Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_21260

Experiment: m.b. Chloride 750 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_21255 and CA264_21260 are separated by 105 nucleotidesCA264_21260 and CA264_21265 overlap by 40 nucleotides CA264_21255: CA264_21255 - hypothetical protein, at 114,749 to 115,135 _21255 CA264_21260: CA264_21260 - cation transporter, at 115,241 to 119,065 _21260 CA264_21265: CA264_21265 - hypothetical protein, at 119,026 to 120,348 _21265 Position (kb) 115 116 117 118 119 120Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 114.299 kb on + strandat 114.351 kb on + strandat 114.422 kb on + strandat 114.422 kb on + strandat 114.423 kb on - strandat 114.423 kb on - strandat 114.427 kb on - strandat 114.461 kb on + strandat 114.461 kb on + strandat 114.462 kb on - strandat 114.490 kb on + strandat 114.490 kb on + strandat 114.491 kb on - strandat 114.491 kb on - strandat 114.493 kb on + strandat 114.494 kb on - strandat 114.498 kb on - strandat 114.522 kb on + strandat 114.526 kb on + strandat 114.526 kb on + strandat 114.528 kb on + strandat 114.528 kb on + strandat 114.544 kb on + strandat 114.545 kb on - strandat 114.547 kb on - strandat 114.571 kb on + strandat 114.580 kb on + strandat 114.580 kb on + strandat 114.581 kb on - strandat 114.581 kb on - strandat 114.581 kb on - strandat 114.611 kb on + strandat 114.611 kb on + strandat 114.611 kb on + strandat 114.612 kb on - strandat 114.612 kb on - strandat 114.658 kb on - strandat 114.682 kb on + strandat 114.682 kb on + strandat 114.691 kb on + strandat 114.693 kb on + strandat 114.694 kb on - strandat 114.694 kb on - strandat 114.694 kb on - strandat 114.694 kb on - strandat 114.694 kb on - strandat 114.694 kb on - strandat 114.697 kb on + strandat 114.698 kb on - strandat 114.768 kb on + strandat 114.768 kb on + strandat 114.774 kb on + strandat 114.775 kb on - strandat 114.793 kb on + strand, within CA264_21255at 114.847 kb on + strand, within CA264_21255at 114.847 kb on + strand, within CA264_21255at 114.848 kb on - strand, within CA264_21255at 114.889 kb on + strand, within CA264_21255at 114.919 kb on + strand, within CA264_21255at 114.920 kb on - strand, within CA264_21255at 114.985 kb on + strand, within CA264_21255at 115.030 kb on + strand, within CA264_21255at 115.102 kb on + strandat 115.102 kb on + strandat 115.103 kb on - strandat 115.106 kb on + strandat 115.107 kb on - strandat 115.240 kb on + strandat 115.241 kb on - strandat 115.321 kb on + strandat 115.340 kb on - strandat 115.473 kb on - strandat 115.481 kb on - strandat 115.483 kb on + strandat 115.484 kb on - strandat 115.553 kb on + strandat 115.553 kb on + strandat 115.553 kb on + strandat 115.554 kb on - strandat 115.554 kb on - strandat 115.555 kb on + strandat 115.555 kb on + strandat 115.634 kb on - strand, within CA264_21260at 115.694 kb on + strand, within CA264_21260at 115.695 kb on - strand, within CA264_21260at 115.700 kb on + strand, within CA264_21260at 115.701 kb on - strand, within CA264_21260at 115.784 kb on + strand, within CA264_21260at 115.789 kb on + strand, within CA264_21260at 115.789 kb on + strand, within CA264_21260at 115.789 kb on + strand, within CA264_21260at 115.789 kb on + strand, within CA264_21260at 115.789 kb on + strand, within CA264_21260at 115.790 kb on - strand, within CA264_21260at 115.794 kb on - strand, within CA264_21260at 115.794 kb on - strand, within CA264_21260at 115.894 kb on + strand, within CA264_21260at 115.982 kb