Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20690 and CA264_20695 are separated by 74 nucleotides CA264_20695 and CA264_20700 are separated by 90 nucleotides CA264_20700 and CA264_20705 are separated by 118 nucleotides
CA264_20690: CA264_20690 - methylmalonyl-CoA mutase, at 4,762,733 to 4,764,877
_20690
CA264_20695: CA264_20695 - methylmalonyl-CoA mutase, at 4,764,952 to 4,766,796
_20695
CA264_20700: CA264_20700 - hypothetical protein, at 4,766,887 to 4,767,267
_20700
CA264_20705: CA264_20705 - N-acyl-L-amino acid amidohydrolase, at 4,767,386 to 4,768,720
_20705
Position (kb)
4764
4765
4766
4767 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4763.971 kb on + strand, within CA264_20690 at 4763.971 kb on + strand, within CA264_20690 at 4763.972 kb on - strand, within CA264_20690 at 4764.019 kb on + strand, within CA264_20690 at 4764.037 kb on + strand, within CA264_20690 at 4764.038 kb on - strand, within CA264_20690 at 4764.108 kb on + strand, within CA264_20690 at 4764.130 kb on + strand, within CA264_20690 at 4764.131 kb on - strand, within CA264_20690 at 4764.132 kb on + strand, within CA264_20690 at 4764.132 kb on + strand, within CA264_20690 at 4764.155 kb on - strand, within CA264_20690 at 4764.224 kb on - strand, within CA264_20690 at 4764.276 kb on + strand, within CA264_20690 at 4764.277 kb on - strand, within CA264_20690 at 4764.292 kb on + strand, within CA264_20690 at 4764.307 kb on + strand, within CA264_20690 at 4764.308 kb on - strand, within CA264_20690 at 4764.330 kb on - strand, within CA264_20690 at 4764.386 kb on - strand, within CA264_20690 at 4764.497 kb on + strand, within CA264_20690 at 4764.610 kb on + strand, within CA264_20690 at 4764.639 kb on + strand, within CA264_20690 at 4764.669 kb on + strand at 4764.669 kb on + strand at 4764.670 kb on - strand at 4764.670 kb on - strand at 4764.696 kb on + strand at 4764.697 kb on - strand at 4764.697 kb on - strand at 4764.840 kb on - strand at 4764.848 kb on + strand at 4764.848 kb on + strand at 4764.849 kb on - strand at 4764.849 kb on - strand at 4764.849 kb on - strand at 4764.850 kb on + strand at 4764.854 kb on + strand at 4764.855 kb on - strand at 4764.855 kb on - strand at 4764.891 kb on + strand at 4764.923 kb on - strand at 4764.923 kb on - strand at 4764.934 kb on + strand at 4764.960 kb on + strand at 4765.093 kb on + strand at 4765.093 kb on + strand at 4765.093 kb on + strand at 4765.094 kb on - strand at 4765.094 kb on - strand at 4765.094 kb on - strand at 4765.146 kb on + strand, within CA264_20695 at 4765.147 kb on - strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.149 kb on - strand, within CA264_20695 at 4765.194 kb on + strand, within CA264_20695 at 4765.197 kb on + strand, within CA264_20695 at 4765.197 kb on + strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.227 kb on + strand, within CA264_20695 at 4765.227 kb on + strand, within CA264_20695 at 4765.228 kb on - strand, within CA264_20695 at 4765.291 kb on + strand, within CA264_20695 at 4765.292 kb on - strand, within CA264_20695 at 4765.318 kb on - strand, within CA264_20695 at 4765.318 kb on - strand, within CA264_20695 at 4765.324 kb on + strand, within CA264_20695 at 4765.324 kb on + strand, within CA264_20695 at 4765.398 kb on - strand, within CA264_20695 at 4765.432 kb on + strand, within CA264_20695 at 4765.432 kb on + strand, within CA264_20695 at 4765.434 kb on + strand, within CA264_20695 at 4765.435 kb on - strand, within