Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21550 and CA264_21555 are separated by 85 nucleotides CA264_21555 and CA264_21560 are separated by 8 nucleotides CA264_21560 and CA264_21565 are separated by 103 nucleotides CA264_21565 and CA264_21570 are separated by 109 nucleotides CA264_21570 and CA264_21575 are separated by 68 nucleotides
CA264_21550: CA264_21550 - hypothetical protein, at 178,043 to 178,714
_21550
CA264_21555: CA264_21555 - phosphoribosylpyrophosphate synthetase, at 178,800 to 179,114
_21555
CA264_21560: CA264_21560 - copper-translocating P-type ATPase, at 179,123 to 181,267
_21560
CA264_21565: CA264_21565 - hypothetical protein, at 181,371 to 181,721
_21565
CA264_21570: CA264_21570 - hypothetical protein, at 181,831 to 182,100
_21570
CA264_21575: CA264_21575 - (2Fe-2S)-binding protein, at 182,169 to 183,701
_21575
Position (kb) 179
180
181
182 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 178.384 kb on - strand, within CA264_21550 at 178.393 kb on - strand, within CA264_21550 at 178.393 kb on - strand, within CA264_21550 at 178.395 kb on + strand, within CA264_21550 at 178.412 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.415 kb on + strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.416 kb on - strand, within CA264_21550 at 178.473 kb on + strand, within CA264_21550 at 178.493 kb on + strand, within CA264_21550 at 178.616 kb on + strand, within CA264_21550 at 178.617 kb on - strand, within CA264_21550 at 178.656 kb on + strand at 178.660 kb on + strand at 178.660 kb on + strand at 178.661 kb on - strand at 178.661 kb on - strand at 178.662 kb on + strand at 178.662 kb on + strand at 178.689 kb on - strand at 178.718 kb on - strand at 178.772 kb on - strand at 178.772 kb on - strand at 178.775 kb on + strand at 178.778 kb on - strand at 178.816 kb on - strand at 178.875 kb on - strand, within CA264_21555 at 178.875 kb on - strand, within CA264_21555 at 178.921 kb on + strand, within CA264_21555 at 178.951 kb on + strand, within CA264_21555 at 178.951 kb on + strand, within CA264_21555 at 178.986 kb on - strand, within CA264_21555 at 179.024 kb on - strand, within CA264_21555 at 179.055 kb on + strand, within CA264_21555 at 179.055 kb on + strand, within CA264_21555 at 179.056 kb on - strand, within CA264_21555 at 179.056 kb on - strand, within CA264_21555 at 179.112 kb on + strand at 179.112 kb on + strand at 179.123 kb on - strand at 179.286 kb on + strand at 179.286 kb on + strand at 179.353 kb on + strand, within CA264_21560 at 179.353 kb on + strand, within CA264_21560 at 179.423 kb on - strand, within CA264_21560 at 179.443 kb on + strand, within CA264_21560 at 179.489 kb on + strand, within CA264_21560 at 179.496 kb on - strand, within CA264_21560 at 179.536 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.591 kb on + strand, within CA264_21560 at 179.592 kb on - strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.595 kb on + strand, within CA264_21560 at 179.596 kb on - strand, within CA264_21560 at 179.596 kb on - strand, within CA264_21560 at 179.596 kb on - strand, within CA264_21560 at 179.596 kb on - strand, within CA264_21560 at 179.704 kb on - strand, within CA264_21560 at 179.767 kb on + strand, within CA264_21560 at 179.768 kb on - strand, within CA264_21560 at 179.768 kb on - strand, within CA264_21560 at 179.768 kb on - strand, within CA264_21560 at 179.785 kb on + strand, within CA264_21560 at 179.879 kb on - strand, within CA264_21560 at 179.882 kb on + strand, within CA264_21560 at 179.883 kb on - strand, within CA264_21560 at 179.883 kb on - strand, within CA264_21560 at 179.962 kb on - strand, within CA264_21560 at 180.014 kb