on + strand, within CA264_21260at 116.202 kb on + strand, within CA264_21260at 116.202 kb on + strand, within CA264_21260at 116.223 kb on + strand, within CA264_21260at 116.223 kb on + strand, within CA264_21260at 116.223 kb on + strand, within CA264_21260at 116.223 kb on + strand, within CA264_21260at 116.224 kb on - strand, within CA264_21260at 116.261 kb on - strand, within CA264_21260at 116.291 kb on + strand, within CA264_21260at 116.291 kb on + strand, within CA264_21260at 116.291 kb on + strand, within CA264_21260at 116.322 kb on + strand, within CA264_21260at 116.344 kb on + strand, within CA264_21260at 116.529 kb on + strand, within CA264_21260at 116.530 kb on - strand, within CA264_21260at 116.535 kb on + strand, within CA264_21260at 116.536 kb on - strand, within CA264_21260at 116.610 kb on + strand, within CA264_21260at 116.623 kb on + strand, within CA264_21260at 116.624 kb on - strand, within CA264_21260at 116.627 kb on - strand, within CA264_21260at 116.629 kb on - strand, within CA264_21260at 116.713 kb on + strand, within CA264_21260at 116.713 kb on + strand, within CA264_21260at 116.869 kb on + strand, within CA264_21260at 116.869 kb on + strand, within CA264_21260at 116.869 kb on + strand, within CA264_21260at 116.884 kb on - strand, within CA264_21260at 116.917 kb on - strand, within CA264_21260at 116.931 kb on + strand, within CA264_21260at 116.932 kb on - strand, within CA264_21260at 116.976 kb on - strand, within CA264_21260at 116.985 kb on - strand, within CA264_21260at 116.989 kb on + strand, within CA264_21260at 116.990 kb on - strand, within CA264_21260at 116.994 kb on + strand, within CA264_21260at 116.995 kb on - strand, within CA264_21260at 116.995 kb on - strand, within CA264_21260at 117.065 kb on + strand, within CA264_21260at 117.065 kb on + strand, within CA264_21260at 117.066 kb on - strand, within CA264_21260at 117.066 kb on - strand, within CA264_21260at 117.140 kb on + strand, within CA264_21260at 117.140 kb on + strand, within CA264_21260at 117.141 kb on - strand, within CA264_21260at 117.141 kb on - strand, within CA264_21260at 117.141 kb on - strand, within CA264_21260at 117.173 kb on - strand, within CA264_21260at 117.208 kb on - strand, within CA264_21260at 117.208 kb on - strand, within CA264_21260at 117.557 kb on + strand, within CA264_21260at 117.557 kb on + strand, within CA264_21260at 117.557 kb on + strand, within CA264_21260at 117.570 kb on - strand, within CA264_21260at 117.627 kb on - strand, within CA264_21260at 117.627 kb on - strand, within CA264_21260at 117.629 kb on - strand, within CA264_21260at 117.649 kb on - strand, within CA264_21260at 117.841 kb on + strand, within CA264_21260at 117.841 kb on + strand, within CA264_21260at 117.844 kb on + strand, within CA264_21260at 117.845 kb on - strand, within CA264_21260at 117.845 kb on - strand, within CA264_21260at 117.845 kb on - strand, within CA264_21260at 117.919 kb on - strand, within CA264_21260at 118.032 kb on + strand, within CA264_21260at 118.033 kb on - strand, within CA264_21260at 118.112 kb on - strand, within CA264_21260at 118.171 kb on + strand, within CA264_21260at 118.204 kb on + strand, within CA264_21260at 118.205 kb on - strand, within CA264_21260at 118.249 kb on - strand, within CA264_21260at 118.249 kb on - strand, within CA264_21260at 118.253 kb on + strand, within CA264_21260at 118.288 kb on + strand, within CA264_21260at 118.293 kb on - strand, within CA264_21260at 118.293 kb on - strand, within CA264_21260at 