Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20130 and CA264_20135 are separated by 501 nucleotides CA264_20135 and CA264_20140 overlap by 4 nucleotides
CA264_20130: CA264_20130 - hypothetical protein, at 4,641,083 to 4,641,619
_20130
CA264_20135: CA264_20135 - hypothetical protein, at 4,642,121 to 4,643,182
_20135
CA264_20140: CA264_20140 - acriflavin resistance protein, at 4,643,179 to 4,646,277
_20140
Position (kb)
4642
4643
4644 Strain fitness (log2 ratio)
-2
-1
0
1 at 4641.138 kb on - strand, within CA264_20130 at 4641.174 kb on - strand, within CA264_20130 at 4641.182 kb on + strand, within CA264_20130 at 4641.256 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.269 kb on + strand, within CA264_20130 at 4641.280 kb on - strand, within CA264_20130 at 4641.323 kb on + strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.324 kb on - strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.325 kb on + strand, within CA264_20130 at 4641.329 kb on + strand, within CA264_20130 at 4641.380 kb on + strand, within CA264_20130 at 4641.396 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.449 kb on + strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.450 kb on - strand, within CA264_20130 at 4641.527 kb on - strand, within CA264_20130 at 4641.537 kb on + strand, within CA264_20130 at 4641.693 kb on + strand at 4641.761 kb on + strand at 4641.762 kb on - strand at 4641.855 kb on + strand at 4641.856 kb on - strand at 4641.856 kb on - strand at 4641.859 kb on + strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.860 kb on - strand at 4641.870 kb on - strand at 4641.884 kb on - strand at 4641.919 kb on - strand at 4641.946 kb on + strand at 4641.946 kb on + strand at 4641.947 kb on - strand at 4641.947 kb on - strand at 4641.947 kb on - strand at 4642.061 kb on + strand at 4642.067 kb on + strand at 4642.067 kb on + strand at 4642.067 kb on + strand at 4642.068 kb on - strand at 4642.068 kb on - strand at 4642.068 kb on - strand at 4642.078 kb on + strand at 4642.104 kb on + strand at 4642.105 kb on - strand at 4642.106 kb on + strand at 4642.146 kb on + strand at 4642.149 kb on + strand at 4642.152 kb on + strand at 4642.422 kb on - strand, within CA264_20135 at 4642.434 kb on + strand, within CA264_20135 at 4642.539 kb on + strand, within CA264_20135 at 4642.557 kb on + strand, within CA264_20135 at 4642.608 kb on - strand, within CA264_20135 at 4642.662 kb on + strand, within CA264_20135 at 4642.663 kb on - strand, within CA264_20135 at 4642.693 kb on - strand, within CA264_20135 at 4642.696 kb on + strand, within CA264_20135 at 4642.697 kb on - strand, within CA264_20135 at 4642.697 kb on - strand, within CA264_20135 at 4642.697 kb on - strand, within CA264_20135 at 4642.699 kb on - strand, within CA264_20135 at 4642.699 kb on - strand, within CA264_20135 at 4642.853 kb on + strand, within CA264_20135 at 4642.937 kb on - strand, within CA264_20135 at 4642.937 kb on - strand, within CA264_20135 at 4642.954 kb on - strand, within CA264_20135 at 4642.970 kb on - strand, within CA264_20135 at 4642.984 kb on - strand, within CA264_20135 at 4642.998 kb on - strand, within CA264_20135 at 4643.046 kb on + strand, within CA264_20135 at 4643.047 kb on - strand, within CA264_20135 at 4643.076 kb on + strand at 4643.077 kb on - strand at 4643.077 kb on - strand at 4643.172 kb on + strand at 4643.201 kb on + strand at 4643.217 kb on - strand at 4643.250 kb on - strand at 4643.386 kb on + strand at 4643.386 kb on + strand at 4643.409 kb on - strand at 4643.462 kb on + strand at 4643.635 kb on + strand, within CA264_20140 at 4643.636 kb on - strand, within CA264_20140 at 4643.653 kb on + strand, within CA264_20140 at 4643.654 kb on - strand, within CA264_20140 at 4643.654 kb on - strand, within CA264_20140 at 4643.656 kb on - strand, within CA264_20140 at 4643.666 kb on + strand, within CA264_20140 at 4643.713 kb on + strand, within CA264_20140 at 4643.742 kb on + strand, within CA264_20140 at 4643.804 kb on + strand, within CA264_20140 at 4643.884 kb on + strand, within CA264_20140 at 4643.884 kb on + strand, within CA264_20140 at 4643.886 kb on + strand, within CA264_20140 at 4643.886 kb on + strand, within CA264_20140 at 4643.887 kb on - strand, within CA264_20140 at 4644.164 kb on + strand, within CA264_20140
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,641,138 - CA264_20130 0.10 -0.0 4,641,174 - CA264_20130 0.17 -0.2 4,641,182 + CA264_20130 0.18 -0.0 4,641,256 + CA264_20130 0.32 +0.9 4,641,269 + CA264_20130 0.35 +0.6 4,641,269 + CA264_20130 0.35 -0.1 4,641,280 - CA264_20130 0.37 +0.1 4,641,323 + CA264_20130 0.45 +0.4 4,641,324 - CA264_20130 0.45 +0.1 4,641,324 - CA264_20130 0.45 +0.1 4,641,325 + CA264_20130 0.45 -1.4 4,641,325 + CA264_20130 0.45 -0.2 4,641,329 + CA264_20130 0.46 +0.4 4,641,380 + CA264_20130 0.55 +1.3 4,641,396 + CA264_20130 0.58 -1.3 4,641,449 + CA264_20130 0.68 -0.1 4,641,449 + CA264_20130 0.68 -0.0 4,641,449 + CA264_20130 0.68 -0.4 4,641,450 - CA264_20130 0.68 -0.7 4,641,450 - CA264_20130 0.68 -0.1 4,641,450 - CA264_20130 0.68 -0.5 4,641,527 - CA264_20130 0.83 +0.4 4,641,537 + CA264_20130 0.85 +0.2 4,641,693 + -0.7 4,641,761 + +0.1 4,641,762 - -0.9 4,641,855 + +0.2 4,641,856 - -0.6 4,641,856 - -1.1 4,641,859 + -0.5 4,641,860 - -0.7 4,641,860 - -0.2 4,641,860 - -0.9 4,641,860 - -0.9 4,641,870 - +0.0 4,641,884 - +0.9 4,641,919 - +0.8 4,641,946 + -0.9 4,641,946 + -0.3 4,641,947 - +1.5 4,641,947 - -1.0 4,641,947 - -0.4 4,642,061 + -1.2 4,642,067 + -0.9 4,642,067 + +0.9 4,642,067 + -0.5 4,642,068 - -1.4 4,642,068 - -0.2 4,642,068 - -0.7 4,642,078 + -0.6 4,642,104 + +0.6 4,642,105 - -0.2 4,642,106 + -0.1 4,642,146 + -0.4 4,642,149 + -1.5 4,642,152 + +0.7 4,642,422 - CA264_20135 0.28 +0.2 4,642,434 + CA264_20135 0.29 +0.1 4,642,539 + CA264_20135 0.39 +0.5 4,642,557 + CA264_20135 0.41 -0.3 4,642,608 - CA264_20135 0.46 +0.9 4,642,662 + CA264_20135 0.51 -0.6 4,642,663 - CA264_20135 0.51 -0.8 4,642,693 - CA264_20135 0.54 +0.5 4,642,696 + CA264_20135 0.54 -0.2 4,642,697 - CA264_20135 0.54 -0.1 4,642,697 - CA264_20135 0.54 +0.1 4,642,697 - CA264_20135 0.54 +0.1 4,642,699 - CA264_20135 0.54 -1.0 4,642,699 - CA264_20135 0.54 -2.4 4,642,853 + CA264_20135 0.69 -0.4 4,642,937 - CA264_20135 0.77 -0.3 4,642,937 - CA264_20135 0.77 +1.3 4,642,954 - CA264_20135 0.78 -0.1 4,642,970 - CA264_20135 0.80 -0.6 4,642,984 - CA264_20135 0.81 +0.0 4,642,998 - CA264_20135 0.83 +0.1 4,643,046 + CA264_20135 0.87 +0.4 4,643,047 - CA264_20135 0.87 -0.3 4,643,076 + +0.2 4,643,077 - -0.6 4,643,077 - +0.3 4,643,172 + -0.4 4,643,201 + -0.0 4,643,217 - -0.2 4,643,250 - +0.5 4,643,386 + +0.9 4,643,386 + +0.2 4,643,409 - +0.1 4,643,462 + +0.4 4,643,635 + CA264_20140 0.15 -0.7 4,643,636 - CA264_20140 0.15 -0.1 4,643,653 + CA264_20140 0.15 -0.6 4,643,654 - CA264_20140 0.15 -0.1 4,643,654 - CA264_20140 0.15 -0.2 4,643,656 - CA264_20140 0.15 +1.0 4,643,666 + CA264_20140 0.16 +0.9 4,643,713 + CA264_20140 0.17 -0.8 4,643,742 + CA264_20140 0.18 +0.6 4,643,804 + CA264_20140 0.20 -1.6 4,643,884 + CA264_20140 0.23 +1.1 4,643,884 + CA264_20140 0.23 +0.1 4,643,886 + CA264_20140 0.23 -0.1 4,643,886 + CA264_20140 0.23 +0.9 4,643,887 - CA264_20140 0.23 -0.4 4,644,164 + CA264_20140 0.32 +0.0
Or see this region's nucleotide sequence