Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20680 and CA264_20685 are separated by 138 nucleotides CA264_20685 and CA264_20690 are separated by 218 nucleotides CA264_20690 and CA264_20695 are separated by 74 nucleotides
CA264_20680: CA264_20680 - hypothetical protein, at 4,761,438 to 4,761,833
_20680
CA264_20685: CA264_20685 - transposase, at 4,761,972 to 4,762,514
_20685
CA264_20690: CA264_20690 - methylmalonyl-CoA mutase, at 4,762,733 to 4,764,877
_20690
CA264_20695: CA264_20695 - methylmalonyl-CoA mutase, at 4,764,952 to 4,766,796
_20695
Position (kb)
4762
4763
4764
4765 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4761.751 kb on - strand, within CA264_20680 at 4761.799 kb on - strand at 4761.826 kb on - strand at 4761.826 kb on - strand at 4761.826 kb on - strand at 4761.844 kb on - strand at 4761.844 kb on - strand at 4761.851 kb on + strand at 4761.859 kb on + strand at 4761.921 kb on + strand at 4761.922 kb on - strand at 4761.922 kb on - strand at 4761.922 kb on - strand at 4761.966 kb on - strand at 4761.974 kb on - strand at 4761.986 kb on + strand at 4761.987 kb on - strand at 4762.129 kb on - strand, within CA264_20685 at 4762.129 kb on - strand, within CA264_20685 at 4762.160 kb on + strand, within CA264_20685 at 4762.161 kb on - strand, within CA264_20685 at 4762.181 kb on + strand, within CA264_20685 at 4762.203 kb on + strand, within CA264_20685 at 4762.203 kb on + strand, within CA264_20685 at 4762.258 kb on + strand, within CA264_20685 at 4762.259 kb on - strand, within CA264_20685 at 4762.261 kb on - strand, within CA264_20685 at 4762.296 kb on - strand, within CA264_20685 at 4762.360 kb on + strand, within CA264_20685 at 4762.361 kb on - strand, within CA264_20685 at 4762.368 kb on + strand, within CA264_20685 at 4762.390 kb on + strand, within CA264_20685 at 4762.437 kb on + strand, within CA264_20685 at 4762.467 kb on - strand at 4762.475 kb on - strand at 4762.502 kb on - strand at 4762.516 kb on + strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.517 kb on - strand at 4762.521 kb on - strand at 4762.541 kb on - strand at 4762.541 kb on - strand at 4762.542 kb on + strand at 4762.542 kb on + strand at 4762.543 kb on - strand at 4762.582 kb on + strand at 4762.640 kb on - strand at 4762.641 kb on + strand at 4762.641 kb on + strand at 4762.680 kb on + strand at 4762.681 kb on - strand at 4762.869 kb on - strand at 4762.875 kb on - strand at 4762.877 kb on + strand at 4762.877 kb on + strand at 4762.877 kb on + strand at 4762.878 kb on - strand at 4762.878 kb on - strand at 4762.896 kb on - strand at 4763.001 kb on - strand, within CA264_20690 at 4763.032 kb on + strand, within CA264_20690 at 4763.162 kb on + strand, within CA264_20690 at 4763.212 kb on - strand, within CA264_20690 at 4763.223 kb on - strand, within CA264_20690 at 4763.253 kb on + strand, within CA264_20690 at 4763.254 kb on - strand, within CA264_20690 at 4763.256 kb on - strand, within CA264_20690 at 4763.256 kb on - strand, within CA264_20690 at 4763.256 kb on - strand, within CA264_20690 at 4763.290 kb on + strand, within CA264_20690 at 4763.291 kb on - strand, within CA264_20690 at 4763.291 kb on - strand, within CA264_20690 at 4763.337 kb on - strand, within CA264_20690 at 4763.409 kb on - strand, within CA264_20690 at 4763.410 kb on + strand, within CA264_20690 at 4763.449 