CA264_20695 at 4765.562 kb on - strand, within CA264_20695 at 4765.577 kb on + strand, within CA264_20695 at 4765.578 kb on - strand, within CA264_20695 at 4765.578 kb on - strand, within CA264_20695 at 4765.665 kb on - strand, within CA264_20695 at 4765.688 kb on - strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.700 kb on - strand, within CA264_20695 at 4765.700 kb on - strand, within CA264_20695 at 4765.703 kb on + strand, within CA264_20695 at 4765.704 kb on - strand, within CA264_20695 at 4765.896 kb on + strand, within CA264_20695 at 4765.951 kb on + strand, within CA264_20695 at 4765.952 kb on - strand, within CA264_20695 at 4765.952 kb on - strand, within CA264_20695 at 4766.006 kb on + strand, within CA264_20695 at 4766.006 kb on + strand, within CA264_20695 at 4766.007 kb on - strand, within CA264_20695 at 4766.083 kb on - strand, within CA264_20695 at 4766.086 kb on + strand, within CA264_20695 at 4766.091 kb on - strand, within CA264_20695 at 4766.091 kb on - strand, within CA264_20695 at 4766.108 kb on - strand, within CA264_20695 at 4766.114 kb on + strand, within CA264_20695 at 4766.114 kb on + strand, within CA264_20695 at 4766.167 kb on + strand, within CA264_20695 at 4766.219 kb on - strand, within CA264_20695 at 4766.331 kb on - strand, within CA264_20695 at 4766.370 kb on + strand, within CA264_20695 at 4766.371 kb on - strand, within CA264_20695 at 4766.371 kb on - strand, within CA264_20695 at 4766.373 kb on - strand, within CA264_20695 at 4766.373 kb on - strand, within CA264_20695 at 4766.382 kb on + strand, within CA264_20695 at 4766.408 kb on - strand, within CA264_20695 at 4766.536 kb on + strand, within CA264_20695 at 4766.537 kb on - strand, within CA264_20695 at 4766.537 kb on - strand, within CA264_20695 at 4766.606 kb on - strand, within CA264_20695 at 4766.651 kb on - strand at 4766.666 kb on + strand at 4766.666 kb on + strand at 4766.666 kb on + strand at 4766.667 kb on - strand at 4766.667 kb on - strand at 4766.679 kb on + strand at 4766.680 kb on - strand at 4766.680 kb on - strand at 4766.834 kb on + strand at 4766.835 kb on - strand at 4766.835 kb on - strand at 4766.835 kb on - strand at 4766.836 kb on + strand at 4766.837 kb on - strand at 4766.841 kb on + strand at 4766.848 kb on + strand at 4766.866 kb on - strand at 4766.868 kb on - strand at 4766.881 kb on + strand at 4766.941 kb on + strand, within CA264_20700 at 4766.942 kb on - strand, within CA264_20700 at 4766.944 kb on + strand, within CA264_20700 at 4766.944 kb on + strand, within CA264_20700 at 4766.945 kb on - strand, within CA264_20700 at 4766.946 kb on + strand, within CA264_20700 at 4766.946 kb on + strand, within CA264_20700 at 4766.947 kb on - strand, within CA264_20700 at 4767.015 kb on - strand, within CA264_20700 at 4767.097 kb on + strand, within CA264_20700 at 4767.098 kb on - strand, within CA264_20700 at 4767.098 kb on - strand, within CA264_20700 at 4767.100 kb on - strand, within CA264_20700 at 4767.109 kb on - strand, within CA264_20700 at 4767.153 kb on + strand, within CA264_20700 at 4767.161 kb on - strand, within CA264_20700 at 4767.210 kb on - strand, within CA264_20700 at 4767.210 kb on - strand, within CA264_20700 at 4767.210 kb on - strand, within CA264_20700 at 4767.210 kb on - strand, within CA264_20700 at 4767.216 kb on + strand, within CA264_20700 at 4767.216 kb on + strand, within CA264_20700 at 4767.217 kb on - strand, within CA264_20700 at 4767.218 kb on + strand, within