Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19770 and CA264_19775 are separated by 10 nucleotides CA264_19775 and CA264_19780 are separated by 87 nucleotides CA264_19780 and CA264_19785 are separated by 388 nucleotides
CA264_19770: CA264_19770 - ATPase, at 4,563,164 to 4,563,688
_19770
CA264_19775: CA264_19775 - aldose epimerase, at 4,563,699 to 4,564,574
_19775
CA264_19780: CA264_19780 - hypothetical protein, at 4,564,662 to 4,564,910
_19780
CA264_19785: CA264_19785 - TonB-dependent receptor, at 4,565,299 to 4,567,731
_19785
Position (kb)
4564
4565 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4563.686 kb on + strand at 4563.703 kb on + strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.705 kb on + strand at 4563.706 kb on - strand at 4563.706 kb on - strand at 4563.706 kb on - strand at 4563.854 kb on - strand, within CA264_19775 at 4563.854 kb on - strand, within CA264_19775 at 4563.857 kb on - strand, within CA264_19775 at 4563.879 kb on + strand, within CA264_19775 at 4563.880 kb on - strand, within CA264_19775 at 4563.882 kb on - strand, within CA264_19775 at 4563.900 kb on + strand, within CA264_19775 at 4563.941 kb on + strand, within CA264_19775 at 4563.941 kb on + strand, within CA264_19775 at 4563.942 kb on - strand, within CA264_19775 at 4564.043 kb on + strand, within CA264_19775 at 4564.043 kb on + strand, within CA264_19775 at 4564.136 kb on + strand, within CA264_19775 at 4564.165 kb on - strand, within CA264_19775 at 4564.178 kb on + strand, within CA264_19775 at 4564.303 kb on - strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.557 kb on - strand at 4564.589 kb on - strand at 4564.612 kb on + strand at 4564.613 kb on - strand at 4564.613 kb on - strand at 4564.663 kb on + strand at 4564.699 kb on - strand, within CA264_19780 at 4564.714 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.726 kb on + strand, within CA264_19780 at 4564.858 kb on + strand, within CA264_19780 at 4564.858 kb on + strand, within CA264_19780 at 4564.859 kb on - strand, within CA264_19780 at 4564.861 kb on + strand, within CA264_19780 at 4564.861 kb on + strand, within CA264_19780 at 4564.862 kb on - strand, within CA264_19780 at 4564.862 kb on - strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.871 kb on + strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.872 kb on - strand, within CA264_19780 at 4564.876 kb on - strand, within CA264_19780 at 4564.891 kb on + strand at 4564.891 kb on + strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.892 kb on - strand at 4564.894 kb on - strand at 4564.894 kb on - strand at 4564.894 kb on - strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.896 kb on + strand at 4564.897 kb on - strand at 4564.897 kb on - strand at 4564.903 kb on - strand at 4564.927 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.988 kb on + strand at 4564.998 kb on + strand at 4564.998 kb on + strand at 4564.999 kb on - strand at 4564.999 kb on - strand at 4565.008 kb on + strand at 4565.009 kb on - strand at 4565.009 kb on - strand at 4565.102 kb on - strand at 4565.120 kb on - strand at 4565.133 kb on + strand at 4565.145 kb on + strand at 4565.160 kb on + strand at 4565.160 kb on + strand at 4565.182 kb on - strand at 4565.225 kb on - strand at 4565.268 kb on + strand at 4565.279 kb on + strand at 4565.282 kb on + strand at 4565.309 kb on + strand at 4565.309 kb on + strand at 4565.333 kb on + strand at 4565.471 kb on - strand at 4565.501 kb on - strand at 4565.513 kb on + strand at 4565.513 kb on + strand at 4565.519 kb on - strand at 4565.527 kb on + strand at 4565.581 kb on - strand, within CA264_19785 at 4565.655 kb on + strand, within CA264_19785
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,563,686 + +0.3 4,563,703 + -0.0 4,563,704 - -0.3 4,563,704 - -1.0 4,563,704 - -1.0 4,563,704 - -0.7 4,563,705 + -0.3 4,563,706 - -1.1 4,563,706 - -1.0 4,563,706 - -0.1 4,563,854 - CA264_19775 0.18 -0.3 4,563,854 - CA264_19775 0.18 -0.5 4,563,857 - CA264_19775 0.18 -0.8 4,563,879 + CA264_19775 0.21 +0.3 4,563,880 - CA264_19775 0.21 -1.0 4,563,882 - CA264_19775 0.21 -0.5 4,563,900 + CA264_19775 0.23 -0.4 4,563,941 + CA264_19775 0.28 +0.1 4,563,941 + CA264_19775 0.28 -1.1 4,563,942 - CA264_19775 0.28 -0.9 4,564,043 + CA264_19775 0.39 -0.8 4,564,043 + CA264_19775 0.39 -0.4 4,564,136 + CA264_19775 0.50 -1.5 4,564,165 - CA264_19775 0.53 +0.3 4,564,178 + CA264_19775 0.55 -0.4 4,564,303 - CA264_19775 0.69 -1.5 4,564,315 + CA264_19775 0.70 +0.1 4,564,315 + CA264_19775 0.70 +0.7 4,564,316 - CA264_19775 0.70 -0.6 4,564,316 - CA264_19775 0.70 -1.1 4,564,316 - CA264_19775 0.70 +1.1 4,564,316 - CA264_19775 0.70 -0.4 4,564,557 - -0.0 4,564,589 - -0.4 4,564,612 + -0.7 4,564,613 - +0.1 4,564,613 - -0.5 4,564,663 + -0.3 4,564,699 - CA264_19780 0.15 +1.3 4,564,714 + CA264_19780 0.21 -0.8 4,564,726 + CA264_19780 0.26 +0.4 4,564,726 + CA264_19780 0.26 -0.3 4,564,726 + CA264_19780 0.26 -0.1 4,564,858 + CA264_19780 0.79 +0.4 4,564,858 + CA264_19780 0.79 +0.1 4,564,859 - CA264_19780 0.79 +0.5 4,564,861 + CA264_19780 0.80 -0.5 4,564,861 + CA264_19780 0.80 -0.0 4,564,862 - CA264_19780 0.80 +0.2 4,564,862 - CA264_19780 0.80 -1.2 4,564,871 + CA264_19780 0.84 +0.0 4,564,871 + CA264_19780 0.84 -0.5 4,564,871 + CA264_19780 0.84 +0.3 4,564,871 + CA264_19780 0.84 +0.5 4,564,872 - CA264_19780 0.84 +1.1 4,564,872 - CA264_19780 0.84 +0.1 4,564,872 - CA264_19780 0.84 -0.2 4,564,876 - CA264_19780 0.86 -0.2 4,564,891 + -0.4 4,564,891 + +0.8 4,564,892 - -0.7 4,564,892 - -0.2 4,564,892 - -0.3 4,564,892 - +0.4 4,564,894 - -0.4 4,564,894 - +0.0 4,564,894 - +0.3 4,564,896 + -0.6 4,564,896 + +0.7 4,564,896 + +1.0 4,564,896 + +0.3 4,564,897 - -0.2 4,564,897 - +0.3 4,564,903 - -0.1 4,564,927 + -0.0 4,564,988 + -1.9 4,564,988 + -1.8 4,564,988 + -0.3 4,564,988 + -0.1 4,564,998 + +0.7 4,564,998 + -0.0 4,564,999 - -0.7 4,564,999 - -1.4 4,565,008 + -0.7 4,565,009 - -1.3 4,565,009 - -0.9 4,565,102 - -1.8 4,565,120 - +0.4 4,565,133 + -0.8 4,565,145 + -2.5 4,565,160 + +0.0 4,565,160 + +0.2 4,565,182 - -1.8 4,565,225 - -1.8 4,565,268 + -0.0 4,565,279 + +0.4 4,565,282 + -0.2 4,565,309 + -1.5 4,565,309 + +0.9 4,565,333 + -0.6 4,565,471 - -3.3 4,565,501 - -3.0 4,565,513 + -0.9 4,565,513 + -0.2 4,565,519 - -2.0 4,565,527 + -0.4 4,565,581 - CA264_19785 0.12 -3.1 4,565,655 + CA264_19785 0.15 -1.8
Or see this region's nucleotide sequence