kb on + strand, within CA264_20690 at 4763.497 kb on - strand, within CA264_20690 at 4763.497 kb on - strand, within CA264_20690 at 4763.515 kb on + strand, within CA264_20690 at 4763.515 kb on + strand, within CA264_20690 at 4763.516 kb on - strand, within CA264_20690 at 4763.625 kb on - strand, within CA264_20690 at 4763.678 kb on + strand, within CA264_20690 at 4763.679 kb on - strand, within CA264_20690 at 4763.682 kb on + strand, within CA264_20690 at 4763.682 kb on + strand, within CA264_20690 at 4763.683 kb on - strand, within CA264_20690 at 4763.686 kb on - strand, within CA264_20690 at 4763.686 kb on - strand, within CA264_20690 at 4763.706 kb on - strand, within CA264_20690 at 4763.720 kb on - strand, within CA264_20690 at 4763.720 kb on - strand, within CA264_20690 at 4763.722 kb on + strand, within CA264_20690 at 4763.740 kb on - strand, within CA264_20690 at 4763.761 kb on + strand, within CA264_20690 at 4763.816 kb on + strand, within CA264_20690 at 4763.835 kb on - strand, within CA264_20690 at 4763.855 kb on + strand, within CA264_20690 at 4763.897 kb on + strand, within CA264_20690 at 4763.898 kb on - strand, within CA264_20690 at 4763.971 kb on + strand, within CA264_20690 at 4763.971 kb on + strand, within CA264_20690 at 4763.972 kb on - strand, within CA264_20690 at 4764.019 kb on + strand, within CA264_20690 at 4764.037 kb on + strand, within CA264_20690 at 4764.038 kb on - strand, within CA264_20690 at 4764.108 kb on + strand, within CA264_20690 at 4764.130 kb on + strand, within CA264_20690 at 4764.131 kb on - strand, within CA264_20690 at 4764.132 kb on + strand, within CA264_20690 at 4764.132 kb on + strand, within CA264_20690 at 4764.155 kb on - strand, within CA264_20690 at 4764.224 kb on - strand, within CA264_20690 at 4764.276 kb on + strand, within CA264_20690 at 4764.277 kb on - strand, within CA264_20690 at 4764.292 kb on + strand, within CA264_20690 at 4764.307 kb on + strand, within CA264_20690 at 4764.308 kb on - strand, within CA264_20690 at 4764.330 kb on - strand, within CA264_20690 at 4764.386 kb on - strand, within CA264_20690 at 4764.497 kb on + strand, within CA264_20690 at 4764.610 kb on + strand, within CA264_20690 at 4764.639 kb on + strand, within CA264_20690 at 4764.669 kb on + strand at 4764.669 kb on + strand at 4764.670 kb on - strand at 4764.670 kb on - strand at 4764.696 kb on + strand at 4764.697 kb on - strand at 4764.697 kb on - strand at 4764.840 kb on - strand at 4764.848 kb on + strand at 4764.848 kb on + strand at 4764.849 kb on - strand at 4764.849 kb on - strand at 4764.849 kb on - strand at 4764.850 kb on + strand at 4764.854 kb on + strand at 4764.855 kb on - strand at 4764.855 kb on - strand at 4764.891 kb on + strand at 4764.923 kb on - strand at 4764.923 kb on - strand at 4764.934 kb on + strand at 4764.960 kb on + strand at 4765.093 kb on + strand at 4765.093 kb on + strand at 4765.093 kb on + strand at 4765.094 kb on - strand at 4765.094 kb on - strand at 4765.094 kb on - strand at 4765.146 kb on + strand, within CA264_20695 at 4765.147 kb on - strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.148 kb on + strand, within CA264_20695 at 4765.149 kb on - strand, within CA264_20695 at 4765.194 kb on + strand, within CA264_20695 at 4765.197 kb on + strand, within CA264_20695 at 4765.197 kb on + strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.198 kb on - strand, within CA264_20695 at 4765.227 kb on + strand, within CA264_20695 at 4765.227 kb on + strand, within CA264_20695 at 4765.228 kb on - strand, within CA264_20695 at 4765.291 kb on + strand, within CA264_20695 at 4765.292 kb on - strand, within CA264_20695 at 4765.318 kb on - strand, within CA264_20695 at 4765.318 kb on - strand, within CA264_20695 at 4765.324 kb on + strand, within CA264_20695 at 4765.324 kb on + strand, within CA264_20695 at 4765.398 kb on - strand, within CA264_20695 at 4765.432 kb on + strand, within CA264_20695 at 4765.432 kb on + strand, within CA264_20695 at 4765.434 kb on + strand, within CA264_20695 at 4765.435 kb on - strand, within CA264_20695 at 4765.562 kb on - strand, within CA264_20695 at 4765.577 kb on + strand, within CA264_20695 at 4765.578 kb on - strand, within CA264_20695 at 4765.578 kb on - strand, within CA264_20695 at 4765.665 kb on - strand, within CA264_20695 at 4765.688 kb on - strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.699 kb on + strand, within CA264_20695 at 4765.700 kb on - strand, within CA264_20695 at 4765.700 kb on - strand, within CA264_20695 at 4765.703 kb on + strand, within CA264_20695 at 4765.704 kb on - strand, within CA264_20695
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,761,751 - CA264_20680 0.79 -0.7 4,761,799 - -0.1 4,761,826 - -0.7 4,761,826 - +0.4 4,761,826 - -0.2 4,761,844 - -0.4 4,761,844 - -0.1 4,761,851 + +0.9 4,761,859 + -0.2 4,761,921 + +0.9 4,761,922 - -1.1 4,761,922 - -0.0 4,761,922 - -0.9 4,761,966 - +0.6 4,761,974 - +1.0 4,761,986 + -0.5 4,761,987 - -0.4 4,762,129 - CA264_20685 0.29 -0.8 4,762,129 - CA264_20685 0.29 +0.8 4,762,160 + CA264_20685 0.35 -0.1 4,762,161 - CA264_20685 0.35 +0.2 4,762,181 + CA264_20685 0.38 -0.2 4,762,203 + CA264_20685 0.43 +0.3 4,762,203 + CA264_20685 0.43 -0.8 4,762,258 + CA264_20685 0.53 +0.5 4,762,259 - CA264_20685 0.53 -0.2 4,762,261 - CA264_20685 0.53 -1.4 4,762,296 - CA264_20685 0.60 +0.6 4,762,360 + CA264_20685 0.71 -0.4 4,762,361 - CA264_20685 0.72 -1.0 4,762,368 + CA264_20685 0.73 -0.4 4,762,390 + CA264_20685 0.77 +0.1 4,762,437 + CA264_20685 0.86 +0.1 4,762,467 - +0.4 4,762,475 - -0.0 4,762,502 - -0.5 4,762,516 + -0.2 4,762,517 - -1.8 4,762,517 - -0.2 4,762,517 - -1.5 4,762,517 - -0.3 4,762,521 - -0.2 4,762,541 - +0.0 4,762,541 - -0.2 4,762,542 + -0.4 4,762,542 + -0.2 4,762,543 - -1.0 4,762,582 + +0.3 4,762,640 - +0.1 4,762,641 + -0.0 4,762,641 + +0.1 4,762,680 + +0.6 4,762,681 - -0.2 4,762,869 - -0.8 4,762,875 - -0.8 4,762,877 + -0.1 4,762,877 + +0.6 4,762,877 + -0.4 4,762,878 - -0.4 4,762,878 - -1.2 4,762,896 - -0.8 4,763,001 - CA264_20690 0.12 -0.7 4,763,032 + CA264_20690 0.14 -0.5 4,763,162 + CA264_20690 0.20 +0.7 4,763,212 - CA264_20690 0.22 -1.2 4,763,223 - CA264_20690 0.23 -0.6 4,763,253 + CA264_20690 0.24 -1.8 4,763,254 - CA264_20690 0.24 -0.4 4,763,256 - CA264_20690 0.24 +1.8 4,763,256 - CA264_20690 0.24 +1.1 4,763,256 - CA264_20690 0.24 -0.1 4,763,290 + CA264_20690 0.26 -0.2 4,763,291 - CA264_20690 0.26 +0.1 4,763,291 - CA264_20690 0.26 -1.9 4,763,337 - CA264_20690 0.28 -0.0 4,763,409 - CA264_20690 0.32 -0.0 4,763,410 + CA264_20690 0.32 -0.5 4,763,449 + CA264_20690 0.33 +0.1 4,763,497 - CA264_20690 0.36 -0.4 4,763,497 - CA264_20690 0.36 +0.6 4,763,515 + CA264_20690 0.36 +1.2 4,763,515 + CA264_20690 