on + strand, within CA264_21560 at 180.031 kb on + strand, within CA264_21560 at 180.032 kb on - strand, within CA264_21560 at 180.132 kb on + strand, within CA264_21560 at 180.138 kb on + strand, within CA264_21560 at 180.187 kb on + strand, within CA264_21560 at 180.187 kb on + strand, within CA264_21560 at 180.188 kb on - strand, within CA264_21560 at 180.237 kb on + strand, within CA264_21560 at 180.244 kb on - strand, within CA264_21560 at 180.259 kb on + strand, within CA264_21560 at 180.275 kb on - strand, within CA264_21560 at 180.278 kb on - strand, within CA264_21560 at 180.362 kb on - strand, within CA264_21560 at 180.390 kb on + strand, within CA264_21560 at 180.400 kb on + strand, within CA264_21560 at 180.468 kb on - strand, within CA264_21560 at 180.559 kb on - strand, within CA264_21560 at 180.592 kb on - strand, within CA264_21560 at 180.606 kb on - strand, within CA264_21560 at 180.617 kb on + strand, within CA264_21560 at 180.618 kb on - strand, within CA264_21560 at 180.624 kb on + strand, within CA264_21560 at 180.671 kb on + strand, within CA264_21560 at 180.671 kb on + strand, within CA264_21560 at 180.672 kb on - strand, within CA264_21560 at 180.672 kb on - strand, within CA264_21560 at 180.672 kb on - strand, within CA264_21560 at 180.672 kb on - strand, within CA264_21560 at 180.672 kb on - strand, within CA264_21560 at 180.673 kb on + strand, within CA264_21560 at 180.674 kb on - strand, within CA264_21560 at 180.674 kb on - strand, within CA264_21560 at 180.704 kb on - strand, within CA264_21560 at 180.704 kb on - strand, within CA264_21560 at 180.704 kb on - strand, within CA264_21560 at 180.705 kb on + strand, within CA264_21560 at 180.705 kb on + strand, within CA264_21560 at 180.748 kb on + strand, within CA264_21560 at 180.748 kb on + strand, within CA264_21560 at 180.753 kb on + strand, within CA264_21560 at 180.787 kb on + strand, within CA264_21560 at 180.808 kb on - strand, within CA264_21560 at 180.811 kb on + strand, within CA264_21560 at 180.858 kb on + strand, within CA264_21560 at 180.885 kb on + strand, within CA264_21560 at 180.981 kb on + strand, within CA264_21560 at 181.023 kb on + strand, within CA264_21560 at 181.029 kb on + strand, within CA264_21560 at 181.107 kb on + strand at 181.121 kb on + strand at 181.121 kb on + strand at 181.122 kb on - strand at 181.158 kb on + strand at 181.158 kb on + strand at 181.160 kb on + strand at 181.160 kb on + strand at 181.160 kb on + strand at 181.161 kb on - strand at 181.161 kb on - strand at 181.204 kb on - strand at 181.234 kb on + strand at 181.261 kb on + strand at 181.265 kb on + strand at 181.266 kb on - strand at 181.269 kb on - strand at 181.271 kb on + strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.272 kb on - strand at 181.281 kb on + strand at 181.281 kb on + strand at 181.282 kb on - strand at 181.287 kb on - strand at 181.296 kb on + strand at 181.297 kb on - strand at 181.298 kb on + strand at 181.298 kb on + strand at 181.299 kb on - strand at 181.315 kb on - strand at 181.329 kb on - strand at 181.344 kb on + strand at 181.345 kb on - strand at 181.345 kb on - strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.346 kb on + strand at 181.347 kb on - strand at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.414 kb on + strand, within CA264_21565 at 181.415 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.418 kb on - strand, within CA264_21565 at 181.484 kb on + strand, within CA264_21565 at 181.505 kb on + strand, within CA264_21565 at 181.506 kb on - strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.534 kb on + strand, within CA264_21565 at 181.538 kb on + strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.539 kb on - strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.543 kb on + strand, within CA264_21565 at 181.544 kb on - strand, within CA264_21565 at 181.588 kb on + strand, within CA264_21565 at 181.591 kb on + strand, within CA264_21565 at 181.777 kb on - strand at 181.787 kb on + strand at 181.788 kb on - strand at 181.808 kb on - strand at 181.818 kb on + strand at 181.819 kb on - strand at 181.821 kb on + strand at 181.841 kb on + strand at 181.841 kb on + strand at 181.842 kb on - strand at 181.842 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.846 kb on - strand at 181.865 kb on + strand, within CA264_21570 at 181.865 kb on + strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.866 kb on - strand, within CA264_21570 at 181.870 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.931 kb on + strand, within CA264_21570 at 181.932 kb on - strand, within CA264_21570 at 182.004 kb on + strand, within CA264_21570 at 182.039 kb on - strand, within CA264_21570 at 182.105 kb on - strand at 182.139 kb on + strand at 182.144 kb on - strand at 182.147 kb on + strand at 182.148 kb on - strand at 182.163 kb on + strand at 182.164 kb on - strand at 182.189 kb on + strand at 182.192 kb on - strand at 182.248 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 178,384 - CA264_21550 0.51 -0.2 178,393 - CA264_21550 0.52 +0.0 178,393 - CA264_21550 0.52 -0.2 178,395 + CA264_21550 0.52 -0.6 178,412 + CA264_21550 0.55 -1.0 178,415 + CA264_21550 0.55 +0.6 178,415 + CA264_21550 0.55 +0.2 178,415 + CA264_21550 0.55 +0.3 178,415 + CA264_21550 0.55 -0.3 178,415 + CA264_21550 0.55 -0.4 178,415 + CA264_21550 0.55 -0.6 178,416 - CA264_21550 0.56 +0.6 178,416 - CA264_21550 0.56 -0.3 178,416 - CA264_21550 0.56 -0.6 178,416 - CA264_21550 0.56 -0.5 178,473 + CA264_21550 0.64 -0.8 178,493 + CA264_21550 0.67 -0.6 178,616 + CA264_21550 0.85 +0.8 178,617 - CA264_21550 0.85 -0.3 178,656 + -0.8 178,660 + -0.8 178,660 + -0.3 178,661 - -0.8 178,661 - +0.1 178,662 + -0.0 178,662 + -0.3 178,689 - -1.6 178,718 - -0.0 178,772 - +0.6 178,772 - -0.7 178,775 + -0.3 178,778 - -1.1 178,816 - -0.2 178,875 - CA264_21555 0.24 +0.3 178,875 - CA264_21555 0.24 -1.1 178,921 + CA264_21555 0.38 +1.5 178,951 + CA264_21555 0.48 -1.2 178,951 + CA264_21555 0.48 -0.3 178,986 - CA264_21555 0.59 -0.1 179,024 - CA264_21555 0.71 -1.3 179,055 + CA264_21555 0.81 -1.5 179,055 + CA264_21555 0.81 -0.4 179,056 - CA264_21555 0.81 -0.6 179,056 - CA264_21555 0.81 -0.4 179,112 + -1.1 179,112 + -0.6 179,123 - +0.7 179,286 + +0.2 179,286 + +0.2 179,353 + CA264_21560 0.11 +0.1 179,353 + CA264_21560 0.11 -0.6 179,423 - CA264_21560 0.14 +0.3 179,443 + CA264_21560 0.15 -0.3 179,489 + CA264_21560 0.17 -0.7 179,496 - CA264_21560 0.17 -0.3 179,536 + CA264_21560 0.19 -0.6 179,591 + CA264_21560 0.22 -0.7 179,591 + CA264_21560 0.22 -1.6 179,591 + CA264_21560 0.22 -0.7 179,591 + CA264_21560 0.22 -0.8 179,591 + CA264_21560 0.22 -0.6 179,591 + CA264_21560 0.22 -0.2 179,591 + CA264_21560 0.22 -0.5 179,591 + CA264_21560 0.22 +0.2 179,592 - CA264_21560 0.22 -0.1 179,595 + CA264_21560 0.22 -0.4 179,595 + CA264_21560 0.22 +0.8 179,595 + CA264_21560 0.22 -1.1 179,595 + CA264_21560 0.22 -0.2 179,595 + CA264_21560 0.22 +0.0 179,595 + CA264_21560 0.22 -0.9 179,596 - CA264_21560 0.22 +1.1 179,596 - CA264_21560 0.22 -0.2 179,596 - CA264_21560 0.22 -0.4 179,596 - CA264_21560 0.22 -1.1 179,704 - CA264_21560 0.27 -0.1 179,767 + CA264_21560 0.30 -0.6 179,768 - CA264_21560 0.30 -0.4 179,768 - CA264_21560 0.30 +0.6 179,768 - CA264_21560 0.30 -0.9 179,785 + CA264_21560 0.31 -0.3 179,879 - CA264_21560 0.35 -1.6 179,882 + CA264_21560 0.35 -0.7 