Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00998

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,080,379	+		CCNA_00997	0.38	+0.1
1,080,379	+		CCNA_00997	0.38	+0.7
1,080,379	+		CCNA_00997	0.38	+0.6
1,080,387	-		CCNA_00997	0.39	+0.4
1,080,432	+		CCNA_00997	0.42	-0.1
1,080,437	+		CCNA_00997	0.43	+2.2
1,080,457	+		CCNA_00997	0.44	-0.4
1,080,462	+		CCNA_00997	0.45	+0.3
1,080,491	+		CCNA_00997	0.47	-0.7
1,080,585	+		CCNA_00997	0.55	+1.2
1,080,595	+		CCNA_00997	0.56	-1.1
1,080,595	+		CCNA_00997	0.56	+0.7
1,080,602	+		CCNA_00997	0.56	+1.3
1,080,612	+		CCNA_00997	0.57	-0.1
1,080,628	+		CCNA_00997	0.58	+1.1
1,080,635	+		CCNA_00997	0.59	+0.2
1,080,635	+		CCNA_00997	0.59	-1.3
1,080,643	-		CCNA_00997	0.59	-2.1
1,080,643	-		CCNA_00997	0.59	-0.8
1,080,643	-		CCNA_00997	0.59	-0.3
1,080,643	-		CCNA_00997	0.59	+0.2
1,080,687	-		CCNA_00997	0.63	-2.9
1,080,727	+		CCNA_00997	0.66	+0.4
1,080,730	-		CCNA_00997	0.67	-0.7
1,080,759	+		CCNA_00997	0.69	-0.2
1,080,776	-		CCNA_00997	0.70	-0.1
1,080,782	-		CCNA_00997	0.71	-0.6
1,080,807	-		CCNA_00997	0.73	+0.2
1,080,808	-		CCNA_00997	0.73	-1.1
1,080,824	+		CCNA_00997	0.74	+0.2
1,080,828	+		CCNA_00997	0.75	-0.7
1,080,831	-		CCNA_00997	0.75	-0.7
1,080,832	-		CCNA_00997	0.75	-1.4
1,080,838	+		CCNA_00997	0.75	+0.6
1,080,859	-		CCNA_00997	0.77	-0.6
1,080,859	-		CCNA_00997	0.77	-1.0
1,080,859	-		CCNA_00997	0.77	-0.5
1,080,929	-		CCNA_00997	0.83	+0.2
1,080,936	-		CCNA_00997	0.83	-0.8
1,080,947	-		CCNA_00997	0.84	-1.5
1,080,961	-		CCNA_00997	0.85	+0.9
1,080,989	+		CCNA_00997	0.88	-0.1
1,080,989	+		CCNA_00997	0.88	+0.1
1,081,007	-		CCNA_00997	0.89	-2.0
1,081,010	+		CCNA_00997	0.89	+0.4
1,081,017	+				-0.6
1,081,017	+				+0.6
1,081,022	+				-0.4
1,081,023	-				+0.4
1,081,025	-				-0.2
1,081,030	-				-0.5
1,081,039	+				-0.0
1,081,039	+				-0.2
1,081,039	+				+0.1
1,081,047	-				+1.6
1,081,047	-				-0.5
1,081,047	-				-1.2
1,081,096	-				-0.2
1,081,125	+				+0.1
1,081,133	-				-0.1
1,081,133	-				+1.5
1,081,248	+				-0.0
1,081,296	-				+0.0
1,081,306	+				+0.3
1,081,314	-				-1.2
1,081,314	-				-0.1
1,081,363	+				+0.1
1,081,363	+				+0.6
1,081,385	-				-0.2
1,081,443	+		CCNA_00998	0.18	+0.4
1,081,450	+		CCNA_00998	0.20	+0.3
1,081,479	-		CCNA_00998	0.27	+1.5
1,081,486	+		CCNA_00998	0.28	+0.7
1,081,609	+		CCNA_00998	0.58	+0.3
1,081,614	+		CCNA_00998	0.59	+0.8
1,081,622	-		CCNA_00998	0.61	+0.5
1,081,675	+		CCNA_00998	0.73	+0.7
1,081,675	+		CCNA_00998	0.73	+0.4
1,081,675	+		CCNA_00998	0.73	+0.7
1,081,675	+		CCNA_00998	0.73	+0.5
1,081,681	+		CCNA_00998	0.75	+0.7
1,081,683	-		CCNA_00998	0.75	-1.3
1,081,683	-		CCNA_00998	0.75	-0.5
1,081,689	-		CCNA_00998	0.77	-0.0
1,081,694	-		CCNA_00998	0.78	-1.6
1,081,726	-		CCNA_00998	0.85	-0.7
1,081,735	+		CCNA_00998	0.88	+1.0
1,081,843	+				+0.3
1,081,987	-				+0.0
1,082,040	-		CCNA_00999	0.11	-0.4
1,082,132	+		CCNA_00999	0.30	-0.0
1,082,151	+		CCNA_00999	0.34	-0.6
1,082,179	-		CCNA_00999	0.39	+1.0
1,082,199	+		CCNA_00999	0.43	-0.6
1,082,258	-		CCNA_00999	0.55	+0.7
1,082,337	+		CCNA_00999	0.71	+0.4
1,082,350	+		CCNA_00999	0.73	+0.2
1,082,355	+		CCNA_00999	0.74	-0.7
1,082,358	+		CCNA_00999	0.75	-0.0
1,082,368	-		CCNA_00999	0.77	-1.6
1,082,457	-				-0.3
1,082,559	-		CCNA_01000	0.12	+0.6
1,082,582	-		CCNA_01000	0.24	+0.4
1,082,582	-		CCNA_01000	0.24	+0.1
1,082,582	-		CCNA_01000	0.24	+0.4
1,082,582	-		CCNA_01000	0.24	-0.2
1,082,582	-		CCNA_01000	0.24	+0.0
1,082,712	+				+0.6
1,082,732	-				+1.1
1,082,770	+				+0.6
1,082,770	+				-0.8
1,082,770	+				+1.0
1,082,778	-				-0.7
1,082,778	-				+0.2
1,082,778	-				+0.1
1,082,785	+				+0.6
1,082,785	+				+0.9