Experiment: m.b. Chloride 750 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17990 and CA264_17995 are separated by 135 nucleotides CA264_17995 and CA264_18000 are separated by 299 nucleotides
CA264_17990: CA264_17990 - nitric oxide dioxygenase, at 4,182,216 to 4,183,427
_17990
CA264_17995: CA264_17995 - 2-hydroxymuconic semialdehyde dehydrogenase, at 4,183,563 to 4,185,008
_17995
CA264_18000: CA264_18000 - short-chain dehydrogenase, at 4,185,308 to 4,186,096
_18000
Position (kb)
4183
4184
4185
4186 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4182.619 kb on - strand, within CA264_17990 at 4182.649 kb on - strand, within CA264_17990 at 4182.678 kb on + strand, within CA264_17990 at 4182.678 kb on + strand, within CA264_17990 at 4182.778 kb on + strand, within CA264_17990 at 4182.808 kb on + strand, within CA264_17990 at 4182.831 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.858 kb on + strand, within CA264_17990 at 4182.859 kb on - strand, within CA264_17990 at 4182.862 kb on + strand, within CA264_17990 at 4182.913 kb on + strand, within CA264_17990 at 4182.924 kb on - strand, within CA264_17990 at 4183.045 kb on - strand, within CA264_17990 at 4183.074 kb on + strand, within CA264_17990 at 4183.105 kb on - strand, within CA264_17990 at 4183.138 kb on - strand, within CA264_17990 at 4183.142 kb on + strand, within CA264_17990 at 4183.142 kb on + strand, within CA264_17990 at 4183.148 kb on - strand, within CA264_17990 at 4183.148 kb on - strand, within CA264_17990 at 4183.301 kb on + strand, within CA264_17990 at 4183.302 kb on - strand, within CA264_17990 at 4183.356 kb on - strand at 4183.389 kb on + strand at 4183.390 kb on - strand at 4183.401 kb on - strand at 4183.425 kb on - strand at 4183.434 kb on - strand at 4183.434 kb on - strand at 4183.434 kb on - strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.490 kb on + strand at 4183.491 kb on - strand at 4183.528 kb on + strand at 4183.744 kb on - strand, within CA264_17995 at 4183.803 kb on + strand, within CA264_17995 at 4183.880 kb on - strand, within CA264_17995 at 4183.939 kb on - strand, within CA264_17995 at 4183.999 kb on + strand, within CA264_17995 at 4184.202 kb on - strand, within CA264_17995 at 4184.286 kb on - strand, within CA264_17995 at 4184.350 kb on - strand, within CA264_17995 at 4184.354 kb on + strand, within CA264_17995 at 4184.355 kb on - strand, within CA264_17995 at 4184.380 kb on - strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.424 kb on + strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.425 kb on - strand, within CA264_17995 at 4184.458 kb on + strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.538 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.546 kb on - strand, within CA264_17995 at 4184.547 kb on + strand, within CA264_17995 at 4184.548 kb on - strand, within CA264_17995 at 4184.603 kb on + strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.604 kb on - strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.605 kb on + strand, within CA264_17995 at 4184.632 kb on + strand, within CA264_17995 at 4184.659 kb on - strand, within CA264_17995 at 4184.684 kb on + strand, within CA264_17995 at 4184.706 kb on + strand, within