01002	0.67	+0.2
1,084,563	-		CCNA_01002	0.75	-0.3
1,084,567	+		CCNA_01002	0.76	-0.8
1,084,597	+		CCNA_01002	0.79	+0.2
1,084,623	-		CCNA_01002	0.83	+1.3
1,084,635	-		CCNA_01002	0.84	+0.2
1,084,650	-		CCNA_01002	0.86	+0.0
1,084,716	-				-3.0
1,084,791	-				+0.5
1,084,842	-		CCNA_01003	0.25	-0.5
1,084,844	-		CCNA_01003	0.26	+0.7
1,084,844	-		CCNA_01003	0.26	-0.1
1,084,844	-		CCNA_01003	0.26	+1.3
1,084,913	+		CCNA_01003	0.47	+0.5
1,084,913	+		CCNA_01003	0.47	-0.8
1,084,922	-		CCNA_01003	0.50	-1.6
1,084,937	+		CCNA_01003	0.55	-0.1
1,084,938	-		CCNA_01003	0.55	-0.8
1,084,945	-		CCNA_01003	0.57	-0.1
1,084,945	-		CCNA_01003	0.57	-1.0
1,084,945	-		CCNA_01003	0.57	-1.1
1,084,945	-		CCNA_01003	0.57	-1.0
1,084,945	-		CCNA_01003	0.57	-1.0
1,084,945	-		CCNA_01003	0.57	+0.2
1,084,950	+		CCNA_01003	0.59	-0.8
1,084,958	-		CCNA_01003	0.61	-2.4
1,085,031	-		CCNA_01003	0.84	-0.8
1,085,033	+		CCNA_01003	0.85	-0.1
1,085,034	+		CCNA_01003	0.85	+0.2
1,085,035	-		CCNA_01003	0.85	-0.3
1,085,036	-		CCNA_01003	0.86	-0.8
1,085,104	+				-0.7
1,085,117	-				-0.1
1,085,117	-				+1.3
1,085,117	-				-0.8
1,085,117	-				+0.2
1,085,135	-				+0.6
1,085,148	-				+0.4
1,085,179	+				+0.5
1,085,199	+				+0.8
1,085,199	+				+0.2
1,085,229	+				+0.7
1,085,283	-		CCNA_01004	0.20	-1.2
1,085,291	+		CCNA_01004	0.21	+0.2
1,085,328	-		CCNA_01004	0.30	+0.2
1,085,357	-		CCNA_01004	0.36	-0.4
1,085,444	-		CCNA_01004	0.56	-0.2
1,085,499	+		CCNA_01004	0.68	+0.3
1,085,512	+		CCNA_01004	0.71	+0.6
1,085,581	+		CCNA_01004	0.87	+0.8
1,085,609	+				+0.2
1,085,609	+				-0.0
1,085,609	+				-0.4
1,085,609	-				-1.6
1,085,617	-				-0.3
1,085,617	-				+0.2
1,085,628	+				+1.4
1,085,628	+				+0.9
1,085,643	+				+0.2
1,085,675	-				-0.6
1,085,740	-		CCNA_01005	0.21	-1.0
1,085,740	-		CCNA_01005	0.21	-0.4
1,085,747	-		CCNA_01005	0.23	+0.7
1,085,813	+		CCNA_01005	0.38	+0.5
1,085,829	+		CCNA_01005	0.42	+0.5
1,085,829	+		CCNA_01005	0.42	+0.4
1,085,837	-		CCNA_01005	0.44	+0.7
1,085,882	+		CCNA_01005	0.55	+0.9
1,085,890	-		CCNA_01005	0.57	+1.0
1,085,892	+		CCNA_01005	0.57	-0.3
1,085,892	+		CCNA_01005	0.57	+0.2
1,085,927	+		CCNA_01005	0.65	+0.2
1,085,927	+		CCNA_01005	0.65	+0.9
1,085,927	+		CCNA_01005	0.65	+0.6
1,085,929	-		CCNA_01005	0.66	+0.2
1,085,932	+		CCNA_01005	0.67	-0.2
1,085,932	+		CCNA_01005	0.67	+0.6
1,085,932	+		CCNA_01005	0.67	+0.5
1,085,935	-		CCNA_01005	0.67	+0.2
1,085,935	-		CCNA_01005	0.67	+0.6
1,085,935	-		CCNA_01005	0.67	+0.5
1,085,940	-		CCNA_01005	0.69	-0.6
1,085,942	+		CCNA_01005	0.69	+0.7
1,085,942	+		CCNA_01005	0.69	+0.5
1,085,948	+		CCNA_01005	0.70	+1.0
1,085,948	+		CCNA_01005	0.70	+0.4
1,085,950	-		CCNA_01005	0.71	-0.3
1,085,954	+		CCNA_01005	0.72	+0.8
1,085,956	-		CCNA_01005	0.72	-0.4
1,085,974	+		CCNA_01005	0.77	+0.5
1,085,975	+		CCNA_01005	0.77	+0.5
1,086,016	-		CCNA_01005	0.87	-0.1
1,086,034	+				+0.5
1,086,041	+				+0.4
1,086,044	-				-1.2
1,086,049	-				+0.7
1,086,079	+				-0.1
1,086,079	+				+0.4
1,086,079	+				+0.5
1,086,085	-				-1.0
1,086,087	-				-0.0
1,086,087	-				-0.7
1,086,103	+				-0.1
1,086,108	+				+0.0
1,086,109	+				+0.1
1,086,116	-		CCNA_01006	0.11	-0.2
1,086,163	+		CCNA_01006	0.26	+0.1
1,086,163	+		CCNA_01006	0.26	+0.3
1,086,169	-		CCNA_01006	0.28	+0.6
1,086,171	-		CCNA_01006	0.29	+0.7
1,086,175	+		CCNA_01006	0.30	-1.4
1,086,228	+		CCNA_01006	0.47	+0.2
1,086,233	-		CCNA_01006	0.48	+0.0
1,086,277	+		CCNA_01006	0.62	-1.7
1,086,295	+		CCNA_01006	0.68	+1.1
1,086,318	-		CCNA_01006	0.76	-0.7
1,086,512	+				-0.6
1,086,544	-		CCNA_01007	0.29	+0.4
1,086,544	-		CCNA_01007	0.29	-0.2
1,086,544	-		CCNA_01007	0.29	-0.6
1,086,558	-		CCNA_01007	0.37	+0.6
1,086,594	+		CCNA_01007	0.58	-0.1