Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21510 and CA264_21515 are separated by 324 nucleotides CA264_21515 and CA264_21520 are separated by 39 nucleotides CA264_21520 and CA264_21525 are separated by 156 nucleotides
CA264_21510: CA264_21510 - copper oxidase, at 170,408 to 172,942
_21510
CA264_21515: CA264_21515 - MATE family efflux transporter, at 173,267 to 174,706
_21515
CA264_21520: CA264_21520 - hypothetical protein, at 174,746 to 175,450
_21520
CA264_21525: CA264_21525 - DUF305 domain-containing protein, at 175,607 to 176,320
_21525
Position (kb) 173
174
175 Strain fitness (log2 ratio) -2
-1
0
1
2 at 172.284 kb on + strand, within CA264_21510 at 172.285 kb on - strand, within CA264_21510 at 172.285 kb on - strand, within CA264_21510 at 172.285 kb on - strand, within CA264_21510 at 172.285 kb on - strand, within CA264_21510 at 172.319 kb on - strand, within CA264_21510 at 172.330 kb on - strand, within CA264_21510 at 172.360 kb on - strand, within CA264_21510 at 172.448 kb on + strand, within CA264_21510 at 172.449 kb on - strand, within CA264_21510 at 172.475 kb on - strand, within CA264_21510 at 172.482 kb on + strand, within CA264_21510 at 172.482 kb on + strand, within CA264_21510 at 172.483 kb on - strand, within CA264_21510 at 172.515 kb on - strand, within CA264_21510 at 172.570 kb on + strand, within CA264_21510 at 172.626 kb on + strand, within CA264_21510 at 172.698 kb on - strand at 172.909 kb on + strand at 172.909 kb on + strand at 172.918 kb on + strand at 172.952 kb on - strand at 172.952 kb on - strand at 172.953 kb on + strand at 172.953 kb on + strand at 172.953 kb on + strand at 173.004 kb on + strand at 173.005 kb on - strand at 173.005 kb on - strand at 173.011 kb on - strand at 173.052 kb on + strand at 173.060 kb on - strand at 173.068 kb on - strand at 173.112 kb on + strand at 173.112 kb on + strand at 173.113 kb on - strand at 173.113 kb on - strand at 173.113 kb on - strand at 173.116 kb on - strand at 173.116 kb on - strand at 173.116 kb on - strand at 173.116 kb on - strand at 173.141 kb on - strand at 173.141 kb on - strand at 173.141 kb on - strand at 173.158 kb on + strand at 173.158 kb on + strand at 173.158 kb on + strand at 173.159 kb on - strand at 173.166 kb on - strand at 173.168 kb on + strand at 173.168 kb on + strand at 173.169 kb on - strand at 173.169 kb on - strand at 173.192 kb on + strand at 173.200 kb on + strand at 173.245 kb on - strand at 173.265 kb on - strand at 173.268 kb on + strand at 173.268 kb on + strand at 173.269 kb on - strand at 173.269 kb on - strand at 173.271 kb on + strand at 173.276 kb on - strand at 173.276 kb on - strand at 173.279 kb on - strand at 173.362 kb on + strand at 173.379 kb on + strand at 173.413 kb on + strand, within CA264_21515 at 173.413 kb on + strand, within CA264_21515 at 173.438 kb on - strand, within CA264_21515 at 173.466 kb on + strand, within CA264_21515 at 173.466 kb on + strand, within CA264_21515 at 173.467 kb on - strand, within CA264_21515 at 173.467 kb on - strand, within CA264_21515 at 173.470 kb on - strand, within CA264_21515 at 173.497 kb on + strand, within CA264_21515 at 173.497 kb on + strand, within CA264_21515 at 173.514 kb on + strand, within CA264_21515 at 173.547 kb on + strand, within CA264_21515 at 173.548 kb on - strand, within CA264_21515 at 173.568 kb on - strand, within CA264_21515 at 173.729 kb on + strand, within CA264_21515 at 173.756 kb on + strand, within CA264_21515 at 173.757 kb on - strand, within CA264_21515 at 173.757 kb on - strand, within CA264_21515 at 173.771 kb on + strand, within