Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19870 and CA264_19875 are separated by 176 nucleotides CA264_19875 and CA264_19880 are separated by 88 nucleotides CA264_19880 and CA264_19885 overlap by 4 nucleotides CA264_19885 and CA264_19890 are separated by 82 nucleotides
CA264_19870: CA264_19870 - protein translocase subunit SecDF, at 4,582,926 to 4,585,922
_19870
CA264_19875: CA264_19875 - RNA methyltransferase, at 4,586,099 to 4,586,428
_19875
CA264_19880: CA264_19880 - potassium transporter KtrA, at 4,586,517 to 4,587,209
_19880
CA264_19885: CA264_19885 - uridine kinase, at 4,587,206 to 4,587,826
_19885
CA264_19890: CA264_19890 - non-canonical purine NTP pyrophosphatase, at 4,587,909 to 4,588,487
_19890
Position (kb)
4586
4587
4588 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4585.926 kb on + strand at 4585.926 kb on + strand at 4585.933 kb on - strand at 4585.937 kb on + strand at 4585.938 kb on - strand at 4585.941 kb on + strand at 4585.942 kb on - strand at 4585.943 kb on + strand at 4585.944 kb on - strand at 4585.944 kb on - strand at 4585.945 kb on + strand at 4585.945 kb on + strand at 4585.945 kb on + strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.946 kb on - strand at 4585.949 kb on - strand at 4585.965 kb on + strand at 4585.965 kb on + strand at 4585.966 kb on - strand at 4585.966 kb on - strand at 4585.987 kb on + strand at 4585.987 kb on + strand at 4585.987 kb on + strand at 4585.988 kb on - strand at 4586.002 kb on + strand at 4586.002 kb on + strand at 4586.005 kb on - strand at 4586.085 kb on - strand at 4586.093 kb on + strand at 4586.131 kb on + strand at 4586.172 kb on + strand, within CA264_19875 at 4586.172 kb on + strand, within CA264_19875 at 4586.283 kb on - strand, within CA264_19875 at 4586.294 kb on + strand, within CA264_19875 at 4586.475 kb on + strand at 4586.475 kb on + strand at 4586.476 kb on - strand at 4586.476 kb on - strand at 4586.488 kb on - strand at 4586.518 kb on + strand at 4587.215 kb on + strand at 4587.228 kb on - strand at 4587.228 kb on - strand at 4587.232 kb on - strand at 4587.232 kb on - strand at 4587.303 kb on + strand, within CA264_19885 at 4587.303 kb on + strand, within CA264_19885 at 4587.311 kb on - strand, within CA264_19885 at 4587.387 kb on - strand, within CA264_19885 at 4587.503 kb on + strand, within CA264_19885 at 4587.543 kb on - strand, within CA264_19885 at 4587.543 kb on - strand, within CA264_19885 at 4587.543 kb on - strand, within CA264_19885 at 4587.545 kb on + strand, within CA264_19885 at 4587.566 kb on - strand, within CA264_19885 at 4587.566 kb on - strand, within CA264_19885 at 4587.566 kb on - strand, within CA264_19885 at 4587.658 kb on + strand, within CA264_19885 at 4587.659 kb on - strand, within CA264_19885 at 4587.706 kb on - strand, within CA264_19885 at 4587.706 kb on - strand, within CA264_19885 at 4587.706 kb on - strand, within CA264_19885 at 4587.761 