CA264_17995 at 4184.732 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.742 kb on + strand, within CA264_17995 at 4184.743 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.794 kb on - strand, within CA264_17995 at 4184.906 kb on + strand at 4184.915 kb on - strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.916 kb on + strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.917 kb on - strand at 4184.936 kb on + strand at 4184.937 kb on - strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.938 kb on + strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.939 kb on - strand at 4184.950 kb on + strand at 4184.974 kb on - strand at 4184.989 kb on + strand at 4185.035 kb on + strand at 4185.043 kb on - strand at 4185.055 kb on + strand at 4185.056 kb on - strand at 4185.059 kb on + strand at 4185.059 kb on + strand at 4185.060 kb on - strand at 4185.060 kb on - strand at 4185.137 kb on + strand at 4185.193 kb on - strand at 4185.218 kb on + strand at 4185.228 kb on + strand at 4185.228 kb on + strand at 4185.243 kb on + strand at 4185.243 kb on + strand at 4185.244 kb on - strand at 4185.247 kb on - strand at 4185.247 kb on - strand at 4185.253 kb on + strand at 4185.336 kb on - strand at 4185.360 kb on + strand at 4185.458 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.505 kb on + strand, within CA264_18000 at 4185.511 kb on + strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.512 kb on - strand, within CA264_18000 at 4185.552 kb on - strand, within CA264_18000 at 4185.560 kb on - strand, within CA264_18000 at 4185.657 kb on - strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.706 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.708 kb on + strand, within CA264_18000 at 4185.709 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.792 kb on - strand, within CA264_18000 at 4185.835 kb on + strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.836 kb on - strand, within CA264_18000 at 4185.848 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.915 kb on + strand, within CA264_18000 at 4185.995 kb on - strand, within CA264_18000 at 4186.007 kb on + strand, within CA264_18000
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 750 mM remove 4,182,619 - CA264_17990 0.33 -0.4 4,182,649 - CA264_17990 0.36 -0.5 4,182,678 + CA264_17990 0.38 -0.8 4,182,678 + CA264_17990 0.38 -0.3 4,182,778 + CA264_17990 0.46 -0.2 4,182,808 + CA264_17990 0.49 +0.7 4,182,831 + CA264_17990 0.51 -0.4 4,182,858 + CA264_17990 0.53 -0.2 4,182,858 + CA264_17990 0.53 +0.5 4,182,858 + CA264_17990 0.53 -0.3 4,182,859 - CA264_17990 0.53 -0.4 4,182,862 + CA264_17990 0.53 -0.7 4,182,913 + CA264_17990 0.58 -0.2 4,182,924 - CA264_17990 0.58 +0.8 4,183,045 - CA264_17990 0.68 -0.4 4,183,074 + CA264_17990 0.71 -0.6 4,183,105 - CA264_17990 0.73 +1.9 4,183,138 - CA264_17990 0.76 +0.1 4,183,142 + CA264_17990 0.76 -0.2 4,183,142 + CA264_17990 0.76 -0.4 4,183,148 - CA264_17990 0.77 -1.8 4,183,148 - CA264_17990 0.77 -0.1 4,183,301 + CA264_17990 0.90 +0.0 4,183,302 - CA264_17990 0.90 +1.1 4,183,356 - -2.0 4,183,389 + -3.1 4,183,390 - -0.1 4,183,401 - -0.9 4,183,425 - -0.7 4,183,434 - -0.8 4,183,434 - +0.1 4,183,434 - +0.9 4,183,490 + +0.7 4,183,490 + -0.3 