CA264_20700 at 4767.222 kb on + strand, within CA264_20700 at 4767.270 kb on + strand at 4767.270 kb on + strand at 4767.270 kb on + strand at 4767.287 kb on - strand at 4767.287 kb on - strand at 4767.347 kb on + strand at 4767.348 kb on - strand at 4767.421 kb on - strand at 4767.439 kb on + strand at 4767.447 kb on + strand at 4767.448 kb on - strand at 4767.460 kb on + strand at 4767.460 kb on + strand at 4767.462 kb on + strand at 4767.463 kb on - strand at 4767.472 kb on + strand at 4767.481 kb on - strand at 4767.631 kb on - strand, within CA264_20705 at 4767.646 kb on + strand, within CA264_20705 at 4767.647 kb on - strand, within CA264_20705 at 4767.658 kb on - strand, within CA264_20705 at 4767.658 kb on - strand, within CA264_20705 at 4767.660 kb on + strand, within CA264_20705 at 4767.666 kb on + strand, within CA264_20705 at 4767.667 kb on - strand, within CA264_20705 at 4767.670 kb on + strand, within CA264_20705 at 4767.702 kb on + strand, within CA264_20705 at 4767.703 kb on - strand, within CA264_20705 at 4767.703 kb on - strand, within CA264_20705 at 4767.745 kb on + strand, within CA264_20705 at 4767.747 kb on + strand, within CA264_20705 at 4767.748 kb on - strand, within CA264_20705 at 4767.748 kb on - strand, within CA264_20705
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,763,971 + CA264_20690 0.58 -0.4 4,763,971 + CA264_20690 0.58 -0.5 4,763,972 - CA264_20690 0.58 +0.5 4,764,019 + CA264_20690 0.60 +0.0 4,764,037 + CA264_20690 0.61 +1.1 4,764,038 - CA264_20690 0.61 -0.1 4,764,108 + CA264_20690 0.64 -0.1 4,764,130 + CA264_20690 0.65 -0.3 4,764,131 - CA264_20690 0.65 +2.1 4,764,132 + CA264_20690 0.65 -0.2 4,764,132 + CA264_20690 0.65 -0.0 4,764,155 - CA264_20690 0.66 -0.4 4,764,224 - CA264_20690 0.70 -0.1 4,764,276 + CA264_20690 0.72 -0.1 4,764,277 - CA264_20690 0.72 -0.7 4,764,292 + CA264_20690 0.73 -0.8 4,764,307 + CA264_20690 0.73 -0.4 4,764,308 - CA264_20690 0.73 -0.2 4,764,330 - CA264_20690 0.74 -0.4 4,764,386 - CA264_20690 0.77 +0.6 4,764,497 + CA264_20690 0.82 +0.4 4,764,610 + CA264_20690 0.88 +0.1 4,764,639 + CA264_20690 0.89 -0.1 4,764,669 + -0.1 4,764,669 + -0.3 4,764,670 - +0.7 4,764,670 - -0.6 4,764,696 + +0.3 4,764,697 - +1.4 4,764,697 - +0.1 4,764,840 - -0.9 4,764,848 + -0.3 4,764,848 + -0.1 4,764,849 - -0.8 4,764,849 - +0.2 4,764,849 - -0.5 4,764,850 + -0.5 4,764,854 + -0.1 4,764,855 - -0.0 4,764,855 - +0.1 4,764,891 + -0.3 4,764,923 - -0.4 4,764,923 - +0.4 4,764,934 + -1.1 4,764,960 + -0.9 4,765,093 + -1.9 4,765,093 + +0.4 4,765,093 + +0.0 4,765,094 - -1.1 4,765,094 - -0.4 4,765,094 - +1.9 4,765,146 + CA264_20695 0.11 +0.2 4,765,147 - CA264_20695 0.11 +0.6 4,765,148 + CA264_20695 0.11 +0.4 4,765,148 + CA264_20695 0.11 +0.4 4,765,148 + CA264_20695 0.11 +0.3 4,765,149 - CA264_20695 0.11 -0.1 4,765,194 + CA264_20695 0.13 -1.1 4,765,197 + CA264_20695 0.13 -0.7 4,765,197 + CA264_20695 0.13 -1.4 4,765,198 - CA264_20695 0.13 -1.3 4,765,198 - CA264_20695 0.13 -1.5 4,765,198 - CA264_20695 0.13 -1.1 4,765,227 + CA264_20695 0.15 -0.2 4,765,227 + CA264_20695 0.15 +0.3 4,765,228 - CA264_20695 0.15 +0.2 4,765,291 + CA264_20695 0.18 +0.2 4,765,292 - CA264_20695 0.18 +0.2 4,765,318 - CA264_20695 0.20 -0.7 4,765,318 - CA264_20695 0.20 +0.2 4,765,324 + CA264_20695 0.20 +0.3 4,765,324 + CA264_20695 0.20 -0.6 4,765,398 - CA264_20695 0.24 -0.8 4,765,432 + CA264_20695 0.26 +0.1 4,765,432 + CA264_20695 0.26 -0.4 4,765,434 + CA264_20695 0.26 +0.6 4,765,435 - CA264_20695 0.26 -1.1 4,765,562 - CA264_20695 0.33 +0.5 4,765,577 + CA264_20695 0.34 +0.5 4,765,578 - CA264_20695 0.34 +0.1 4,765,578 - CA264_20695 0.34 +0.4 4,765,665 - CA264_20695 0.39 -0.1 4,765,688 - CA264_20695 0.40 +0.1 4,765,699 + CA264_20695 0.40 -1.5 4,765,699 + CA264_20695 0.40 -0.1 4,765,699 + CA264_20695 0.40 +0.6 4,765,699 + CA264_20695 0.40 -0.9 4,765,700 - CA264_20695 0.41 +0.0 4,765,700 - CA264_20695 0.41 -0.7 4,765,703 + CA264_20695 0.41 +0.3 4,765,704 - CA264_20695 0.41 +0.2 4,765,896 + CA264_20695 0.51 -0.6 4,765,951 + CA264_20695 0.54 -0.2 4,765,952 - CA264_20695 0.54 -0.5 4,765,952 - CA264_20695 0.54 -0.4 4,766,006 + CA264_20695 0.57 -0.5 4,766,006 + CA264_20695 0.57 -0.2 4,766,007 - CA264_20695 0.57 -0.6 4,766,083 - CA264_20695 0.61 -0.4 4,766,086 + CA264_20695 0.61 -0.3 4,766,091 - CA264_20695 0.62 +0.1 4,766,091 - CA264_20695 0.62 -0.4 4,766,108 - CA264_20695 0.63 -2.1 4,766,114 + CA264_20695 0.63 -0.6 4,766,114 + CA264_20695 0.63 +0.9 4,766,167 + CA264_20695 0.66 -0.7 4,766,219 - CA264_20695 0.69 +1.7 4,766,331 - CA264_20695 0.75 -0.3 4,766,370 + CA264_20695 0.77 -0.0 4,766,371 - CA264_20695 0.77 -1.0 4,766,371 - CA264_20695 0.77 -2.4 4,766,373 - CA264_20695 0.77 -0.4 4,766,373 - CA264_20695 0.77 +0.3 4,766,382 + CA264_20695 0.78 -1.5 4,766,408 - CA264_20695 0.79 -1.2 4,766,536 + CA264_20695 0.86 -1.3 4,766,537 - CA264_20695 0.86 +0.3 4,766,537 - CA264_20695 0.86 -0.4 4,766,606 - CA264_20695 0.90 -1.6 4,766,651 - -1.1 4,766,666 + +0.6 4,766,666 + +0.3 4,766,666 + -1.1 4,766,667 - +0.2 4,766,667 - -1.0 4,766,679 + -0.2 4,766,680 - -0.4 4,766,680 - -0.8 4,766,834 + -1.5 4,766,835 - -0.5 4,766,835 - +0.6 4,766,835 - -0.4 4,766,836 + -0.2 4,766,837 - -0.5 4,766,841 + -0.1 4,766,848 + -1.1 4,766,866 - -0.2 4,766,868 - -0.2 4,766,881 + +0.7 4,766,941 + CA264_20700 0.14 -0.7 4,766,942 - CA264_20700 0.14 -0.5 4,766,944 + CA264_20700 0.15 -0.5 4,766,944 + CA264_20700 0.15 -0.3 4,766,945 - CA264_20700 0.15 -0.3 4,766,946 + CA264_20700 0.15 +0.4 4,766,946 + CA264_20700 0.15 -0.1 4,766,947 - CA264_20700 0.16 -0.6 4,767,015 - CA264_20700 0.34 -0.4 4,767,097 + CA264_20700 0.55 -1.3 4,767,098 - CA264_20700 0.55 -0.8 4,767,098 - CA264_20700 0.55 -0.3 4,767,100 - CA264_20700 0.56 -0.0 4,767,109 - CA264_20700 0.58 +0.8 4,767,153 + CA264_20700 0.70 -0.8 4,767,161 - CA264_20700 0.72 -0.3 4,767,210 - CA264_20700 0.85 -0.5 4,767,210 - CA264_20700 0.85 -0.6 4,767,210 - CA264_20700 0.85 +0.9 4,767,210 - CA264_20700 0.85 +1.6 4,767,216 + CA264_20700 0.86 -1.0 4,767,216 + CA264_20700 0.86 -1.3 4,767,217 - CA264_20700 0.87 -0.2 4,767,218 + CA264_20700 0.87 -1.8 4,767,222 + CA264_20700 0.88 -0.9 4,767,270 + -1.1 4,767,270 + -2.3 4,767,270 + -1.6 4,767,287 - -0.1 4,767,287 - -1.7 4,767,347 + +2.0 4,767,348 - -1.1 4,767,421 - +0.2 4,767,439 + -0.1 4,767,447 + +0.9 4,767,448 - -0.3 4,767,460 + -0.0 4,767,460 + -0.1 4,767,462 + -0.3 4,767,463 - +0.5 4,767,472 + +0.2 4,767,481 - -0.9 4,767,631 - CA264_20705 0.18 -1.4 4,767,646 + CA264_20705 0.19 -0.4 4,767,647 - CA264_20705 0.20 +0.5 4,767,658 - CA264_20705 0.20 -0.4 4,767,658 - CA264_20705 0.20 -0.3 4,767,660 + CA264_20705 0.21 -0.3 4,767,666 + CA264_20705 0.21 +0.3 4,767,667 - CA264_20705 0.21 -1.8 4,767,670 + CA264_20705 0.21 +1.4 4,767,702 + CA264_20705 0.24 -0.3 4,767,703 - CA264_20705 0.24 -0.3 4,767,703 - CA264_20705 0.24 +0.3 4,767,745 + CA264_20705 0.27 -0.5 4,767,747 + CA264_20705 0.27 +0.0 4,767,748 - CA264_20705 0.27 -0.4 4,767,748 - CA264_20705 0.27 -0.6
Or see this region's nucleotide sequence