Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_18410 and CA264_18415 are separated by 246 nucleotides CA264_18415 and CA264_18420 are separated by 421 nucleotides CA264_18420 and CA264_18425 are separated by 173 nucleotides
CA264_18410: CA264_18410 - glycine dehydrogenase (aminomethyl-transferring), at 4,280,934 to 4,283,852
_18410
CA264_18415: CA264_18415 - alanine dehydrogenase, at 4,284,099 to 4,285,343
_18415
CA264_18420: CA264_18420 - hypothetical protein, at 4,285,765 to 4,286,028
_18420
CA264_18425: CA264_18425 - 16S ribosomal RNA, at 4,286,202 to 4,287,722
_18425
Position (kb)
4284
4285
4286 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 4283.165 kb on + strand, within CA264_18410 at 4283.569 kb on - strand at 4283.619 kb on - strand at 4283.862 kb on - strand at 4283.862 kb on - strand at 4283.864 kb on - strand at 4283.864 kb on - strand at 4283.866 kb on + strand at 4283.866 kb on + strand at 4283.866 kb on + strand at 4283.866 kb on + strand at 4283.866 kb on + strand at 4283.867 kb on - strand at 4283.867 kb on - strand at 4283.867 kb on - strand at 4283.915 kb on + strand at 4283.939 kb on + strand at 4283.942 kb on + strand at 4283.945 kb on + strand at 4283.950 kb on + strand at 4283.951 kb on - strand at 4283.953 kb on + strand at 4283.953 kb on + strand at 4283.955 kb on + strand at 4283.955 kb on + strand at 4283.997 kb on + strand at 4284.060 kb on - strand at 4284.092 kb on + strand at 4284.109 kb on + strand at 4284.110 kb on - strand at 4284.124 kb on + strand at 4284.124 kb on + strand at 4284.149 kb on + strand at 4284.450 kb on + strand, within CA264_18415 at 4284.450 kb on + strand, within CA264_18415 at 4284.509 kb on + strand, within CA264_18415 at 4284.510 kb on - strand, within CA264_18415 at 4284.510 kb on - strand, within CA264_18415 at 4284.522 kb on + strand, within CA264_18415 at 4284.523 kb on - strand, within CA264_18415 at 4284.541 kb on - strand, within CA264_18415 at 4284.563 kb on + strand, within CA264_18415 at 4284.564 kb on - strand, within CA264_18415 at 4284.579 kb on + strand, within CA264_18415 at 4284.580 kb on - strand, within CA264_18415 at 4284.615 kb on + strand, within CA264_18415 at 4284.738 kb on + strand, within CA264_18415 at 4284.763 kb on + strand, within CA264_18415 at 4284.763 kb on - strand, within CA264_18415 at 4284.812 kb on - strand, within CA264_18415 at 4284.847 kb on + strand, within CA264_18415 at 4284.847 kb on + strand, within CA264_18415 at 4284.847 kb on + strand, within CA264_18415 at 4284.847 kb on + strand, within CA264_18415 at 4284.847 kb on + strand, within CA264_18415 at 4284.848 kb on - strand, within CA264_18415 at 4284.848 kb on - strand, within CA264_18415 at 4284.849 kb on + strand, within CA264_18415 at 4284.850 kb on - strand, within CA264_18415 at 4284.851 kb on + strand, within CA264_18415 at 4284.851 kb on + strand, within CA264_18415 at 4284.851 kb on + strand, within CA264_18415 at 4284.852 kb on - strand, within CA264_18415 at 4284.852 kb on - strand, within CA264_18415 at 4284.852 kb on - strand, within CA264_18415 at 4284.857 kb on + strand, within CA264_18415 at 4284.858 kb on - strand, within CA264_18415 at 4285.010 kb on + strand, within CA264_18415 at 4285.010 kb on + strand, within CA264_18415 at 4285.011 kb on - strand, within CA264_18415 at 4285.184 kb on + strand, within CA264_18415 at 4285.186 kb on + strand, within CA264_18415 at 4285.186 kb on + strand, within CA264_18415 at 4285.187 kb on - strand, within CA264_18415 at 4285.187 kb on - strand, within CA264_18415 at 4285.190 kb on + strand, within CA264_18415 at 4285.191 kb on - strand, within CA264_18415 at 4285.191 kb on - strand, within CA264_18415 at 4285.191 kb on - strand, within CA264_18415 at 4285.191 kb on - strand, within CA264_18415 at 4285.229 kb on + strand at 4285.285 kb on - strand at 4285.285 kb on - strand at 4285.297 kb on - strand at 4285.319 kb on + strand at 4285.339 kb on + strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.345 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.347 kb on - strand at 4285.350 kb on - strand at 4285.350 kb on - strand at 4285.352 kb on - strand at 4285.355 kb on - strand at 4285.360 kb on - strand at 4285.362 kb on - strand at 4285.362 kb on - strand at 4285.365 kb on - strand at 4285.365 kb on - strand at 4285.367 kb on - strand at 4285.367 kb on - strand at 4285.372 kb on - strand at 4285.372 kb on - strand at 4285.375 kb on - strand at 4285.375 kb on - strand at 4285.386 kb on + strand at 4285.394 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.396 kb on + strand at 4285.399 kb on + strand at 4285.399 kb on + strand at 4285.399 kb on + strand at 4285.401 kb on + strand at 4285.401 kb on + strand at 4285.404 kb on + strand at 4285.404 kb on + strand at 4285.406 kb on + strand at 4285.406 kb on + strand at 4285.409 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.411 kb on + strand at 4285.414 kb on + strand at 4285.414 kb on + strand at 4285.416 kb on + strand at 4285.416 kb on + strand at 4285.419 kb on + strand at 4285.436 kb on + strand at 4285.436 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,283,165 + CA264_18410 0.76 -0.4 4,283,569 - -0.8 4,283,619 - +0.9 4,283,862 - -0.8 4,283,862 - -0.5 4,283,864 - +0.9 4,283,864 - +1.4 4,283,866 + -0.3 4,283,866 + +0.0 4,283,866 + +0.8 4,283,866 + +0.2 4,283,866 + -0.6 4,283,867 - +0.8 4,283,867 - -0.1 4,283,867 - -1.3 4,283,915 + +0.1 4,283,939 + -0.2 4,283,942 + -1.0 4,283,945 + -1.8 4,283,950 + -0.3 4,283,951 - -0.7 4,283,953 + -0.0 4,283,953 + -1.3 4,283,955 + -0.0 4,283,955 + -0.2 4,283,997 + -0.5 4,284,060 - -1.0 4,284,092 + +1.2 4,284,109 + +1.3 4,284,110 - -0.7 4,284,124 + +0.1 4,284,124 + +0.5 4,284,149 + -0.3 4,284,450 + CA264_18415 0.28 -0.3 4,284,450 + CA264_18415 0.28 -0.5 4,284,509 + CA264_18415 0.33 -0.2 4,284,510 - CA264_18415 0.33 -2.1 4,284,510 - CA264_18415 0.33 -0.9 4,284,522 + CA264_18415 0.34 +1.5 4,284,523 - CA264_18415 0.34 -0.2 4,284,541 - CA264_18415 0.36 -0.5 4,284,563 + CA264_18415 0.37 +1.0 4,284,564 - CA264_18415 0.37 -0.6 4,284,579 + CA264_18415 0.39 -3.2 4,284,580 - CA264_18415 0.39 -0.6 4,284,615 + CA264_18415 0.41 -0.2 4,284,738 + CA264_18415 0.51 -0.3 4,284,763 + CA264_18415 0.53 +0.3 4,284,763 - CA264_18415 0.53 -0.0 4,284,812 - CA264_18415 0.57 +0.1 4,284,847 + CA264_18415 0.60 -1.0 4,284,847 + CA264_18415 0.60 -0.3 4,284,847 + CA264_18415 0.60 +1.3 4,284,847 + CA264_18415 0.60 +0.1 4,284,847 + CA264_18415 0.60 +0.2 4,284,848 - CA264_18415 0.60 +0.6 4,284,848 - CA264_18415 0.60 -1.4 4,284,849 + CA264_18415 0.60 +0.5 4,284,850 - CA264_18415 0.60 -2.2 4,284,851 + CA264_18415 0.60 +0.9 4,284,851 + CA264_18415 0.60 -0.5 4,284,851 + CA264_18415 0.60 +0.3 4,284,852 - CA264_18415 0.60 +0.1 4,284,852 - CA264_18415 0.60 -1.7 4,284,852 - CA264_18415 0.60 -1.2 4,284,857 + CA264_18415 0.61 +0.7 4,284,858 - CA264_18415 0.61 -0.1 4,285,010 + CA264_18415 0.73 +1.0 4,285,010 + CA264_18415 0.73 +1.0 4,285,011 - CA264_18415 0.73 +0.8 4,285,184 + CA264_18415 0.87 +1.4 4,285,186 + CA264_18415 0.87 +2.3 4,285,186 + CA264_18415 0.87 -2.5 4,285,187 - CA264_18415 0.87 -0.2 4,285,187 - CA264_18415 0.87 +1.5 4,285,190 + CA264_18415 0.88 +0.3 4,285,191 - CA264_18415 0.88 +0.3 4,285,191 - CA264_18415 0.88 -2.3 4,285,191 - CA264_18415 0.88 -0.2 4,285,191 - CA264_18415 0.88 +0.7 4,285,229 + -1.1 4,285,285 - -0.3 4,285,285 - +1.5 4,285,297 - +0.8 4,285,319 + -0.3 4,285,339 + +0.1 4,285,345 - +0.1 4,285,345 - -0.4 4,285,345 - +0.7 4,285,345 - -0.1 4,285,345 - -1.3 4,285,345 - +0.3 4,285,347 - +1.3 4,285,347 - -0.7 4,285,347 - -0.2 4,285,347 - +0.4 4,285,347 - -1.2 4,285,350 - -0.9 4,285,350 - -0.9 4,285,352 - -1.0 4,285,355 - +0.2 4,285,360 - +0.6 4,285,362 - -1.0 4,285,362 - -0.6 4,285,365 - +0.2 4,285,365 - -1.2 4,285,367 - -0.3 4,285,367 - +0.6 4,285,372 - +0.3 4,285,372 - +0.0 4,285,375 - -0.2 4,285,375 - +0.6 4,285,386 + -0.7 4,285,394 + -0.1 4,285,396 + +0.1 4,285,396 + -0.1 4,285,396 + +0.1 4,285,396 + -1.3 4,285,396 + -0.1 4,285,396 + -0.3 4,285,399 + -0.1 4,285,399 + -0.5 4,285,399 + -0.4 4,285,401 + -0.4 4,285,401 + +0.2 4,285,404 + -0.4 4,285,404 + +1.9 4,285,406 + +0.7 4,285,406 + +0.0 4,285,409 + -3.8 4,285,411 + -0.7 4,285,411 + +0.7 4,285,411 + -0.2 4,285,411 + -0.4 4,285,414 + -0.1 4,285,414 + +0.9 4,285,416 + +0.3 4,285,416 + -0.3 4,285,419 + -0.1 4,285,436 + -0.4 4,285,436 + +1.3
Or see this region's nucleotide sequence