Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19730 and CA264_19735 are separated by 164 nucleotides CA264_19735 and CA264_19740 overlap by 8 nucleotides CA264_19740 and CA264_19745 are separated by 20 nucleotides
CA264_19730: CA264_19730 - peptidylprolyl isomerase, at 4,553,656 to 4,555,956
_19730
CA264_19735: CA264_19735 - ATP-binding protein, at 4,556,121 to 4,556,531
_19735
CA264_19740: CA264_19740 - anti-sigma F factor antagonist, at 4,556,524 to 4,556,862
_19740
CA264_19745: CA264_19745 - serine/threonine protein phosphatase, at 4,556,883 to 4,559,048
_19745
Position (kb)
4556
4557 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4555.593 kb on - strand, within CA264_19730 at 4555.637 kb on + strand, within CA264_19730 at 4555.638 kb on - strand, within CA264_19730 at 4555.745 kb on + strand at 4555.746 kb on - strand at 4555.746 kb on - strand at 4555.758 kb on - strand at 4555.781 kb on + strand at 4555.781 kb on + strand at 4555.782 kb on - strand at 4555.782 kb on - strand at 4555.814 kb on + strand at 4555.814 kb on + strand at 4555.815 kb on - strand at 4555.836 kb on + strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.837 kb on - strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.842 kb on + strand at 4555.843 kb on - strand at 4555.861 kb on - strand at 4555.933 kb on + strand at 4555.933 kb on + strand at 4555.939 kb on + strand at 4555.940 kb on - strand at 4555.940 kb on - strand at 4555.956 kb on + strand at 4556.006 kb on - strand at 4556.035 kb on + strand at 4556.036 kb on - strand at 4556.036 kb on - strand at 4556.109 kb on + strand at 4556.110 kb on - strand at 4556.110 kb on - strand at 4556.122 kb on + strand at 4556.122 kb on + strand at 4556.123 kb on - strand at 4556.525 kb on + strand at 4556.679 kb on + strand, within CA264_19740 at 4556.709 kb on - strand, within CA264_19740 at 4556.744 kb on + strand, within CA264_19740 at 4556.868 kb on + strand at 4556.869 kb on - strand at 4556.938 kb on + strand at 4556.976 kb on + strand at 4556.977 kb on - strand at 4556.978 kb on + strand at 4556.979 kb on - strand at 4556.979 kb on - strand at 4556.991 kb on - strand at 4557.014 kb on - strand at 4557.031 kb on + strand at 4557.031 kb on + strand at 4557.031 kb on + strand at 4557.032 kb on - strand at 4557.097 kb on + strand at 4557.098 kb on - strand at 4557.100 kb on - strand, within CA264_19745 at 4557.100 kb on - strand, within CA264_19745 at 4557.100 kb on - strand, within CA264_19745 at 4557.125 kb on - strand, within CA264_19745 at 4557.125 kb on - strand, within CA264_19745 at 4557.130 kb on + strand, within CA264_19745 at 4557.130 kb on + strand, within CA264_19745 at 4557.131 kb on - strand, within CA264_19745 at 4557.131 kb on - strand, within CA264_19745 at 4557.131 kb on - strand, within CA264_19745 at 4557.133 kb on + strand, within CA264_19745 at 4557.134 kb on - strand, within CA264_19745 at 4557.158 kb on - strand, within CA264_19745 at 4557.206 kb on - strand, within CA264_19745 at 4557.224 kb on + strand, within CA264_19745 at 4557.225 kb on - strand, within CA264_19745 at 4557.230 kb on + strand, within CA264_19745 at 4557.230 kb on + strand, within CA264_19745 at 4557.231 kb on - strand, within CA264_19745 at 4557.231 kb on - strand, within CA264_19745 at 4557.232 kb on + strand, within CA264_19745 at 4557.232 kb on + strand, within CA264_19745 at 4557.232 kb on + strand, within CA264_19745 at 4557.233 kb on - strand, within CA264_19745 at 4557.235 kb on + strand, within CA264_19745 at 4557.235 kb on + strand, within CA264_19745 at 4557.236 kb on - strand, within