Strain Fitness in Caulobacter crescentus NA1000 Δfur around CCNA_00935

Experiment: PYE with CHIR-090 4 ug/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with CHIR-090 4 ug/mL
1,009,700	+		CCNA_00933	0.77	+1.5
1,009,775	-		CCNA_00933	0.82	-0.0
1,009,848	-		CCNA_00933	0.88	-1.7
1,009,863	-		CCNA_00933	0.89	-0.0
1,009,879	+		CCNA_00933	0.90	+0.2
1,009,888	-				+0.0
1,009,931	+				-0.2
1,009,939	-				+0.4
1,009,939	-				-0.4
1,009,939	-				+0.5
1,009,939	-				-1.1
1,009,949	+				-0.5
1,009,951	-				-0.4
1,009,979	+				+0.2
1,010,019	+				+0.4
1,010,074	-				+0.4
1,010,099	-				+0.0
1,010,122	-				-0.1
1,010,173	-		CCNA_00934	0.19	-0.1
1,010,185	-		CCNA_00934	0.21	+0.5
1,010,205	-		CCNA_00934	0.25	-0.3
1,010,210	-		CCNA_00934	0.26	+0.4
1,010,220	-		CCNA_00934	0.28	-1.1
1,010,231	-		CCNA_00934	0.30	-0.2
1,010,303	+		CCNA_00934	0.44	+0.9
1,010,326	-		CCNA_00934	0.48	-1.0
1,010,345	-		CCNA_00934	0.52	+0.2
1,010,355	-		CCNA_00934	0.54	+0.0
1,010,355	-		CCNA_00934	0.54	+0.7
1,010,356	+		CCNA_00934	0.54	+1.0
1,010,373	+		CCNA_00934	0.57	+0.2
1,010,373	+		CCNA_00934	0.57	+0.1
1,010,373	+		CCNA_00934	0.57	-0.6
1,010,425	-		CCNA_00934	0.67	-0.2
1,010,450	+		CCNA_00934	0.72	+1.1
1,010,450	+		CCNA_00934	0.72	+0.8
1,010,458	-		CCNA_00934	0.74	-0.1
1,010,472	-		CCNA_00934	0.76	+0.6
1,010,488	+		CCNA_00934	0.80	+0.0
1,010,504	+		CCNA_00934	0.83	+1.1
1,010,504	+		CCNA_00934	0.83	+0.6
1,010,560	+				-0.2
1,010,578	-				+0.2
1,010,585	-				-0.2
1,010,588	+				+1.4
1,010,588	+				-0.2
1,010,596	-				-0.8
1,010,599	+				+0.9
1,010,614	+				+0.9
1,010,649	-				-0.4
1,010,655	+				+0.9
1,010,663	-				-0.8
1,010,684	-				+0.8
1,010,691	+				-1.1
1,010,702	+				+0.1
1,010,710	-				-0.6
1,010,717	-				-0.6
1,010,762	+				+0.7
1,010,784	-				-0.9
1,010,809	-		CCNA_00935	0.12	-0.1
1,010,910	+		CCNA_00935	0.22	+0.2
1,010,910	+		CCNA_00935	0.22	+0.4
1,010,910	+		CCNA_00935	0.22	+0.3
1,010,918	-		CCNA_00935	0.23	-0.1
1,010,918	-		CCNA_00935	0.23	+1.6
1,010,926	+		CCNA_00935	0.24	-0.3
1,010,949	-		CCNA_00935	0.26	-1.2
1,010,985	+		CCNA_00935	0.30	-0.7
1,010,985	+		CCNA_00935	0.30	-0.7
1,010,993	-		CCNA_00935	0.30	+0.3
1,010,993	-		CCNA_00935	0.30	-0.1
1,010,993	-		CCNA_00935	0.30	+0.3
1,011,032	+		CCNA_00935	0.34	+0.2
1,011,039	-		CCNA_00935	0.35	+1.0
1,011,099	+		CCNA_00935	0.41	-1.2
1,011,104	+		CCNA_00935	0.42	-0.5
1,011,107	-		CCNA_00935	0.42	+0.3
1,011,109	+		CCNA_00935	0.42	+0.3
1,011,125	+		CCNA_00935	0.44	+0.8
1,011,125	+		CCNA_00935	0.44	+0.7
1,011,134	+		CCNA_00935	0.45	+0.2
1,011,143	+		CCNA_00935	0.46	-1.0