118.416 kb on + strand, within CA264_21260at 118.421 kb on + strand, within CA264_21260at 118.422 kb on - strandat 118.422 kb on - strand, within CA264_21260at 118.422 kb on - strand, within CA264_21260at 118.422 kb on - strand, within CA264_21260at 118.422 kb on - strand, within CA264_21260at 118.452 kb on + strand, within CA264_21260at 118.490 kb on - strand, within CA264_21260at 118.513 kb on - strand, within CA264_21260at 118.518 kb on - strand, within CA264_21260at 118.537 kb on - strand, within CA264_21260at 118.592 kb on - strand, within CA264_21260at 118.652 kb on - strand, within CA264_21260at 118.729 kb on - strandat 118.808 kb on - strandat 119.003 kb on + strandat 119.079 kb on + strandat 119.080 kb on - strandat 119.221 kb on + strand, within CA264_21265at 119.222 kb on - strand, within CA264_21265at 119.471 kb on - strand, within CA264_21265at 119.471 kb on - strand, within CA264_21265at 119.483 kb on - strand, within CA264_21265at 119.486 kb on - strand, within CA264_21265at 119.560 kb on + strand, within CA264_21265at 119.624 kb on + strand, within CA264_21265at 119.625 kb on - strand, within CA264_21265at 119.625 kb on - strand, within CA264_21265at 119.636 kb on + strand, within CA264_21265at 119.878 kb on - strand, within CA264_21265at 119.883 kb on - strand, within CA264_21265at 119.893 kb on + strand, within CA264_21265at 119.894 kb on - strand, within CA264_21265at 119.998 kb on + strand, within CA264_21265

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM
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114,299 + -2.6
114,351 + -0.4
114,422 + -2.8
114,422 + -0.0
114,423 - +0.2
114,423 - +0.3
114,427 - -1.5
114,461 + -0.3
114,461 + +1.0
114,462 - +0.4
114,490 + -0.3
114,490 + -1.6
114,491 - -1.1
114,491 - -1.4
114,493 + -1.0
114,494 - -1.4
114,498 - -1.3
114,522 + -0.1
114,526 + -0.5
114,526 + +0.2
114,528 + -1.8
114,528 + -0.1
114,544 + -0.9
114,545 - -0.8
114,547 - +0.7
114,571 + +1.3
114,580 + +0.5
114,580 + +0.0
114,581 - +0.4
114,581 - -1.1
114,581 - +1.0
114,611 + +1.5
114,611 + -0.1
114,611 + +2.2
114,612 - -0.5
114,612 - -1.0
114,658 - +1.1
114,682 + -0.3
114,682 + -0.3
114,691 + +0.4
114,693 + -0.8
114,694 - +0.4
114,694 - -0.8
114,694 - -0.7
114,694 - +1.3
114,694 - -0.4
114,694 - -0.2
114,697 + -0.2
114,698 - +1.6
114,768 + -0.1
114,768 + -0.3
114,774 + +1.1
114,775 - +0.2
114,793 + CA264_21255 0.11 -0.0
114,847 + CA264_21255 0.25 -0.6
114,847 + CA264_21255 0.25 +0.4
114,848 - CA264_21255 0.26 +0.3
114,889 + CA264_21255 0.36 -0.1
114,919 + CA264_21255 0.44 +0.5
114,920 - CA264_21255 0.44 -0.6
114,985 + CA264_21255 0.61 +0.5
115,030 + CA264_21255 0.73 +0.3
115,102 + -0.1
115,102 + -1.4
115,103 - +0.4
115,106 + -0.3
115,107 - -1.4
115,240 + -1.6
115,241 - -0.5
115,321 + -1.2
115,340 - +0.2
115,473 - -1.0
115,481 - -1.0
115,483 + +0.3
115,484 - +0.6
115,553 + +0.9
115,553 + -0.8
115,553 + -0.1
115,554 - +0.6
115,554 - -2.8
115,555 + -0.8
115,555 + +0.4
115,634 - CA264_21260 0.10 -0.3
115,694 + CA264_21260 0.12 -1.5
115,695 - CA264_21260 0.12 -0.5
115,700 + CA264_21260 0.12 -0.1
115,701 - CA264_21260 0.12 +0.2
115,784 + CA264_21260 0.14 -0.2
115,789 + CA264_21260 0.14 -0.9
115,789 + CA264_21260 0.14 -1.3
115,789 + CA264_21260 0.14 -0.6
115,789 + CA264_21260 0.14 -2.5
115,789 + CA264_21260 0.14 -2.4
115,790 - CA264_21260 0.14 -1.4
115,794 - CA264_21260 0.14 +0.7
115,794 - CA264_21260 0.14 +1.0
115,894 + CA264_21260 0.17 +0.4
115,982 + CA264_21260 0.19 -1.8
116,202 + CA264_21260 0.25 -0.7