0.36 -0.1 4,763,516 - CA264_20690 0.37 -2.0 4,763,625 - CA264_20690 0.42 +0.4 4,763,678 + CA264_20690 0.44 -0.0 4,763,679 - CA264_20690 0.44 -1.1 4,763,682 + CA264_20690 0.44 -0.7 4,763,682 + CA264_20690 0.44 +0.3 4,763,683 - CA264_20690 0.44 -0.8 4,763,686 - CA264_20690 0.44 -0.0 4,763,686 - CA264_20690 0.44 +0.5 4,763,706 - CA264_20690 0.45 -1.0 4,763,720 - CA264_20690 0.46 -0.5 4,763,720 - CA264_20690 0.46 +0.9 4,763,722 + CA264_20690 0.46 -0.2 4,763,740 - CA264_20690 0.47 -1.1 4,763,761 + CA264_20690 0.48 +1.8 4,763,816 + CA264_20690 0.50 -0.7 4,763,835 - CA264_20690 0.51 -0.4 4,763,855 + CA264_20690 0.52 -1.4 4,763,897 + CA264_20690 0.54 -1.1 4,763,898 - CA264_20690 0.54 -0.3 4,763,971 + CA264_20690 0.58 -0.4 4,763,971 + CA264_20690 0.58 -0.5 4,763,972 - CA264_20690 0.58 +0.5 4,764,019 + CA264_20690 0.60 +0.0 4,764,037 + CA264_20690 0.61 +1.1 4,764,038 - CA264_20690 0.61 -0.1 4,764,108 + CA264_20690 0.64 -0.1 4,764,130 + CA264_20690 0.65 -0.3 4,764,131 - CA264_20690 0.65 +2.1 4,764,132 + CA264_20690 0.65 -0.2 4,764,132 + CA264_20690 0.65 -0.0 4,764,155 - CA264_20690 0.66 -0.4 4,764,224 - CA264_20690 0.70 -0.1 4,764,276 + CA264_20690 0.72 -0.1 4,764,277 - CA264_20690 0.72 -0.7 4,764,292 + CA264_20690 0.73 -0.8 4,764,307 + CA264_20690 0.73 -0.4 4,764,308 - CA264_20690 0.73 -0.2 4,764,330 - CA264_20690 0.74 -0.4 4,764,386 - CA264_20690 0.77 +0.6 4,764,497 + CA264_20690 0.82 +0.4 4,764,610 + CA264_20690 0.88 +0.1 4,764,639 + CA264_20690 0.89 -0.1 4,764,669 + -0.1 4,764,669 + -0.3 4,764,670 - +0.7 4,764,670 - -0.6 4,764,696 + +0.3 4,764,697 - +1.4 4,764,697 - +0.1 4,764,840 - -0.9 4,764,848 + -0.3 4,764,848 + -0.1 4,764,849 - -0.8 4,764,849 - +0.2 4,764,849 - -0.5 4,764,850 + -0.5 4,764,854 + -0.1 4,764,855 - -0.0 4,764,855 - +0.1 4,764,891 + -0.3 4,764,923 - -0.4 4,764,923 - +0.4 4,764,934 + -1.1 4,764,960 + -0.9 4,765,093 + -1.9 4,765,093 + +0.4 4,765,093 + +0.0 4,765,094 - -1.1 4,765,094 - -0.4 4,765,094 - +1.9 4,765,146 + CA264_20695 0.11 +0.2 4,765,147 - CA264_20695 0.11 +0.6 4,765,148 + CA264_20695 0.11 +0.4 4,765,148 + CA264_20695 0.11 +0.4 4,765,148 + CA264_20695 0.11 +0.3 4,765,149 - CA264_20695 0.11 -0.1 4,765,194 + CA264_20695 0.13 -1.1 4,765,197 + CA264_20695 0.13 -0.7 4,765,197 + CA264_20695 0.13 -1.4 4,765,198 - CA264_20695 0.13 -1.3 4,765,198 - CA264_20695 0.13 -1.5 4,765,198 - CA264_20695 0.13 -1.1 4,765,227 + CA264_20695 0.15 -0.2 4,765,227 + CA264_20695 0.15 +0.3 4,765,228 - CA264_20695 0.15 +0.2 4,765,291 + CA264_20695 0.18 +0.2 4,765,292 - CA264_20695 0.18 +0.2 4,765,318 - CA264_20695 0.20 -0.7 4,765,318 - CA264_20695 0.20 +0.2 4,765,324 + CA264_20695 0.20 +0.3 4,765,324 + CA264_20695 0.20 -0.6 4,765,398 - CA264_20695 0.24 -0.8 4,765,432 + CA264_20695 0.26 +0.1 4,765,432 + CA264_20695 0.26 -0.4 4,765,434 + CA264_20695 0.26 +0.6 4,765,435 - CA264_20695 0.26 -1.1 4,765,562 - CA264_20695 0.33 +0.5 4,765,577 + CA264_20695 0.34 +0.5 4,765,578 - CA264_20695 0.34 +0.1 4,765,578 - CA264_20695 0.34 +0.4 4,765,665 - CA264_20695 0.39 -0.1 4,765,688 - CA264_20695 0.40 +0.1 4,765,699 + CA264_20695 0.40 -1.5 4,765,699 + CA264_20695 0.40 -0.1 4,765,699 + CA264_20695 0.40 +0.6 4,765,699 + CA264_20695 0.40 -0.9 4,765,700 - CA264_20695 0.41 +0.0 4,765,700 - CA264_20695 0.41 -0.7 4,765,703 + CA264_20695 0.41 +0.3 4,765,704 - CA264_20695 0.41 +0.2
Or see this region's nucleotide sequence