Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20545 and CA264_20550 are separated by 129 nucleotides CA264_20550 and CA264_20555 overlap by 8 nucleotides CA264_20555 and CA264_20560 are separated by 211 nucleotides CA264_20560 and CA264_20565 are separated by 69 nucleotides
CA264_20545: CA264_20545 - epimerase, at 4,733,843 to 4,734,760
_20545
CA264_20550: CA264_20550 - GTP cyclohydrolase I FolE, at 4,734,890 to 4,735,558
_20550
CA264_20555: CA264_20555 - 6-pyruvoyl tetrahydrobiopterin synthase, at 4,735,551 to 4,735,958
_20555
CA264_20560: CA264_20560 - DNA repair ATPase, at 4,736,170 to 4,736,868
_20560
CA264_20565: CA264_20565 - hypothetical protein, at 4,736,938 to 4,737,888
_20565
Position (kb) 4735
4736 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 4734.568 kb on + strand, within CA264_20545 at 4734.568 kb on + strand, within CA264_20545 at 4734.569 kb on - strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.570 kb on + strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.571 kb on - strand, within CA264_20545 at 4734.599 kb on + strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.600 kb on - strand, within CA264_20545 at 4734.602 kb on - strand, within CA264_20545 at 4734.634 kb on + strand, within CA264_20545 at 4734.635 kb on - strand, within CA264_20545 at 4734.720 kb on - strand at 4734.761 kb on - strand at 4734.761 kb on - strand at 4734.769 kb on - strand at 4734.790 kb on + strand at 4734.796 kb on - strand at 4734.813 kb on - strand at 4734.813 kb on - strand at 4734.830 kb on + strand at 4734.836 kb on - strand at 4734.878 kb on - strand at 4734.878 kb on - strand at 4735.182 kb on + strand, within CA264_20550 at 4735.561 kb on + strand at 4735.562 kb on - strand at 4735.562 kb on - strand at 4735.588 kb on + strand at 4735.589 kb on - strand at 4735.595 kb on + strand, within CA264_20555 at 4735.595 kb on + strand, within CA264_20555 at 4735.828 kb on + strand, within CA264_20555 at 4735.905 kb on - strand, within CA264_20555 at 4735.908 kb on + strand, within CA264_20555 at 4735.958 kb on + strand at 4735.963 kb on + strand at 4735.963 kb on + strand at 4735.963 kb on + strand at 4736.028 kb on - strand at 4736.267 kb on + strand, within CA264_20560 at 4736.300 kb on + strand, within CA264_20560 at 4736.300 kb on + strand, within CA264_20560 at 4736.468 kb on - strand at 4736.468 kb on - strand, within CA264_20560 at 4736.500 kb on + strand, within CA264_20560 at 4736.530 kb on + strand, within CA264_20560 at 4736.575 kb on + strand, within CA264_20560 at 4736.600 kb on + strand, within CA264_20560 at 4736.672 kb on + strand, within CA264_20560 at 4736.685 kb on - strand, within CA264_20560 at 4736.905 kb on + strand at 4736.905 kb on + strand at 4736.935 kb on + strand at 4736.936 kb on - strand at 4736.939 kb on + strand at 4736.940 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,734,568 + CA264_20545 0.79 -1.0 4,734,568 + CA264_20545 0.79 -0.6 4,734,569 - CA264_20545 0.79 +0.0 4,734,570 + CA264_20545 0.79 -2.3 4,734,570 + CA264_20545 0.79 -2.7 4,734,571 - CA264_20545 0.79 -0.2 4,734,571 - CA264_20545 0.79 -1.1 4,734,599 + CA264_20545 0.82 -2.1 4,734,600 - CA264_20545 0.82 +0.6 4,734,600 - CA264_20545 0.82 +0.6 4,734,602 - CA264_20545 0.83 -1.3 4,734,634 + CA264_20545 0.86 -1.3 4,734,635 - CA264_20545 0.86 -0.3 4,734,720 - -0.2 4,734,761 - -0.0 4,734,761 - -0.1 4,734,769 - -0.5 4,734,790 + -4.3 4,734,796 - -0.6 4,734,813 - +0.4 4,734,813 - +1.1 4,734,830 + -2.3 4,734,836 - -0.6 4,734,878 - -0.5 4,734,878 - +0.2 4,735,182 + CA264_20550 0.44 -1.9 4,735,561 + -2.3 4,735,562 - -1.6 4,735,562 - -2.7 4,735,588 + -0.8 4,735,589 - +0.9 4,735,595 + CA264_20555 0.11 -0.8 4,735,595 + CA264_20555 0.11 -1.1 4,735,828 + CA264_20555 0.68 +0.4 4,735,905 - CA264_20555 0.87 -2.7 4,735,908 + CA264_20555 0.88 -0.7 4,735,958 + -0.2 4,735,963 + +1.2 4,735,963 + -0.6 4,735,963 + -0.4 4,736,028 - -0.4 4,736,267 + CA264_20560 0.14 -2.7 4,736,300 + CA264_20560 0.19 +0.5 4,736,300 + CA264_20560 0.19 +0.2 4,736,468 - +2.9 4,736,468 - CA264_20560 0.43 +1.4 4,736,500 + CA264_20560 0.47 -0.2 4,736,530 + CA264_20560 0.52 -0.3 4,736,575 + CA264_20560 0.58 -0.9 4,736,600 + CA264_20560 0.62 -1.9 4,736,672 + CA264_20560 0.72 -1.0 4,736,685 - CA264_20560 0.74 -0.1 4,736,905 + -0.5 4,736,905 + -0.0 4,736,935 + +0.1 4,736,936 - +1.6 4,736,939 + -0.2 4,736,940 - +1.1
Or see this region's nucleotide sequence