CA264_21515 at 173.771 kb on + strand, within CA264_21515 at 173.772 kb on - strand, within CA264_21515 at 173.795 kb on - strand, within CA264_21515 at 173.824 kb on + strand, within CA264_21515 at 173.826 kb on + strand, within CA264_21515 at 173.827 kb on - strand, within CA264_21515 at 173.904 kb on + strand, within CA264_21515 at 173.934 kb on - strand, within CA264_21515 at 173.962 kb on + strand, within CA264_21515 at 174.040 kb on - strand, within CA264_21515 at 174.042 kb on + strand, within CA264_21515 at 174.136 kb on + strand, within CA264_21515 at 174.144 kb on + strand, within CA264_21515 at 174.175 kb on + strand, within CA264_21515 at 174.176 kb on - strand, within CA264_21515 at 174.293 kb on + strand, within CA264_21515 at 174.302 kb on + strand, within CA264_21515 at 174.303 kb on - strand, within CA264_21515 at 174.303 kb on - strand, within CA264_21515 at 174.395 kb on - strand, within CA264_21515 at 174.395 kb on - strand, within CA264_21515 at 174.479 kb on + strand, within CA264_21515 at 174.501 kb on + strand, within CA264_21515 at 174.502 kb on - strand, within CA264_21515 at 174.590 kb on - strand at 174.612 kb on - strand at 174.614 kb on + strand at 174.653 kb on - strand at 174.683 kb on + strand at 174.686 kb on + strand at 174.686 kb on + strand at 174.686 kb on + strand at 174.713 kb on + strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.714 kb on - strand at 174.726 kb on - strand at 174.801 kb on + strand at 174.801 kb on + strand at 174.802 kb on - strand at 174.811 kb on + strand at 174.813 kb on + strand at 174.813 kb on + strand at 174.814 kb on - strand at 174.815 kb on + strand at 174.815 kb on + strand at 174.815 kb on + strand at 174.869 kb on - strand, within CA264_21520 at 174.925 kb on - strand, within CA264_21520 at 174.935 kb on - strand, within CA264_21520 at 174.949 kb on + strand, within CA264_21520 at 174.984 kb on - strand, within CA264_21520 at 174.998 kb on + strand, within CA264_21520 at 174.999 kb on - strand, within CA264_21520 at 174.999 kb on - strand, within CA264_21520 at 175.104 kb on + strand, within CA264_21520 at 175.182 kb on - strand, within CA264_21520 at 175.183 kb on + strand, within CA264_21520 at 175.184 kb on - strand, within CA264_21520 at 175.184 kb on - strand, within CA264_21520 at 175.191 kb on + strand, within CA264_21520 at 175.300 kb on + strand, within CA264_21520 at 175.322 kb on + strand, within CA264_21520 at 175.322 kb on + strand, within CA264_21520 at 175.384 kb on + strand at 175.384 kb on + strand at 175.385 kb on - strand at 175.385 kb on - strand at 175.385 kb on - strand at 175.420 kb on - strand at 175.420 kb on - strand at 175.441 kb on + strand at 175.450 kb on + strand at 175.467 kb on - strand at 175.469 kb on + strand at 175.470 kb on - strand at 175.470 kb on - strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.471 kb on + strand at 175.540 kb on - strand at 175.583 kb on + strand at 175.609 kb on - strand at 175.668 kb on - strand at 175.691 kb on + strand, within CA264_21525 at 175.692 kb on - strand, within CA264_21525
