Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19765 and CA264_19770 are separated by 219 nucleotides CA264_19770 and CA264_19775 are separated by 10 nucleotides CA264_19775 and CA264_19780 are separated by 87 nucleotides
CA264_19765: CA264_19765 - hypothetical protein, at 4,562,537 to 4,562,944
_19765
CA264_19770: CA264_19770 - ATPase, at 4,563,164 to 4,563,688
_19770
CA264_19775: CA264_19775 - aldose epimerase, at 4,563,699 to 4,564,574
_19775
CA264_19780: CA264_19780 - hypothetical protein, at 4,564,662 to 4,564,910
_19780
Position (kb)
4563
4564 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4562.229 kb on + strand at 4562.230 kb on - strand at 4562.273 kb on + strand at 4562.274 kb on + strand at 4562.274 kb on + strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.275 kb on - strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.278 kb on + strand at 4562.281 kb on - strand at 4562.308 kb on + strand at 4562.315 kb on + strand at 4562.316 kb on - strand at 4562.316 kb on - strand at 4562.316 kb on - strand at 4562.487 kb on - strand at 4562.487 kb on - strand at 4562.519 kb on + strand at 4562.519 kb on + strand at 4562.561 kb on + strand at 4562.561 kb on + strand at 4562.562 kb on - strand at 4562.562 kb on - strand at 4562.641 kb on + strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.642 kb on - strand, within CA264_19765 at 4562.649 kb on - strand, within CA264_19765 at 4562.651 kb on - strand, within CA264_19765 at 4562.680 kb on + strand, within CA264_19765 at 4562.758 kb on - strand, within CA264_19765 at 4562.882 kb on + strand, within CA264_19765 at 4562.882 kb on + strand, within CA264_19765 at 4562.907 kb on + strand at 4562.908 kb on - strand at 4562.947 kb on + strand at 4563.087 kb on - strand at 4563.118 kb on - strand at 4563.118 kb on - strand at 4563.146 kb on - strand at 4563.272 kb on + strand, within CA264_19770 at 4563.312 kb on + strand, within CA264_19770 at 4563.313 kb on - strand, within CA264_19770 at 4563.394 kb on + strand, within CA264_19770 at 4563.686 kb on + strand at 4563.703 kb on + strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.704 kb on - strand at 4563.705 kb on + strand at 4563.706 kb on - strand at 4563.706 kb on - strand at 4563.706 kb on - strand at 4563.854 kb on - strand, within CA264_19775 at 4563.854 kb on - strand, within CA264_19775 at 4563.857 kb on - strand, within CA264_19775 at 4563.879 kb on + strand, within CA264_19775 at 4563.880 kb on - strand, within CA264_19775 at 4563.882 kb on - strand, within CA264_19775 at 4563.900 kb on + strand, within CA264_19775 at 4563.941 kb on + strand, within CA264_19775 at 4563.941 kb on + strand, within CA264_19775 at 4563.942 kb on - strand, within CA264_19775 at 4564.043 kb on + strand, within CA264_19775 at 4564.043 kb on + strand, within CA264_19775 at 4564.136 kb on + strand, within CA264_19775 at 4564.165 kb on - strand, within CA264_19775 at 4564.178 kb on + strand, within CA264_19775 at 4564.303 kb on - strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.315 kb on + strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.316 kb on - strand, within CA264_19775 at 4564.557 kb on - strand at 4564.589 kb on - strand at 4564.612 kb on + strand at 4564.613 kb on - strand at 4564.613 kb on - strand at 4564.663 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,562,229 + -1.1 4,562,230 - +0.3 4,562,273 + -0.5 4,562,274 + -0.4 4,562,274 + +0.1 4,562,275 - -0.1 4,562,275 - +1.1 4,562,275 - -0.1 4,562,275 - +0.5 4,562,275 - -0.2 4,562,278 + +0.8 4,562,278 + +0.4 4,562,278 + -1.4 4,562,278 + -0.2 4,562,281 - -0.1 4,562,308 + -0.8 4,562,315 + +0.7 4,562,316 - +0.0 4,562,316 - +0.6 4,562,316 - +0.2 4,562,487 - -1.0 4,562,487 - -0.4 4,562,519 + +0.5 4,562,519 + -1.4 4,562,561 + -1.7 4,562,561 + +0.0 4,562,562 - -0.4 4,562,562 - -0.0 4,562,641 + CA264_19765 0.25 +0.2 4,562,642 - CA264_19765 0.26 +0.5 4,562,642 - CA264_19765 0.26 -0.3 4,562,642 - CA264_19765 0.26 +0.5 4,562,649 - CA264_19765 0.27 -0.9 4,562,651 - CA264_19765 0.28 +0.5 4,562,680 + CA264_19765 0.35 +0.1 4,562,758 - CA264_19765 0.54 +0.4 4,562,882 + CA264_19765 0.85 +1.0 4,562,882 + CA264_19765 0.85 -0.2 4,562,907 + +0.7 4,562,908 - -0.4 4,562,947 + +0.8 4,563,087 - -2.0 4,563,118 - -0.0 4,563,118 - +0.4 4,563,146 - -0.6 4,563,272 + CA264_19770 0.21 -3.6 4,563,312 + CA264_19770 0.28 -2.5 4,563,313 - CA264_19770 0.28 -3.1 4,563,394 + CA264_19770 0.44 -1.4 4,563,686 + +0.3 4,563,703 + -0.0 4,563,704 - -0.3 4,563,704 - -1.0 4,563,704 - -1.0 4,563,704 - -0.7 4,563,705 + -0.3 4,563,706 - -1.1 4,563,706 - -1.0 4,563,706 - -0.1 4,563,854 - CA264_19775 0.18 -0.3 4,563,854 - CA264_19775 0.18 -0.5 4,563,857 - CA264_19775 0.18 -0.8 4,563,879 + CA264_19775 0.21 +0.3 4,563,880 - CA264_19775 0.21 -1.0 4,563,882 - CA264_19775 0.21 -0.5 4,563,900 + CA264_19775 0.23 -0.4 4,563,941 + CA264_19775 0.28 +0.1 4,563,941 + CA264_19775 0.28 -1.1 4,563,942 - CA264_19775 0.28 -0.9 4,564,043 + CA264_19775 0.39 -0.8 4,564,043 + CA264_19775 0.39 -0.4 4,564,136 + CA264_19775 0.50 -1.5 4,564,165 - CA264_19775 0.53 +0.3 4,564,178 + CA264_19775 0.55 -0.4 4,564,303 - CA264_19775 0.69 -1.5 4,564,315 + CA264_19775 0.70 +0.1 4,564,315 + CA264_19775 0.70 +0.7 4,564,316 - CA264_19775 0.70 -0.6 4,564,316 - CA264_19775 0.70 -1.1 4,564,316 - CA264_19775 0.70 +1.1 4,564,316 - CA264_19775 0.70 -0.4 4,564,557 - -0.0 4,564,589 - -0.4 4,564,612 + -0.7 4,564,613 - +0.1 4,564,613 - -0.5 4,564,663 + -0.3
Or see this region's nucleotide sequence