Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_21370 and CA264_21375 are separated by 94 nucleotides CA264_21375 and CA264_21380 are separated by 11 nucleotides
CA264_21370: CA264_21370 - hypothetical protein, at 138,206 to 139,042
_21370
CA264_21375: CA264_21375 - hypothetical protein, at 139,137 to 139,643
_21375
CA264_21380: CA264_21380 - hypothetical protein, at 139,655 to 140,869
_21380
Position (kb)
139
140 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 138.200 kb on + strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.201 kb on - strand at 138.220 kb on + strand at 138.237 kb on - strand at 138.268 kb on - strand at 138.273 kb on + strand at 138.281 kb on - strand at 138.281 kb on - strand at 138.311 kb on - strand, within CA264_21370 at 138.349 kb on + strand, within CA264_21370 at 138.350 kb on - strand, within CA264_21370 at 138.351 kb on + strand, within CA264_21370 at 138.355 kb on + strand, within CA264_21370 at 138.356 kb on - strand, within CA264_21370 at 138.396 kb on - strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.410 kb on + strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.411 kb on - strand, within CA264_21370 at 138.412 kb on + strand, within CA264_21370 at 138.505 kb on - strand, within CA264_21370 at 138.602 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.604 kb on + strand, within CA264_21370 at 138.607 kb on + strand, within CA264_21370 at 138.644 kb on + strand, within CA264_21370 at 138.698 kb on + strand, within CA264_21370 at 138.704 kb on - strand, within CA264_21370 at 138.716 kb on + strand, within CA264_21370 at 138.757 kb on - strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.815 kb on + strand, within CA264_21370 at 138.816 kb on - strand, within CA264_21370 at 138.903 kb on + strand, within CA264_21370 at 138.915 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.935 kb on + strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.936 kb on - strand, within CA264_21370 at 138.938 kb on - strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.939 kb on + strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.940 kb on - strand, within CA264_21370 at 138.960 kb on - strand at 138.981 kb on + strand at 139.041 kb on - strand at 139.065 kb on - strand at 139.099 kb on - strand at 139.104 kb on - strand at 139.125 kb on + strand at 139.126 kb on - strand at 139.126 kb on - strand at 139.151 kb on + strand at 139.152 kb on - strand at 139.152 kb on - strand at 139.171 kb on + strand at 139.171 kb on + strand at 139.210 kb on - strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.215 kb on + strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.216 kb on - strand, within CA264_21375 at 139.236 kb on - strand, within CA264_21375 at 139.240 kb on - strand, within CA264_21375 at 139.285 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.288 kb on + strand, within CA264_21375 at 139.335 kb on + strand, within CA264_21375 at 139.336 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.338 kb on - strand, within CA264_21375 at 139.357 kb on - strand, within CA264_21375 at 139.384 kb on + strand, within CA264_21375 at 139.385 kb on - strand, within CA264_21375 at 139.393 kb on - strand, within CA264_21375 at 139.424 kb on + strand, within CA264_21375 at 139.448 kb on + strand, within CA264_21375 at 139.449 kb on - strand, within CA264_21375 at 139.484 kb on + strand, within CA264_21375 at 139.500 kb on + strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.501 