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 172,284 + CA264_21510 0.74 +0.1 172,285 - CA264_21510 0.74 -0.3 172,285 - CA264_21510 0.74 -0.4 172,285 - CA264_21510 0.74 +0.0 172,285 - CA264_21510 0.74 -1.6 172,319 - CA264_21510 0.75 -0.3 172,330 - CA264_21510 0.76 -0.1 172,360 - CA264_21510 0.77 -0.1 172,448 + CA264_21510 0.80 +1.0 172,449 - CA264_21510 0.81 -1.3 172,475 - CA264_21510 0.82 -0.3 172,482 + CA264_21510 0.82 -0.2 172,482 + CA264_21510 0.82 -1.0 172,483 - CA264_21510 0.82 +0.7 172,515 - CA264_21510 0.83 -0.5 172,570 + CA264_21510 0.85 +0.9 172,626 + CA264_21510 0.87 -0.2 172,698 - -1.1 172,909 + -0.7 172,909 + -0.6 172,918 + +0.1 172,952 - -0.1 172,952 - +0.4 172,953 + +0.3 172,953 + -0.5 172,953 + +1.2 173,004 + +0.1 173,005 - +0.8 173,005 - +0.6 173,011 - +0.8 173,052 + +0.3 173,060 - -0.1 173,068 - +0.4 173,112 + -1.7 173,112 + +0.5 173,113 - -0.1 173,113 - +0.6 173,113 - +0.6 173,116 - -0.7 173,116 - +0.1 173,116 - +0.4 173,116 - +1.3 173,141 - -0.1 173,141 - +1.0 173,141 - -0.1 173,158 + -0.7 173,158 + +0.0 173,158 + -0.1 173,159 - -1.2 173,166 - +1.2 173,168 + -1.0 173,168 + +1.2 173,169 - +0.2 173,169 - +0.6 173,192 + +1.4 173,200 + +0.8 173,245 - +0.7 173,265 - -0.1 173,268 + -2.4 173,268 + +0.1 173,269 - +0.4 173,269 - +0.1 173,271 + -0.2 173,276 - +0.3 173,276 - +0.8 173,279 - +0.8 173,362 + -0.1 173,379 + -0.5 173,413 + CA264_21515 0.10 -0.6 173,413 + CA264_21515 0.10 +0.5 173,438 - CA264_21515 0.12 -0.1 173,466 + CA264_21515 0.14 -0.0 173,466 + CA264_21515 0.14 -0.1 173,467 - CA264_21515 0.14 -1.5 173,467 - CA264_21515 0.14 -0.4 173,470 - CA264_21515 0.14 +0.2 173,497 + CA264_21515 0.16 +0.5 173,497 + CA264_21515 0.16 +0.2 173,514 + CA264_21515 0.17 -0.1 173,547 + CA264_21515 0.19 +1.1 173,548 - CA264_21515 0.20 +0.0 173,568 - CA264_21515 0.21 +0.6 173,729 + CA264_21515 0.32 -0.2 173,756 + CA264_21515 0.34 -0.1 173,757 - CA264_21515 0.34 +0.8 173,757 - CA264_21515 0.34 -0.2 173,771 + CA264_21515 0.35 +0.2 173,771 + CA264_21515 0.35 +0.5 173,772 - CA264_21515 0.35 +1.0 173,795 - CA264_21515 0.37 -1.1 173,824 + CA264_21515 0.39 -0.6 173,826 + CA264_21515 0.39 +0.5 173,827 - CA264_21515 0.39 -0.6 173,904 + CA264_21515 0.44 -0.7 173,934 - CA264_21515 0.46 -0.9 173,962 + CA264_21515 0.48 -0.4 174,040 - CA264_21515 0.54 -0.3 174,042 + CA264_21515 0.54 -0.3 174,136 + CA264_21515 0.60 +0.4 174,144 + CA264_21515 0.61 -0.1 174,175 + CA264_21515 0.63 -1.4 174,176 - CA264_21515 0.63 +0.8 174,293 + CA264_21515 0.71 +0.2 174,302 + CA264_21515 0.72 +0.7 174,303 - CA264_21515 0.72 -0.3 174,303 - CA264_21515 0.72 -1.7 174,395 - CA264_21515 0.78 +1.0 174,395 - CA264_21515 0.78 -0.0 174,479 + CA264_21515 0.84 +0.7 174,501 + CA264_21515 0.86 -0.8 174,502 - CA264_21515 0.86 -0.5 174,590 - -0.2 174,612 - -0.3 174,614 + +0.4 174,653 - -0.4 174,683 + -0.8 174,686 + +2.0 174,686 + +0.1 174,686 + -0.3 174,713 + +0.1 174,714 - -0.2 174,714 - +0.7 174,714 - +0.3 174,714 - +0.0 174,726 - +0.8 174,801 + -0.3 174,801 + -0.5 174,802 - -1.0 174,811 + -0.0 174,813 + +0.8 174,813 + +0.0 174,814 - +2.0 174,815 + +2.6 174,815 + +0.4 174,815 + -0.1 174,869 - CA264_21520 0.17 +0.5 174,925 - CA264_21520 0.25 -0.9 174,935 - CA264_21520 0.27 -0.4 174,949 + CA264_21520 0.29 +0.8 174,984 - CA264_21520 0.34 -0.1 174,998 + CA264_21520 0.36 -0.8 174,999 - CA264_21520 0.36 +0.6 174,999 - CA264_21520 0.36 -1.0 175,104 + CA264_21520 0.51 -0.7 175,182 - CA264_21520 0.62 -0.3 175,183 + CA264_21520 0.62 +0.3 175,184 - CA264_21520 0.62 +1.5 175,184 - CA264_21520 0.62 -0.4 175,191 + CA264_21520 0.63 +0.2 175,300 + CA264_21520 0.79 +0.3 175,322 + CA264_21520 0.82 +0.7 175,322 + CA264_21520 0.82 +0.1 175,384 + -0.7 175,384 + -0.6 175,385 - +0.4 175,385 - +0.6 175,385 - -0.3 175,420 - -1.1 175,420 - -0.2 175,441 + +0.3 175,450 + -0.5 175,467 - -1.3 175,469 + -0.2 175,470 - -0.8 175,470 - -0.3 175,471 + +0.6 175,471 + +0.2 175,471 + -0.6 175,471 + +0.0 175,471 + +0.7 175,540 - -0.8 175,583 + +0.3 175,609 - -0.9 175,668 - -0.4 175,691 + CA264_21525 0.12 +0.7 175,692 - CA264_21525 0.12 +0.2
Or see this region's nucleotide sequence