kb on - strand, within CA264_19885 at 4587.834 kb on + strand at 4587.870 kb on + strand at 4587.870 kb on + strand at 4587.870 kb on + strand at 4587.871 kb on - strand at 4587.871 kb on - strand at 4587.872 kb on + strand at 4587.872 kb on + strand at 4587.873 kb on - strand at 4587.873 kb on - strand at 4587.873 kb on - strand at 4587.873 kb on - strand at 4587.873 kb on - strand at 4587.873 kb on - strand at 4587.885 kb on + strand at 4587.885 kb on + strand at 4587.897 kb on - strand at 4588.022 kb on + strand, within CA264_19890 at 4588.072 kb on - strand, within CA264_19890 at 4588.073 kb on + strand, within CA264_19890 at 4588.073 kb on + strand, within CA264_19890 at 4588.074 kb on - strand, within CA264_19890 at 4588.074 kb on - strand, within CA264_19890 at 4588.074 kb on - strand, within CA264_19890
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,585,926 + +1.2 4,585,926 + -0.6 4,585,933 - +0.5 4,585,937 + +0.6 4,585,938 - -1.0 4,585,941 + -1.3 4,585,942 - -1.1 4,585,943 + -0.5 4,585,944 - -0.4 4,585,944 - -0.1 4,585,945 + +0.5 4,585,945 + +0.6 4,585,945 + +0.4 4,585,946 - -1.5 4,585,946 - -0.5 4,585,946 - -0.8 4,585,946 - +0.2 4,585,949 - -0.4 4,585,965 + -0.7 4,585,965 + -0.3 4,585,966 - -0.9 4,585,966 - -1.6 4,585,987 + +0.1 4,585,987 + -0.5 4,585,987 + +0.1 4,585,988 - -0.8 4,586,002 + +0.1 4,586,002 + +0.1 4,586,005 - -0.3 4,586,085 - -0.0 4,586,093 + +0.1 4,586,131 + +0.1 4,586,172 + CA264_19875 0.22 +0.2 4,586,172 + CA264_19875 0.22 +0.4 4,586,283 - CA264_19875 0.56 +1.0 4,586,294 + CA264_19875 0.59 -0.7 4,586,475 + -0.1 4,586,475 + +0.1 4,586,476 - -1.3 4,586,476 - -0.9 4,586,488 - -0.3 4,586,518 + +0.4 4,587,215 + +0.7 4,587,228 - +0.1 4,587,228 - +0.7 4,587,232 - -0.7 4,587,232 - +0.9 4,587,303 + CA264_19885 0.16 +1.3 4,587,303 + CA264_19885 0.16 +1.0 4,587,311 - CA264_19885 0.17 +1.9 4,587,387 - CA264_19885 0.29 +0.9 4,587,503 + CA264_19885 0.48 +1.3 4,587,543 - CA264_19885 0.54 +1.4 4,587,543 - CA264_19885 0.54 +1.4 4,587,543 - CA264_19885 0.54 +0.3 4,587,545 + CA264_19885 0.55 +1.1 4,587,566 - CA264_19885 0.58 -0.4 4,587,566 - CA264_19885 0.58 -0.3 4,587,566 - CA264_19885 0.58 +0.1 4,587,658 + CA264_19885 0.73 +1.6 4,587,659 - CA264_19885 0.73 +0.4 4,587,706 - CA264_19885 0.81 +1.7 4,587,706 - CA264_19885 0.81 +1.1 4,587,706 - CA264_19885 0.81 +1.0 4,587,761 - CA264_19885 0.89 +1.3 4,587,834 + +1.5 4,587,870 + -1.2 4,587,870 + -0.6 4,587,870 + -0.2 4,587,871 - +0.8 4,587,871 - +0.8 4,587,872 + +0.3 4,587,872 + -0.5 4,587,873 - +0.1 4,587,873 - -0.2 4,587,873 - +0.1 4,587,873 - -0.0 4,587,873 - +0.2 4,587,873 - -0.3 4,587,885 + +0.6 4,587,885 + -3.3 4,587,897 - -0.1 4,588,022 + CA264_19890 0.20 -0.5 4,588,072 - CA264_19890 0.28 +0.7 4,588,073 + CA264_19890 0.28 -0.1 4,588,073 + CA264_19890 0.28 +0.4 4,588,074 - CA264_19890 0.28 +0.2 4,588,074 - CA264_19890 0.28 -0.4 4,588,074 - CA264_19890 0.28 -0.2
Or see this region's nucleotide sequence