4,183,490 + -0.2 4,183,490 + -0.4 4,183,490 + -0.0 4,183,490 + -0.1 4,183,491 - -0.0 4,183,528 + +0.6 4,183,744 - CA264_17995 0.13 +0.5 4,183,803 + CA264_17995 0.17 -0.2 4,183,880 - CA264_17995 0.22 +0.4 4,183,939 - CA264_17995 0.26 +0.3 4,183,999 + CA264_17995 0.30 -0.1 4,184,202 - CA264_17995 0.44 -0.7 4,184,286 - CA264_17995 0.50 +1.3 4,184,350 - CA264_17995 0.54 +0.9 4,184,354 + CA264_17995 0.55 +0.6 4,184,355 - CA264_17995 0.55 +0.6 4,184,380 - CA264_17995 0.57 +1.7 4,184,424 + CA264_17995 0.60 +1.2 4,184,424 + CA264_17995 0.60 -0.0 4,184,424 + CA264_17995 0.60 -0.1 4,184,425 - CA264_17995 0.60 +0.2 4,184,425 - CA264_17995 0.60 -0.2 4,184,458 + CA264_17995 0.62 -0.8 4,184,538 - CA264_17995 0.67 -0.9 4,184,538 - CA264_17995 0.67 -0.7 4,184,538 - CA264_17995 0.67 -0.5 4,184,546 - CA264_17995 0.68 +0.6 4,184,546 - CA264_17995 0.68 +0.6 4,184,547 + CA264_17995 0.68 -0.1 4,184,548 - CA264_17995 0.68 +1.7 4,184,603 + CA264_17995 0.72 -1.1 4,184,604 - CA264_17995 0.72 +0.1 4,184,604 - CA264_17995 0.72 +1.7 4,184,604 - CA264_17995 0.72 -0.6 4,184,605 + CA264_17995 0.72 +1.1 4,184,605 + CA264_17995 0.72 +0.7 4,184,605 + CA264_17995 0.72 -0.2 4,184,632 + CA264_17995 0.74 +0.5 4,184,659 - CA264_17995 0.76 -0.3 4,184,684 + CA264_17995 0.78 +0.0 4,184,706 + CA264_17995 0.79 +0.8 4,184,732 + CA264_17995 0.81 -0.1 4,184,742 + CA264_17995 0.82 +0.3 4,184,742 + CA264_17995 0.82 -0.0 4,184,743 - CA264_17995 0.82 -1.4 4,184,794 - CA264_17995 0.85 +1.0 4,184,794 - CA264_17995 0.85 +0.0 4,184,906 + -0.5 4,184,915 - +0.5 4,184,916 + +0.3 4,184,916 + -0.7 4,184,916 + -0.6 4,184,916 + -0.3 4,184,917 - +1.3 4,184,917 - -0.3 4,184,917 - +0.9 4,184,917 - -0.2 4,184,917 - -0.0 4,184,917 - -1.3 4,184,936 + +0.4 4,184,937 - +0.6 4,184,938 + +0.3 4,184,938 + +0.7 4,184,938 + -0.9 4,184,939 - +0.0 4,184,939 - +0.4 4,184,939 - -1.4 4,184,939 - +0.7 4,184,939 - -0.5 4,184,939 - +0.9 4,184,950 + +0.1 4,184,974 - +0.2 4,184,989 + -0.0 4,185,035 + -1.2 4,185,043 - -0.5 4,185,055 + -0.1 4,185,056 - +1.2 4,185,059 + -0.8 4,185,059 + -0.4 4,185,060 - -1.0 4,185,060 - +0.3 4,185,137 + -1.4 4,185,193 - -1.7 4,185,218 + -0.0 4,185,228 + +0.0 4,185,228 + +0.2 4,185,243 + -0.7 4,185,243 + +0.3 4,185,244 - +1.2 4,185,247 - -0.0 4,185,247 - +0.3 4,185,253 + +0.9 4,185,336 - -0.3 4,185,360 + -0.1 4,185,458 + CA264_18000 0.19 -1.0 4,185,505 + CA264_18000 0.25 -0.6 4,185,505 + CA264_18000 0.25 +1.2 4,185,511 + CA264_18000 0.26 -1.1 4,185,512 - CA264_18000 0.26 -0.5 4,185,512 - CA264_18000 0.26 -0.1 4,185,552 - CA264_18000 0.31 -0.2 4,185,560 - CA264_18000 0.32 +1.3 4,185,657 - CA264_18000 0.44 +0.7 4,185,706 + CA264_18000 0.50 +0.3 4,185,706 + CA264_18000 0.50 -2.0 4,185,708 + CA264_18000 0.51 -0.3 4,185,708 + CA264_18000 0.51 +0.4 4,185,709 - CA264_18000 0.51 -0.4 4,185,792 - CA264_18000 0.61 +0.5 4,185,792 - CA264_18000 0.61 +0.0 4,185,835 + CA264_18000 0.67 -0.5 4,185,836 - CA264_18000 0.67 -0.4 4,185,836 - CA264_18000 0.67 -2.5 4,185,836 - CA264_18000 0.67 -0.2 4,185,836 - CA264_18000 0.67 -1.4 4,185,848 + CA264_18000 0.68 -0.7 4,185,915 + CA264_18000 0.77 -0.1 4,185,915 + CA264_18000 0.77 +0.3 4,185,995 - CA264_18000 0.87 -0.6 4,186,007 + CA264_18000 0.89 -0.8
Or see this region's nucleotide sequence