1,011,143	+		CCNA_00935	0.46	-0.5
1,011,164	+		CCNA_00935	0.48	+0.7
1,011,171	+		CCNA_00935	0.48	-0.6
1,011,239	+		CCNA_00935	0.55	+1.2
1,011,273	+		CCNA_00935	0.59	-0.2
1,011,281	-		CCNA_00935	0.60	+0.4
1,011,295	+		CCNA_00935	0.61	-0.2
1,011,306	+		CCNA_00935	0.62	+0.2
1,011,311	+		CCNA_00935	0.63	-1.9
1,011,314	-		CCNA_00935	0.63	+0.2
1,011,320	+		CCNA_00935	0.64	-0.2
1,011,327	-		CCNA_00935	0.64	+0.3
1,011,344	+		CCNA_00935	0.66	-0.9
1,011,344	+		CCNA_00935	0.66	+0.2
1,011,344	+		CCNA_00935	0.66	+1.0
1,011,352	-		CCNA_00935	0.67	+0.6
1,011,352	-		CCNA_00935	0.67	-0.0
1,011,352	-		CCNA_00935	0.67	-0.4
1,011,352	-		CCNA_00935	0.67	+0.4
1,011,366	+		CCNA_00935	0.68	+0.0
1,011,374	-		CCNA_00935	0.69	-1.1
1,011,394	+		CCNA_00935	0.71	+0.6
1,011,421	+		CCNA_00935	0.74	-0.3
1,011,424	-		CCNA_00935	0.74	-0.6
1,011,424	-		CCNA_00935	0.74	+0.2
1,011,425	-		CCNA_00935	0.74	+0.1
1,011,470	-		CCNA_00935	0.79	-0.7
1,011,470	-		CCNA_00935	0.79	+0.3
1,011,529	+		CCNA_00935	0.85	+0.3
1,011,536	+		CCNA_00935	0.85	-0.5
1,011,565	+		CCNA_00935	0.88	+0.0
1,011,601	+				+0.1
1,011,617	+				+0.7
1,011,625	-				-0.7
1,011,661	-				-2.2
1,011,843	-				+1.0
1,011,894	+		CCNA_00936	0.10	+0.7
1,011,894	+		CCNA_00936	0.10	+0.2
1,011,894	+		CCNA_00936	0.10	-0.6
1,011,938	+		CCNA_00936	0.15	+0.0
1,011,941	-		CCNA_00936	0.16	-0.2
1,011,948	+		CCNA_00936	0.16	+0.1
1,011,968	+		CCNA_00936	0.19	-0.0
1,011,975	-		CCNA_00936	0.20	+0.7
1,012,028	-		CCNA_00936	0.26	+1.1
1,012,029	-		CCNA_00936	0.26	-1.5
1,012,076	+		CCNA_00936	0.32	-0.4
1,012,099	+		CCNA_00936	0.34	+0.4
1,012,122	+		CCNA_00936	0.37	-0.4
1,012,127	+		CCNA_00936	0.38	-0.2
1,012,159	+		CCNA_00936	0.42	-0.1
1,012,159	+		CCNA_00936	0.42	+1.8
1,012,166	-		CCNA_00936	0.42	-0.2
1,012,214	-		CCNA_00936	0.48	-0.6
1,012,236	+		CCNA_00936	0.51	+0.4
1,012,251	+		CCNA_00936	0.53	-0.0
1,012,270	+		CCNA_00936	0.55	+1.8
1,012,292	-		CCNA_00936	0.57	+0.1
1,012,335	+		CCNA_00936	0.62	-0.6
1,012,340	+		CCNA_00936	0.63	-0.1
1,012,360	+		CCNA_00936	0.65	-1.2
1,012,368	-		CCNA_00936	0.66	+0.1
1,012,398	-		CCNA_00936	0.70	-0.2
1,012,413	-		CCNA_00936	0.72	+0.0
1,012,429	+		CCNA_00936	0.74	-0.1
1,012,437	+		CCNA_00936	0.75	+0.3
1,012,454	-		CCNA_00936	0.77	+0.6
1,012,468	+		CCNA_00936	0.78	+0.3
1,012,470	+		CCNA_00936	0.79	-0.9
1,012,478	-		CCNA_00936	0.80	-2.2
1,012,529	+		CCNA_00936	0.86	+2.5
1,012,532	-		CCNA_00936	0.86	+0.6
1,012,532	-		CCNA_00936	0.86	+0.1
1,012,537	-		CCNA_00936	0.87	-0.2
1,012,587	-				-0.2
1,012,607	+				+0.4
1,012,617	+				+0.4
1,012,625	-				-0.1