116,202 + CA264_21260 0.25 -0.8
116,223 + CA264_21260 0.26 -0.5
116,223 + CA264_21260 0.26 -1.6
116,223 + CA264_21260 0.26 -0.9
116,223 + CA264_21260 0.26 -1.5
116,224 - CA264_21260 0.26 -1.0
116,261 - CA264_21260 0.27 -0.7
116,291 + CA264_21260 0.27 +0.4
116,291 + CA264_21260 0.27 -1.0
116,291 + CA264_21260 0.27 +0.1
116,322 + CA264_21260 0.28 -0.7
116,344 + CA264_21260 0.29 -1.3
116,529 + CA264_21260 0.34 -1.9
116,530 - CA264_21260 0.34 -0.0
116,535 + CA264_21260 0.34 +0.4
116,536 - CA264_21260 0.34 -0.7
116,610 + CA264_21260 0.36 -1.3
116,623 + CA264_21260 0.36 -0.5
116,624 - CA264_21260 0.36 -0.9
116,627 - CA264_21260 0.36 +1.2
116,629 - CA264_21260 0.36 +0.2
116,713 + CA264_21260 0.38 -1.8
116,713 + CA264_21260 0.38 -1.7
116,869 + CA264_21260 0.43 -1.6
116,869 + CA264_21260 0.43 -0.7
116,869 + CA264_21260 0.43 -2.5
116,884 - CA264_21260 0.43 -0.2
116,917 - CA264_21260 0.44 -0.9
116,931 + CA264_21260 0.44 -2.7
116,932 - CA264_21260 0.44 -0.5
116,976 - CA264_21260 0.45 +1.3
116,985 - CA264_21260 0.46 -0.5
116,989 + CA264_21260 0.46 -0.4
116,990 - CA264_21260 0.46 -0.6
116,994 + CA264_21260 0.46 -1.0
116,995 - CA264_21260 0.46 -0.3
116,995 - CA264_21260 0.46 -0.9
117,065 + CA264_21260 0.48 -0.9
117,065 + CA264_21260 0.48 -0.5
117,066 - CA264_21260 0.48 -0.1
117,066 - CA264_21260 0.48 -0.6
117,140 + CA264_21260 0.50 -1.5
117,140 + CA264_21260 0.50 -3.4
117,141 - CA264_21260 0.50 -0.3
117,141 - CA264_21260 0.50 +1.0
117,141 - CA264_21260 0.50 -0.9
117,173 - CA264_21260 0.51 +0.1
117,208 - CA264_21260 0.51 -2.0
117,208 - CA264_21260 0.51 -0.6
117,557 + CA264_21260 0.61 -1.8
117,557 + CA264_21260 0.61 -1.3
117,557 + CA264_21260 0.61 -0.6
117,570 - CA264_21260 0.61 -0.8
117,627 - CA264_21260 0.62 -0.6
117,627 - CA264_21260 0.62 -0.7
117,629 - CA264_21260 0.62 -0.3
117,649 - CA264_21260 0.63 -0.6
117,841 + CA264_21260 0.68 -1.2
117,841 + CA264_21260 0.68 -1.1
117,844 + CA264_21260 0.68 -1.1
117,845 - CA264_21260 0.68 -0.9
117,845 - CA264_21260 0.68 -0.6
117,845 - CA264_21260 0.68 -0.4
117,919 - CA264_21260 0.70 -1.3
118,032 + CA264_21260 0.73 -1.5
118,033 - CA264_21260 0.73 -1.1
118,112 - CA264_21260 0.75 -0.1
118,171 + CA264_21260 0.77 -2.6
118,204 + CA264_21260 0.77 -1.7
118,205 - CA264_21260 0.77 -1.1
118,249 - CA264_21260 0.79 -1.3
118,249 - CA264_21260 0.79 -1.2
118,253 + CA264_21260 0.79 -2.8
118,288 + CA264_21260 0.80 -1.6
118,293 - CA264_21260 0.80 -0.2
118,293 - CA264_21260 0.80 -0.3
118,416 + CA264_21260 0.83 -0.8
118,421 + CA264_21260 0.83 +1.0
118,422 - +2.3
118,422 - CA264_21260 0.83 -0.2
118,422 - CA264_21260 0.83 +0.6
118,422 - CA264_21260 0.83 +0.6
118,422 - CA264_21260 0.83 -0.4
118,452 + CA264_21260 0.84 -0.7
118,490 - CA264_21260 0.85 -1.8
118,513 - CA264_21260 0.86 +0.4
118,518 - CA264_21260 0.86 -2.4
118,537 - CA264_21260 0.86 -1.1
118,592 - CA264_21260 0.88 +1.0
118,652 - CA264_21260 0.89 +0.2
118,729 - +1.3
118,808 - -0.1
119,003 + -1.1
119,079 + -2.7
119,080 - -0.2
119,221 + CA264_21265 0.15 -2.3
119,222 - CA264_21265 0.15 +0.4
119,471 - CA264_21265 0.34 -0.5
119,471 - CA264_21265 0.34 +0.0
119,483 - CA264_21265 0.35 -2.3
119,486 - CA264_21265 0.35 -1.4
119,560 + CA264_21265 0.40 -2.9
119,624 + CA264_21265 0.45 -0.6
119,625 - CA264_21265 0.45 -2.1
119,625 - CA264_21265 0.45 -1.3
119,636 + CA264_21265 0.46 -1.4
119,878 - CA264_21265 0.64 -0.2
119,883 - CA264_21265 0.65 -2.4
119,893 + CA264_21265 0.66 -1.8
119,894 - CA264_21265 0.66 -1.4
119,998 + CA264_21265 0.73 +0.0

Or see this region's nucleotide sequence