kb on - strand, within CA264_21375 at 139.576 kb on - strand, within CA264_21375 at 139.635 kb on - strand at 139.818 kb on + strand, within CA264_21380 at 139.820 kb on + strand, within CA264_21380 at 139.822 kb on + strand, within CA264_21380 at 139.880 kb on + strand, within CA264_21380 at 140.062 kb on + strand, within CA264_21380 at 140.210 kb on + strand, within CA264_21380 at 140.314 kb on + strand, within CA264_21380 at 140.314 kb on + strand, within CA264_21380 at 140.418 kb on + strand, within CA264_21380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 138,200 + +0.2 138,201 - +0.5 138,201 - -0.5 138,201 - -0.1 138,220 + -0.3 138,237 - +0.0 138,268 - +0.3 138,273 + -0.2 138,281 - +0.1 138,281 - +0.1 138,311 - CA264_21370 0.13 -0.3 138,349 + CA264_21370 0.17 +0.0 138,350 - CA264_21370 0.17 -0.7 138,351 + CA264_21370 0.17 -0.3 138,355 + CA264_21370 0.18 +0.6 138,356 - CA264_21370 0.18 -0.7 138,396 - CA264_21370 0.23 -0.3 138,410 + CA264_21370 0.24 -0.2 138,410 + CA264_21370 0.24 -0.1 138,411 - CA264_21370 0.24 -0.9 138,411 - CA264_21370 0.24 -0.2 138,411 - CA264_21370 0.24 -1.0 138,411 - CA264_21370 0.24 -0.6 138,412 + CA264_21370 0.25 +2.0 138,505 - CA264_21370 0.36 +2.4 138,602 + CA264_21370 0.47 +0.2 138,604 + CA264_21370 0.48 -0.3 138,604 + CA264_21370 0.48 -0.6 138,607 + CA264_21370 0.48 +1.5 138,644 + CA264_21370 0.52 +0.4 138,698 + CA264_21370 0.59 -0.1 138,704 - CA264_21370 0.59 -0.0 138,716 + CA264_21370 0.61 +0.3 138,757 - CA264_21370 0.66 +0.9 138,815 + CA264_21370 0.73 +0.6 138,815 + CA264_21370 0.73 +0.5 138,816 - CA264_21370 0.73 -0.4 138,903 + CA264_21370 0.83 +0.5 138,915 + CA264_21370 0.85 -0.3 138,935 + CA264_21370 0.87 -0.5 138,935 + CA264_21370 0.87 +0.1 138,935 + CA264_21370 0.87 +0.2 138,936 - CA264_21370 0.87 -2.6 138,936 - CA264_21370 0.87 -0.7 138,938 - CA264_21370 0.87 +0.7 138,939 + CA264_21370 0.88 +0.5 138,939 + CA264_21370 0.88 +0.1 138,940 - CA264_21370 0.88 +0.4 138,940 - CA264_21370 0.88 -0.1 138,940 - CA264_21370 0.88 +0.3 138,940 - CA264_21370 0.88 +0.6 138,940 - CA264_21370 0.88 +0.1 138,940 - CA264_21370 0.88 +1.0 138,960 - -0.6 138,981 + -0.2 139,041 - +1.1 139,065 - -0.1 139,099 - +1.8 139,104 - -0.3 139,125 + +0.9 139,126 - -0.2 139,126 - -0.6 139,151 + +0.4 139,152 - +0.3 139,152 - +0.1 139,171 + -0.5 139,171 + +0.5 139,210 - CA264_21375 0.14 +2.6 139,215 + CA264_21375 0.15 +0.2 139,215 + CA264_21375 0.15 -0.2 139,216 - CA264_21375 0.16 -0.5 139,216 - CA264_21375 0.16 +0.6 139,236 - CA264_21375 0.20 -0.2 139,240 - CA264_21375 0.20 +0.1 139,285 + CA264_21375 0.29 +0.3 139,288 + CA264_21375 0.30 +0.0 139,288 + CA264_21375 0.30 +0.0 139,335 + CA264_21375 0.39 -0.1 139,336 - CA264_21375 0.39 -1.2 139,338 - CA264_21375 0.40 -0.5 139,338 - CA264_21375 0.40 +0.4 139,357 - CA264_21375 0.43 -0.1 139,384 + CA264_21375 0.49 -0.5 139,385 - CA264_21375 0.49 +0.3 139,393 - CA264_21375 0.50 +0.1 139,424 + CA264_21375 0.57 +0.2 139,448 + CA264_21375 0.61 +1.0 139,449 - CA264_21375 0.62 +0.3 139,484 + CA264_21375 0.68 +0.6 139,500 + CA264_21375 0.72 +1.2 139,501 - CA264_21375 0.72 -0.4 139,501 - CA264_21375 0.72 +0.2 139,501 - CA264_21375 0.72 +0.0 139,576 - CA264_21375 0.87 -1.3 139,635 - +0.3 139,818 + CA264_21380 0.13 -0.9 139,820 + CA264_21380 0.14 -1.5 139,822 + CA264_21380 0.14 -1.0 139,880 + CA264_21380 0.19 +0.8 140,062 + CA264_21380 0.33 -0.3 140,210 + CA264_21380 0.46 -0.0 140,314 + CA264_21380 0.54 +0.5 140,314 + CA264_21380 0.54 +0.2 140,418 + CA264_21380 0.63 -0.6
Or see this region's nucleotide sequence