CA264_19745 at 4557.236 kb on - strand, within CA264_19745 at 4557.236 kb on - strand, within CA264_19745 at 4557.269 kb on + strand, within CA264_19745 at 4557.287 kb on - strand, within CA264_19745 at 4557.299 kb on - strand, within CA264_19745 at 4557.635 kb on + strand, within CA264_19745 at 4557.636 kb on - strand, within CA264_19745 at 4557.636 kb on - strand, within CA264_19745 at 4557.637 kb on + strand, within CA264_19745 at 4557.682 kb on - strand, within CA264_19745 at 4557.682 kb on - strand, within CA264_19745 at 4557.682 kb on - strand, within CA264_19745 at 4557.682 kb on - strand, within CA264_19745 at 4557.750 kb on + strand, within CA264_19745 at 4557.750 kb on + strand, within CA264_19745 at 4557.751 kb on - strand, within CA264_19745 at 4557.751 kb on - strand, within CA264_19745 at 4557.807 kb on + strand, within CA264_19745
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,555,593 - CA264_19730 0.84 -0.2 4,555,637 + CA264_19730 0.86 +0.0 4,555,638 - CA264_19730 0.86 +0.8 4,555,745 + +0.8 4,555,746 - +0.6 4,555,746 - +1.0 4,555,758 - -0.6 4,555,781 + -0.3 4,555,781 + -0.6 4,555,782 - +0.2 4,555,782 - +0.1 4,555,814 + -0.1 4,555,814 + -0.1 4,555,815 - -0.7 4,555,836 + +0.9 4,555,837 - +0.5 4,555,837 - +0.4 4,555,837 - +0.4 4,555,842 + +0.1 4,555,842 + +0.6 4,555,842 + +0.9 4,555,842 + +0.2 4,555,843 - +1.1 4,555,861 - +0.2 4,555,933 + +0.1 4,555,933 + -0.3 4,555,939 + +0.6 4,555,940 - -0.3 4,555,940 - -0.7 4,555,956 + -0.4 4,556,006 - -0.5 4,556,035 + -1.3 4,556,036 - +0.1 4,556,036 - +1.3 4,556,109 + +0.4 4,556,110 - -1.0 4,556,110 - -1.2 4,556,122 + -0.2 4,556,122 + -0.2 4,556,123 - -0.6 4,556,525 + +0.5 4,556,679 + CA264_19740 0.46 -0.9 4,556,709 - CA264_19740 0.55 -0.1 4,556,744 + CA264_19740 0.65 -0.7 4,556,868 + +1.1 4,556,869 - -0.3 4,556,938 + +0.1 4,556,976 + -0.4 4,556,977 - +0.2 4,556,978 + -0.3 4,556,979 - -1.7 4,556,979 - +0.8 4,556,991 - -0.4 4,557,014 - -0.4 4,557,031 + -1.7 4,557,031 + +1.0 4,557,031 + -1.4 4,557,032 - -1.7 4,557,097 + -0.9 4,557,098 - -0.4 4,557,100 - CA264_19745 0.10 -2.1 4,557,100 - CA264_19745 0.10 -0.0 4,557,100 - CA264_19745 0.10 +0.6 4,557,125 - CA264_19745 0.11 -0.0 4,557,125 - CA264_19745 0.11 -0.8 4,557,130 + CA264_19745 0.11 -1.6 4,557,130 + CA264_19745 0.11 +0.1 4,557,131 - CA264_19745 0.11 -0.3 4,557,131 - CA264_19745 0.11 -1.4 4,557,131 - CA264_19745 0.11 -0.0 4,557,133 + CA264_19745 0.12 -0.8 4,557,134 - CA264_19745 0.12 -0.2 4,557,158 - CA264_19745 0.13 +1.4 4,557,206 - CA264_19745 0.15 +0.1 4,557,224 + CA264_19745 0.16 +1.4 4,557,225 - CA264_19745 0.16 -0.3 4,557,230 + CA264_19745 0.16 -0.6 4,557,230 + CA264_19745 0.16 -1.9 4,557,231 - CA264_19745 0.16 -0.2 4,557,231 - CA264_19745 0.16 -0.7 4,557,232 + CA264_19745 0.16 -1.3 4,557,232 + CA264_19745 0.16 -1.1 4,557,232 + CA264_19745 0.16 -1.2 4,557,233 - CA264_19745 0.16 -0.9 4,557,235 + CA264_19745 0.16 +0.4 4,557,235 + CA264_19745 0.16 -1.4 4,557,236 - CA264_19745 0.16 -0.3 4,557,236 - CA264_19745 0.16 -0.2 4,557,236 - CA264_19745 0.16 +0.9 4,557,269 + CA264_19745 0.18 +0.4 4,557,287 - CA264_19745 0.19 -0.5 4,557,299 - CA264_19745 0.19 -0.1 4,557,635 + CA264_19745 0.35 -0.2 4,557,636 - CA264_19745 0.35 +0.1 4,557,636 - CA264_19745 0.35 -0.2 4,557,637 + CA264_19745 0.35 -1.2 4,557,682 - CA264_19745 0.37 -0.6 4,557,682 - CA264_19745 0.37 -0.3 4,557,682 - CA264_19745 0.37 -0.5 4,557,682 - CA264_19745 0.37 -0.4 4,557,750 + CA264_19745 0.40 +3.0 4,557,750 + CA264_19745 0.40 +2.3 4,557,751 - CA264_19745 0.40 -1.3 4,557,751 - CA264_19745 0.40 -0.6 4,557,807 + CA264_19745 0.43 +2.5
Or see this region's nucleotide sequence