179,883 - CA264_21560 0.35 +0.4 179,883 - CA264_21560 0.35 +0.0 179,962 - CA264_21560 0.39 +1.0 180,014 + CA264_21560 0.42 -0.2 180,031 + CA264_21560 0.42 -1.0 180,032 - CA264_21560 0.42 -1.7 180,132 + CA264_21560 0.47 -2.3 180,138 + CA264_21560 0.47 -0.6 180,187 + CA264_21560 0.50 +0.3 180,187 + CA264_21560 0.50 -0.3 180,188 - CA264_21560 0.50 +0.1 180,237 + CA264_21560 0.52 -0.1 180,244 - CA264_21560 0.52 -0.3 180,259 + CA264_21560 0.53 -0.4 180,275 - CA264_21560 0.54 -0.2 180,278 - CA264_21560 0.54 -0.5 180,362 - CA264_21560 0.58 -0.3 180,390 + CA264_21560 0.59 -0.4 180,400 + CA264_21560 0.60 -0.0 180,468 - CA264_21560 0.63 -1.1 180,559 - CA264_21560 0.67 -0.3 180,592 - CA264_21560 0.68 -1.1 180,606 - CA264_21560 0.69 +0.3 180,617 + CA264_21560 0.70 +0.1 180,618 - CA264_21560 0.70 +0.2 180,624 + CA264_21560 0.70 +1.0 180,671 + CA264_21560 0.72 -0.4 180,671 + CA264_21560 0.72 +0.0 180,672 - CA264_21560 0.72 +0.2 180,672 - CA264_21560 0.72 -0.2 180,672 - CA264_21560 0.72 -0.6 180,672 - CA264_21560 0.72 -1.7 180,672 - CA264_21560 0.72 +0.2 180,673 + CA264_21560 0.72 +1.2 180,674 - CA264_21560 0.72 +0.8 180,674 - CA264_21560 0.72 -1.4 180,704 - CA264_21560 0.74 +0.1 180,704 - CA264_21560 0.74 -1.0 180,704 - CA264_21560 0.74 +0.7 180,705 + CA264_21560 0.74 +0.4 180,705 + CA264_21560 0.74 +0.4 180,748 + CA264_21560 0.76 -1.0 180,748 + CA264_21560 0.76 -0.4 180,753 + CA264_21560 0.76 -0.8 180,787 + CA264_21560 0.78 -0.4 180,808 - CA264_21560 0.79 +0.5 180,811 + CA264_21560 0.79 +0.6 180,858 + CA264_21560 0.81 -0.8 180,885 + CA264_21560 0.82 -0.4 180,981 + CA264_21560 0.87 -1.6 181,023 + CA264_21560 0.89 -0.6 181,029 + CA264_21560 0.89 +0.4 181,107 + -1.0 181,121 + +1.0 181,121 + -1.7 181,122 - -0.1 181,158 + +0.1 181,158 + -0.1 181,160 + +0.4 181,160 + +0.0 181,160 + -0.4 181,161 - -1.8 181,161 - -0.6 181,204 - +0.5 181,234 + +0.0 181,261 + -0.2 181,265 + -0.2 181,266 - +0.6 181,269 - +2.0 181,271 + -0.4 181,272 - +0.3 181,272 - -0.0 181,272 - -0.2 181,281 + -1.5 181,281 + -1.7 181,282 - -0.6 181,287 - +1.4 181,296 + +0.6 181,297 - +0.7 181,298 + -0.2 181,298 + +0.5 181,299 - -1.2 181,315 - +1.8 181,329 - -0.1 181,344 + -0.2 181,345 - +0.6 181,345 - -1.1 181,346 + +0.6 181,346 + +0.1 181,346 + -0.3 181,347 - +0.1 181,414 + CA264_21565 0.12 -0.7 181,414 + CA264_21565 0.12 +0.0 181,414 + CA264_21565 0.12 +0.2 181,415 - CA264_21565 0.13 -1.1 181,418 - CA264_21565 0.13 +0.2 181,418 - CA264_21565 0.13 +0.2 181,484 + CA264_21565 0.32 -0.5 181,505 + CA264_21565 0.38 -1.7 181,506 - CA264_21565 0.38 +0.2 181,534 + CA264_21565 0.46 -0.0 181,534 + CA264_21565 0.46 +0.3 181,534 + CA264_21565 0.46 -0.3 181,534 + CA264_21565 0.46 -1.3 181,538 + CA264_21565 0.48 +0.0 181,539 - CA264_21565 0.48 +0.6 181,539 - CA264_21565 0.48 +0.8 181,543 + CA264_21565 0.49 -0.9 181,543 + CA264_21565 0.49 -1.6 181,543 + CA264_21565 0.49 -0.8 181,544 - CA264_21565 0.49 +0.0 181,588 + CA264_21565 0.62 -0.6 181,591 + CA264_21565 0.63 -0.7 181,777 - -0.8 181,787 + -0.5 181,788 - +0.9 181,808 - -2.1 181,818 + -0.7 181,819 - -0.6 181,821 + -0.8 181,841 + -0.4 181,841 + -1.1 181,842 - -0.8 181,842 - -0.9 181,846 - -0.3 181,846 - +0.0 181,846 - -1.7 181,865 + CA264_21570 0.13 -3.0 181,865 + CA264_21570 0.13 -0.6 181,866 - CA264_21570 0.13 +0.3 181,866 - CA264_21570 0.13 +0.9 181,870 + CA264_21570 0.14 +0.2 181,931 + CA264_21570 0.37 -0.2 181,931 + CA264_21570 0.37 +0.8 181,932 - CA264_21570 0.37 -0.3 182,004 + CA264_21570 0.64 -0.4 182,039 - CA264_21570 0.77 -0.6 182,105 - +0.4 182,139 + +0.0 182,144 - +0.3 182,147 + -0.6 182,148 - +1.3 182,163 + -0.1 182,164 - -0.2 182,189 + +0.1 182,192 - +0.3 182,248 - -0.3
Or see this region's nucleotide sequence